BLASTX nr result
ID: Ephedra26_contig00006970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00006970
(506 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006844882.1| hypothetical protein AMTR_s00058p00122560 [A... 70 4e-10
ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr... 63 4e-08
gb|ABR16635.1| unknown [Picea sitchensis] 63 4e-08
gb|EXB53735.1| Protein brittle-1 [Morus notabilis] 62 8e-08
emb|CBI40495.3| unnamed protein product [Vitis vinifera] 62 8e-08
ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory pr... 62 8e-08
emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera] 62 8e-08
gb|AFK36394.1| unknown [Lotus japonicus] 60 3e-07
ref|NP_001054315.1| Os04g0685100 [Oryza sativa Japonica Group] g... 60 4e-07
gb|EEC78285.1| hypothetical protein OsI_17991 [Oryza sativa Indi... 60 4e-07
emb|CAJ86168.1| H0913C04.9 [Oryza sativa Indica Group] 60 4e-07
ref|XP_006653899.1| PREDICTED: ribosome biogenesis regulatory pr... 59 5e-07
gb|EXC33018.1| Ribosome biogenesis regulatory-like protein [Moru... 59 9e-07
ref|XP_006450951.1| hypothetical protein CICLE_v10008881mg [Citr... 59 9e-07
ref|XP_002306885.2| hypothetical protein POPTR_0005s25260g [Popu... 59 9e-07
ref|XP_006383715.1| hypothetical protein POPTR_0005s25260g [Popu... 59 9e-07
gb|EOY31033.1| Ribosome biogenesis regulatory protein (RRS1) fam... 58 1e-06
gb|EOY31032.1| Ribosome biogenesis regulatory protein (RRS1) fam... 58 1e-06
ref|XP_003569038.1| PREDICTED: ribosome biogenesis regulatory pr... 58 1e-06
ref|XP_003593202.1| Ribosome biogenesis regulatory protein-like ... 57 2e-06
>ref|XP_006844882.1| hypothetical protein AMTR_s00058p00122560 [Amborella trichopoda]
gi|548847373|gb|ERN06557.1| hypothetical protein
AMTR_s00058p00122560 [Amborella trichopoda]
Length = 314
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG G+GNQE+QQSEKVL+++LS HS +LDVNKAVS+ KV +E +
Sbjct: 238 PVVEGKGMGNQERQQSEKVLSQLLSKHSHEILDVNKAVSMFKVKEEKKRKQRDTLSTSAK 297
Query: 182 GKHKGKKRYQSTNAKQK 232
K +K ++ ++ K +
Sbjct: 298 SKPSKRKSFKKSSKKAR 314
>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
product [Vitis vinifera]
Length = 327
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG+G+G+ EKQQ+EK+LNK++S +S +L+V+KA+++ V E +
Sbjct: 243 PVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNVKKEKKRKNRQGKDSSTS 302
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQK 256
K K KK+ Q + K+ GK K
Sbjct: 303 SKLKPKKQLQKKSLKKGTSKKGKSK 327
>gb|ABR16635.1| unknown [Picea sitchensis]
Length = 343
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDE 139
PV EGSG+G++EKQQ EKVL K+LSSH+ +L+V+KAV V VN+E
Sbjct: 249 PVVEGSGIGSREKQQCEKVLQKVLSSHNHDILNVDKAVKVFTVNEE 294
>gb|EXB53735.1| Protein brittle-1 [Morus notabilis]
Length = 819
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG G+G+QE+ Q+EKVLNK+ S +S ML+VNKAV++ V E
Sbjct: 308 PVVEGKGMGSQERAQTEKVLNKLFSKNSHEMLNVNKAVNMYNVKKEK------------- 354
Query: 182 GKHKGKKRYQS-TNAKQKERYTGKQKYQNKSKSK 280
K K K+ S +++K K + T K+K NK SK
Sbjct: 355 -KRKNKEGKSSPSSSKLKPKKTLKKKPLNKGSSK 387
>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/91 (37%), Positives = 53/91 (58%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG+G+G+QEKQQ+EKVLN+++S +S +L+V+KA+++ V E +
Sbjct: 243 PVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQRGKDSSTS 302
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKSK 274
K K KK+ Q + K+ G + KSK
Sbjct: 303 SKLKPKKQLQKKSLKK-----GGSSKKGKSK 328
>ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
vinifera]
Length = 331
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/91 (37%), Positives = 53/91 (58%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG+G+G+QEKQQ+EKVLN+++S +S +L+V+KA+++ V E +
Sbjct: 246 PVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQRGKDSSTS 305
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKSK 274
K K KK+ Q + K+ G + KSK
Sbjct: 306 SKLKPKKQLQKKSLKK-----GGSSKKGKSK 331
>emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]
Length = 327
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/91 (37%), Positives = 53/91 (58%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG+G+G+QEKQQ+EKVLN+++S +S +L+V+KA+++ V E +
Sbjct: 242 PVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNVKKEKKRKNQRGKDSSTS 301
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKSK 274
K K KK+ Q + K+ G + KSK
Sbjct: 302 SKLKPKKQLQKKSLKK-----GGSSKKGKSK 327
>gb|AFK36394.1| unknown [Lotus japonicus]
Length = 351
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/92 (39%), Positives = 53/92 (57%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PVAEG+G+G+ E+QQ+EK+LNKI+S +S +L+VNKAV+V V E
Sbjct: 250 PVAEGTGMGSLERQQTEKILNKIMSKNSHDILNVNKAVTVQTVKKEKK------------ 297
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKSKS 277
++ K R ST++K K + +K K S
Sbjct: 298 -RNNDKARASSTDSKLKPKKKPFKKGDFKKSS 328
>ref|NP_001054315.1| Os04g0685100 [Oryza sativa Japonica Group]
gi|32488712|emb|CAE03455.1| OSJNBa0088H09.13 [Oryza
sativa Japonica Group] gi|113565886|dbj|BAF16229.1|
Os04g0685100 [Oryza sativa Japonica Group]
gi|222629808|gb|EEE61940.1| hypothetical protein
OsJ_16692 [Oryza sativa Japonica Group]
Length = 330
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG G+GNQEKQQ++K+LN +L+ SE +DV +A+++ KV E
Sbjct: 254 PVVEGKGMGNQEKQQNDKILNALLAKSSEDQMDVGRAITMYKVKKEKQ------------ 301
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKS 271
+ K K++ S+N + ++ T K+ + K+
Sbjct: 302 -RRKDKEKSSSSNKLKPQKKTLKKSSKKKA 330
>gb|EEC78285.1| hypothetical protein OsI_17991 [Oryza sativa Indica Group]
Length = 291
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG G+GNQEKQQ++K+LN +L+ SE +DV +A+++ KV E
Sbjct: 215 PVVEGKGMGNQEKQQNDKILNALLAKSSEDQMDVGRAITMYKVKKEKQ------------ 262
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKS 271
+ K K++ S+N + ++ T K+ + K+
Sbjct: 263 -RRKDKEKSSSSNKLKPQKKTLKKSSKKKA 291
>emb|CAJ86168.1| H0913C04.9 [Oryza sativa Indica Group]
Length = 332
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG G+GNQEKQQ++K+LN +L+ SE +DV +A+++ KV E
Sbjct: 256 PVVEGKGMGNQEKQQNDKILNALLAKSSEDQMDVGRAITMYKVKKEKQ------------ 303
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKS 271
+ K K++ S+N + ++ T K+ + K+
Sbjct: 304 -RRKDKEKSSSSNKLKPQKKTLKKSSKKKA 332
>ref|XP_006653899.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Oryza
brachyantha]
Length = 307
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/97 (36%), Positives = 48/97 (49%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PVAEG G+GNQEKQQ++K+LN +L+ SE +DV +A+++ KV
Sbjct: 231 PVAEGKGMGNQEKQQNDKILNALLAKSSEDQMDVGRAITMYKV----------------- 273
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKSKSKHPRK 292
KK Q K+K K K Q K K +K
Sbjct: 274 -----KKEKQRKKDKEKSSSANKLKPQKKPLKKSSKK 305
>gb|EXC33018.1| Ribosome biogenesis regulatory-like protein [Morus notabilis]
Length = 332
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG G+ +QE++Q+EKVLNK+ S +S ML+VNKAV++ V E
Sbjct: 248 PVVEGKGMVSQEREQTEKVLNKLFSKNSHEMLNVNKAVNMYNVKKEK------------- 294
Query: 182 GKHKGKKRYQS-TNAKQKERYTGKQKYQNKSKSK 280
K K K+ S +++K K T K+K NK SK
Sbjct: 295 -KWKNKEGKSSPSSSKLKPNKTLKKKSLNKGSSK 327
>ref|XP_006450951.1| hypothetical protein CICLE_v10008881mg [Citrus clementina]
gi|568843880|ref|XP_006475826.1| PREDICTED: ribosome
biogenesis regulatory protein homolog [Citrus sinensis]
gi|557554177|gb|ESR64191.1| hypothetical protein
CICLE_v10008881mg [Citrus clementina]
Length = 333
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDE-----XXXXXXXXX 166
PV EGSG+G++EK+Q++KVLNK+ S HS +L+V KAV+ V E
Sbjct: 244 PVVEGSGIGSREKEQTDKVLNKLFSKHSHEILNVEKAVTAYNVKREKKQRLKHNKNVEDK 303
Query: 167 XXXSMGKHKGKKRYQSTNAKQKERYTGKQK 256
+ K K KK+ +AK+ GK K
Sbjct: 304 SLSTSNKLKPKKQLNKKSAKKGSSKKGKAK 333
>ref|XP_002306885.2| hypothetical protein POPTR_0005s25260g [Populus trichocarpa]
gi|550339710|gb|EEE93881.2| hypothetical protein
POPTR_0005s25260g [Populus trichocarpa]
Length = 360
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EGSG+G+QEK+Q+++VL+K++SS+S +L+V+KAV++ VN E
Sbjct: 244 PVVEGSGIGSQEKEQTDRVLSKLISSNSHEILNVDKAVTMYNVNKER------------- 290
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKSKS 277
K + + S+ K++ + + + Q KS S
Sbjct: 291 -KRRNQYGKPSSTRKEQGKSSSTRNEQGKSSS 321
>ref|XP_006383715.1| hypothetical protein POPTR_0005s25260g [Populus trichocarpa]
gi|550339711|gb|ERP61512.1| hypothetical protein
POPTR_0005s25260g [Populus trichocarpa]
Length = 360
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EGSG+G+QEK+Q+++VL+K++SS+S +L+V+KAV++ VN E
Sbjct: 244 PVVEGSGIGSQEKEQTDRVLSKLISSNSHEILNVDKAVTMYNVNKER------------- 290
Query: 182 GKHKGKKRYQSTNAKQKERYTGKQKYQNKSKS 277
K + + S+ K++ + + + Q KS S
Sbjct: 291 -KRRNQYGKPSSTRKEQGKSSSTRNEQGKSSS 321
>gb|EOY31033.1| Ribosome biogenesis regulatory protein (RRS1) family protein
isoform 2 [Theobroma cacao]
Length = 335
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXS- 178
PV EGSG+G++EK+Q+E VLNK++S HS +L+V+KAV++ V E S
Sbjct: 246 PVVEGSGIGSREKEQTENVLNKLISKHSHEILNVDKAVTMYNVKKEKKARNRKNQEGKSS 305
Query: 179 --MGKHKGKKRYQSTNAKQKERYTGKQK 256
K K KK+ AK+ + K K
Sbjct: 306 SGSNKLKPKKQLHKKTAKKGSGSSKKGK 333
>gb|EOY31032.1| Ribosome biogenesis regulatory protein (RRS1) family protein
isoform 1 [Theobroma cacao]
Length = 334
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXS- 178
PV EGSG+G++EK+Q+E VLNK++S HS +L+V+KAV++ V E S
Sbjct: 245 PVVEGSGIGSREKEQTENVLNKLISKHSHEILNVDKAVTMYNVKKEKKARNRKNQEGKSS 304
Query: 179 --MGKHKGKKRYQSTNAKQKERYTGKQK 256
K K KK+ AK+ + K K
Sbjct: 305 SGSNKLKPKKQLHKKTAKKGSGSSKKGK 332
>ref|XP_003569038.1| PREDICTED: ribosome biogenesis regulatory protein homolog
[Brachypodium distachyon]
Length = 332
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PV EG G+GN EKQQ++K+LN +L+ + E LDV+KA+++ KV + S
Sbjct: 254 PVVEGKGMGNLEKQQNDKILNSLLAKNFEEPLDVSKAITMYKVKKDNKRRKEKQSSSGSN 313
Query: 182 GKHKGKKRYQSTNAKQ 229
K K +K+ Q ++K+
Sbjct: 314 KKLKPQKKLQKKSSKK 329
>ref|XP_003593202.1| Ribosome biogenesis regulatory protein-like protein [Medicago
truncatula] gi|355482250|gb|AES63453.1| Ribosome
biogenesis regulatory protein-like protein [Medicago
truncatula]
Length = 327
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +2
Query: 2 PVAEGSGVGNQEKQQSEKVLNKILSSHSETMLDVNKAVSVMKVNDEXXXXXXXXXXXXSM 181
PVAEG+GVG++E++Q+E +LNKI+S ++ +L+VNKAV+V V E
Sbjct: 245 PVAEGTGVGSKEREQTENILNKIMSKNNHDILNVNKAVTVTNVKME-------------K 291
Query: 182 GKHKGKKRYQSTNAKQK 232
+ K + STN+K K
Sbjct: 292 NRRNDKSKASSTNSKFK 308