BLASTX nr result

ID: Ephedra26_contig00006960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006960
         (1637 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25572.1| unknown [Picea sitchensis]                             145   4e-32
ref|XP_006827625.1| hypothetical protein AMTR_s00009p00243860 [A...    76   5e-11
gb|ADE77234.1| unknown [Picea sitchensis]                              71   1e-09

>gb|ABK25572.1| unknown [Picea sitchensis]
          Length = 220

 Score =  145 bits (367), Expect = 4e-32
 Identities = 88/176 (50%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
 Frame = +3

Query: 894  VSTRVIHAEGNHGSSGASRRHKRNGRSKSWWGLCXXXXXXXXXXXXXXXXXXXXXXXXXX 1073
            VSTRVI     H SS   RRHKRN RSKSWWGLC                          
Sbjct: 58   VSTRVIDGR-EHPSSETPRRHKRNSRSKSWWGLCGSSGGCDEGNMAPSLGQFLEVERRVA 116

Query: 1074 XXXXXXXASTRREKMYFNMVYDEFTAGSTMLDANPLFADGHILPPHSSTVDPYNFAGANG 1253
                   AS RREKMY NM+YDEF AG T  D+NPLFADG ILPP      P +   +  
Sbjct: 117  -------ASNRREKMYLNMMYDEFAAGQTAFDSNPLFADGQILPP-----PPADQIPSVS 164

Query: 1254 HDQGEGQPSWALADFF-NEAPSRSSSV--GHQRHHSIGSKVPTLLSGICGRTSIEA 1412
             DQ +  PSWA A++F ++A SR SSV   H R+HS+GS+VPT  SGICGRTSIEA
Sbjct: 165  RDQADIHPSWAPAEWFTSDANSRRSSVRAHHHRNHSLGSRVPTFFSGICGRTSIEA 220


>ref|XP_006827625.1| hypothetical protein AMTR_s00009p00243860 [Amborella trichopoda]
            gi|548832245|gb|ERM95041.1| hypothetical protein
            AMTR_s00009p00243860 [Amborella trichopoda]
          Length = 221

 Score = 75.9 bits (185), Expect = 5e-11
 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = +3

Query: 1095 ASTRREKMYFNMVYDEFTAGSTMLDANPLFADGHILPPHSSTVDPYNFAGANGHDQGEGQ 1274
            A  +REK+Y N +Y++ TA +T+ + NPLF++G ++PP S          + G+     Q
Sbjct: 136  AHNKREKLYINFMYEDLTASNTIFETNPLFSEGRVVPPQS--------MNSQGNPPSVLQ 187

Query: 1275 PSWALADFFNEAPSRSSSVGHQR--HHSIGSKVPTLLSGICGRTSIEA 1412
            P W L+              H R   ++ GS+VPTLLS ICGRTSI+A
Sbjct: 188  PDWLLS--------------HDRLERNTFGSRVPTLLSSICGRTSIKA 221


>gb|ADE77234.1| unknown [Picea sitchensis]
          Length = 249

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 51/153 (33%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
 Frame = +3

Query: 945  SRRHKRNGRSKSWWGLCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRREKMYF 1124
            SR+  R+ +SKSWW LC                                  S   E +Y 
Sbjct: 102  SRQSARSKKSKSWWRLCRDSDDYDCHRNINPSLEQFLEEERRTT------GSNIGEGIYI 155

Query: 1125 NMVYDEFTAGSTMLDANPLFADGHILPPHS--STVDPYNFAGANGHDQGEGQPSWALADF 1298
            N++YDEFTAG      N LF++G ILPPHS  S   P +        + E   SW+   F
Sbjct: 156  NIMYDEFTAGHDFSGRNLLFSEGRILPPHSAHSRQQPSSIDMV----RAESNNSWSTECF 211

Query: 1299 FNEAPSRSSSVGHQRHH---SIGSKVPTLLSGI 1388
              ++ SR  SV     H   S+GS++PTL SGI
Sbjct: 212  TRDSGSRRGSVREAHDHGNQSVGSRLPTLFSGI 244


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