BLASTX nr result

ID: Ephedra26_contig00006687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006687
         (1044 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004303986.1| PREDICTED: uncharacterized protein At3g27210...    59   2e-06
ref|NP_566811.1| uncharacterized protein [Arabidopsis thaliana] ...    57   9e-06

>ref|XP_004303986.1| PREDICTED: uncharacterized protein At3g27210-like [Fragaria vesca
           subsp. vesca]
          Length = 235

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 45/114 (39%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
 Frame = -1

Query: 510 PQMETVNVNAGEVRT----PARMTPAA-----SGDDAFFDSLPFLESDAEDDFVTVNGDT 358
           P  E    N G   T    PAR T  A     S +DAFFDS P+L+SD EDDF +VNGD 
Sbjct: 35  PIKEKPTTNVGRPITDQWSPARSTATAFRDYGSKEDAFFDSKPWLDSDCEDDFFSVNGDF 94

Query: 357 LQS---TWSHSNNAHVTPRPSISTLKERMAKVEQWTDNPTQVQQKKKLKDFFME 205
             S   T  H N +HV   P  +     +         P+ V++KKKL D F E
Sbjct: 95  TPSRGNTPVHHNFSHVNKTPFGNRSPVSIPA-------PSPVEKKKKLADLFRE 141


>ref|NP_566811.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75273712|sp|Q9LK32.1|Y3721_ARATH RecName:
           Full=Uncharacterized protein At3g27210
           gi|9294214|dbj|BAB02116.1| unnamed protein product
           [Arabidopsis thaliana] gi|15146183|gb|AAK83575.1|
           AT3g27210/K17E12_3 [Arabidopsis thaliana]
           gi|18958056|gb|AAL79601.1| AT3g27210/K17E12_3
           [Arabidopsis thaliana] gi|332643758|gb|AEE77279.1|
           uncharacterized protein AT3G27210 [Arabidopsis thaliana]
          Length = 234

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 34/138 (24%), Positives = 64/138 (46%)
 Frame = -1

Query: 618 SPDSSGELNGNVHKTETTINNCISSSFDNQVMTHEIPQMETVNVNAGEVRTPARMTPAAS 439
           +P+S   +N N +   + ++  +  SF++   +  IP    +          +      S
Sbjct: 21  TPESQMTVNDNKNDNVSILSPSVKKSFESPRKSTSIPANNNLTPVKSRWSFSSSKKSFGS 80

Query: 438 GDDAFFDSLPFLESDAEDDFVTVNGDTLQSTWSHSNNAHVTPRPSISTLKERMAKVEQWT 259
            D+ FFDS P+L+SD++DDF +VNGD   S  +   ++     P    L     K  + +
Sbjct: 81  KDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTPKSSFSDRPPRFHNLIFHEKKPSRGS 140

Query: 258 DNPTQVQQKKKLKDFFME 205
            +P  + ++KKL + F +
Sbjct: 141 SSPAPLPRRKKLGELFRD 158


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