BLASTX nr result

ID: Ephedra26_contig00006910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006910
         (1164 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854627.1| hypothetical protein AMTR_s00030p00173920 [A...   105   3e-20
ref|XP_002974618.1| hypothetical protein SELMODRAFT_414952 [Sela...    73   3e-10

>ref|XP_006854627.1| hypothetical protein AMTR_s00030p00173920 [Amborella trichopoda]
           gi|548858313|gb|ERN16094.1| hypothetical protein
           AMTR_s00030p00173920 [Amborella trichopoda]
          Length = 709

 Score =  105 bits (262), Expect = 3e-20
 Identities = 76/197 (38%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
 Frame = +2

Query: 284 MASYYSGANLQPDAMQTLYLTNPDYTGYADMT---NPGSMLLLNQ---SVASVPTSSNIA 445
           MA+YY G  +QPD +QTLYL NP Y GYA+ T   NPG+M+LLN    +  ++ T+ +  
Sbjct: 1   MATYYPGTEIQPDNLQTLYLMNPGYVGYAEATPSANPGNMVLLNHVNGNPLTIGTNLSQN 60

Query: 446 ASGQPHHYVGIQYPQAPSPKHSSVDSLESSGSQHGINSALLASRFR-NPGYGTWRNVGNE 622
            + QP H++GI   Q P P+   +     + +   IN  LLASR   +  Y  WRN GNE
Sbjct: 61  PNQQPQHFIGIPL-QGPDPQRQVL-----TVNPTDINPNLLASRISGHHQYNQWRNSGNE 114

Query: 623 LSFIQAADPSPLTQPLSEKITGYSAVD---HQSVSEIVPT--AIKRSNVSSVQNQQLNMN 787
           L+F+QA D S  +   S+     S+V    HQ V EI  +   I+R  ++S Q QQ    
Sbjct: 115 LTFLQAIDQSQASTNPSQIANMNSSVSLSHHQPVQEITNSQMGIRRGPMASDQTQQ---- 170

Query: 788 SNAISLQLDQSHVSEAQ 838
             A+SL L     S  Q
Sbjct: 171 -GALSLSLSSQQPSNGQ 186


>ref|XP_002974618.1| hypothetical protein SELMODRAFT_414952 [Selaginella moellendorffii]
            gi|300157513|gb|EFJ24138.1| hypothetical protein
            SELMODRAFT_414952 [Selaginella moellendorffii]
          Length = 1125

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 7/300 (2%)
 Frame = +2

Query: 284  MASYYSGAN-LQPDAMQTLYLTNPDYTGYADMTNPGSMLLLNQSVASVPTSSNIAASGQ- 457
            M SY SG N  Q +AMQ L+LT   Y+GY+D + PG M+L++ S  S   SS +  S   
Sbjct: 252  MTSYLSGQNSAQAEAMQ-LFLTG--YSGYSDPSTPGGMVLISPSSGSSVQSSQLTGSAPG 308

Query: 458  PHHYVGIQYPQAPSPKHSSVDSLESSGSQHGINSALLASRFRNPGYGTWRNVGNELSFIQ 637
              H++GI   Q       S+   ++SG  +G+ S+  ASR        WRN G+E  F+ 
Sbjct: 309  QSHFIGIPLTQ------PSLSQQDASGG-NGLPSSAFASRGGANSTYNWRNGGDEFLFLP 361

Query: 638  AADPSPLTQPLSEKITGYSAVDHQSVSEIVPTAIKRSNVSSV--QNQQLNMNSNAISLQL 811
            +++ +   + +S + +G +      ++E+   A+++ ++SS+  Q  Q ++      L++
Sbjct: 362  SSEATQQRKSISGEPSGIN-----QITELSDYALRQPSLSSMLGQQHQQSLLQAGHRLEM 416

Query: 812  DQSHVSEAQVHGXXXXXXXXXXXXXXXXCFQNHPSEQNVDCPSISEETSHENINMLDRIS 991
            D SH   A   G                  Q H  E  ++ P+ S++          R  
Sbjct: 417  DNSHQGAAAGPGYHQSLSLSLSNQNA----QLHAREPGMNSPAGSQDAK--------RGV 464

Query: 992  AKFSDNAGSFR-SPRDVMPATNFLTMANG--HQLDKSSQHSSNTYTPLSNSLTGSKYFRA 1162
             K S +   FR SPRD   +   L  + G  H     +    +  +   + ++GS+Y RA
Sbjct: 465  GKLSGDLSHFRTSPRDGGASYVNLPSSAGTKHSYFDVAGPGPSAVSNSFSFVSGSRYLRA 524


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