BLASTX nr result
ID: Ephedra26_contig00006487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00006487
(499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK21554.1| unknown [Picea sitchensis] gi|116790929|gb|ABK257... 104 1e-20
ref|XP_006444137.1| hypothetical protein CICLE_v10023059mg [Citr... 99 4e-19
ref|NP_001152698.1| snRNP core Sm protein Sm-X5-like protein [Ze... 99 4e-19
ref|XP_004972816.1| PREDICTED: U6 snRNA-associated Sm-like prote... 99 6e-19
dbj|BAC99422.1| putative snRNP core protein SMX5d [Oryza sativa ... 99 6e-19
gb|EEC82919.1| hypothetical protein OsI_27848 [Oryza sativa Indi... 99 6e-19
ref|NP_001061016.2| Os08g0154700 [Oryza sativa Japonica Group] g... 99 6e-19
gb|ABR25995.1| snrnp core sm protein sm-x5-like protein [Oryza s... 99 6e-19
ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus t... 98 1e-18
gb|ABK93861.1| unknown [Populus trichocarpa] 98 1e-18
gb|EOX94843.1| BTB-POZ and MATH domain 2 [Theobroma cacao] 97 2e-18
ref|XP_006305805.1| hypothetical protein CARUB_v10010754mg [Caps... 97 2e-18
ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ... 97 2e-18
ref|XP_001782631.1| predicted protein [Physcomitrella patens] gi... 97 3e-18
gb|EXB42565.1| hypothetical protein L484_011338 [Morus notabilis] 96 4e-18
ref|XP_006850806.1| hypothetical protein AMTR_s00025p00112530 [A... 96 4e-18
ref|XP_004493646.1| PREDICTED: U6 snRNA-associated Sm-like prote... 96 4e-18
ref|XP_004493645.1| PREDICTED: BTB/POZ and MATH domain-containin... 96 4e-18
ref|XP_004294156.1| PREDICTED: U6 snRNA-associated Sm-like prote... 96 4e-18
ref|XP_004135926.1| PREDICTED: U6 snRNA-associated Sm-like prote... 96 4e-18
>gb|ABK21554.1| unknown [Picea sitchensis] gi|116790929|gb|ABK25794.1| unknown
[Picea sitchensis]
Length = 93
Score = 104 bits (260), Expect = 1e-20
Identities = 49/50 (98%), Positives = 50/50 (100%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG
Sbjct: 44 RVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 93
>ref|XP_006444137.1| hypothetical protein CICLE_v10023059mg [Citrus clementina]
gi|568852209|ref|XP_006479772.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like [Citrus
sinensis] gi|557546399|gb|ESR57377.1| hypothetical
protein CICLE_v10023059mg [Citrus clementina]
Length = 93
Score = 99.4 bits (246), Expect = 4e-19
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPPDGVDVD+LHDATRREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPDGVDVDLLHDATRREARGG 93
>ref|NP_001152698.1| snRNP core Sm protein Sm-X5-like protein [Zea mays]
gi|195659125|gb|ACG49030.1| snRNP core Sm protein
Sm-X5-like protein [Zea mays]
gi|413917383|gb|AFW57315.1| snRNP core Sm protein
Sm-X5-like protein [Zea mays]
Length = 93
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYVLLP DGVDVDILHDATRREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDVDILHDATRREARGG 93
>ref|XP_004972816.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform X1
[Setaria italica]
Length = 125
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYVLLP DGVD+DILHDATRREARGG
Sbjct: 76 RVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG 125
>dbj|BAC99422.1| putative snRNP core protein SMX5d [Oryza sativa Japonica Group]
Length = 288
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYVLLP DGVD+DILHDATRREARGG
Sbjct: 239 RVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG 288
>gb|EEC82919.1| hypothetical protein OsI_27848 [Oryza sativa Indica Group]
Length = 120
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYVLLP DGVD+DILHDATRREARGG
Sbjct: 71 RVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG 120
>ref|NP_001061016.2| Os08g0154700 [Oryza sativa Japonica Group]
gi|242078209|ref|XP_002443873.1| hypothetical protein
SORBIDRAFT_07g003620 [Sorghum bicolor]
gi|357145002|ref|XP_003573488.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like [Brachypodium
distachyon] gi|514793449|ref|XP_004972817.1| PREDICTED:
U6 snRNA-associated Sm-like protein LSm2-like isoform X2
[Setaria italica] gi|573953710|ref|XP_006659125.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
[Oryza brachyantha] gi|195656753|gb|ACG47844.1| snRNP
core Sm protein Sm-X5-like protein [Zea mays]
gi|215769192|dbj|BAH01421.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|241940223|gb|EES13368.1| hypothetical protein
SORBIDRAFT_07g003620 [Sorghum bicolor]
gi|255678156|dbj|BAF22930.2| Os08g0154700 [Oryza sativa
Japonica Group] gi|326493970|dbj|BAJ85447.1| predicted
protein [Hordeum vulgare subsp. vulgare]
gi|326512672|dbj|BAJ99691.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326530750|dbj|BAK01173.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|413921285|gb|AFW61217.1| snRNP core Sm protein
Sm-X5-like protein [Zea mays]
Length = 93
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYVLLP DGVD+DILHDATRREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG 93
>gb|ABR25995.1| snrnp core sm protein sm-x5-like protein [Oryza sativa Indica
Group]
Length = 53
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYVLLP DGVD+DILHDATRREARGG
Sbjct: 4 RVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG 53
>ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus trichocarpa]
gi|224118384|ref|XP_002331469.1| predicted protein
[Populus trichocarpa] gi|118484877|gb|ABK94305.1|
unknown [Populus trichocarpa]
gi|222841481|gb|EEE79028.1| small nuclear
ribonucleoprotein D [Populus trichocarpa]
Length = 93
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/50 (88%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPP+GVDVD+LHDATRREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93
>gb|ABK93861.1| unknown [Populus trichocarpa]
Length = 93
Score = 97.8 bits (242), Expect = 1e-18
Identities = 44/50 (88%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPP+GVDVD+LHDATRREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93
>gb|EOX94843.1| BTB-POZ and MATH domain 2 [Theobroma cacao]
Length = 493
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPPDGVD+++LHDATRREARGG
Sbjct: 444 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARGG 493
>ref|XP_006305805.1| hypothetical protein CARUB_v10010754mg [Capsella rubella]
gi|567156028|ref|XP_006418245.1| hypothetical protein
EUTSA_v10009199mg [Eutrema salsugineum]
gi|482574516|gb|EOA38703.1| hypothetical protein
CARUB_v10010754mg [Capsella rubella]
gi|557096016|gb|ESQ36598.1| hypothetical protein
EUTSA_v10009199mg [Eutrema salsugineum]
Length = 93
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPPDGVDVD+LHDA RREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPDGVDVDLLHDAARREARGG 93
>ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
gi|223535995|gb|EEF37654.1| Speckle-type POZ protein,
putative [Ricinus communis]
Length = 500
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPP+GVD+D+LHDATRREARGG
Sbjct: 451 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500
>ref|XP_001782631.1| predicted protein [Physcomitrella patens]
gi|162665864|gb|EDQ52534.1| predicted protein
[Physcomitrella patens]
Length = 93
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+ KYPHMLSVKNCFIRGSVVRYV LPPDGVDVDILHDATRREARGG
Sbjct: 44 RVVDDTKYPHMLSVKNCFIRGSVVRYVQLPPDGVDVDILHDATRREARGG 93
>gb|EXB42565.1| hypothetical protein L484_011338 [Morus notabilis]
Length = 140
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPP+GVDV++LHDATRREARGG
Sbjct: 91 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 140
>ref|XP_006850806.1| hypothetical protein AMTR_s00025p00112530 [Amborella trichopoda]
gi|548854477|gb|ERN12387.1| hypothetical protein
AMTR_s00025p00112530 [Amborella trichopoda]
Length = 93
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/50 (86%), Positives = 48/50 (96%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYVLLPPDGVD ++LHDATRREAR G
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVLLPPDGVDTELLHDATRREARAG 93
>ref|XP_004493646.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Cicer
arietinum]
Length = 93
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPP+GVDV++LHDATRREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_004493645.1| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Cicer
arietinum]
Length = 497
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPP+GVDV++LHDATRREARGG
Sbjct: 448 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 497
>ref|XP_004294156.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Fragaria
vesca subsp. vesca]
Length = 93
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+QDKYPHMLSV+NCFIRGSVVRYV LPP+GVDV++LHDATRREARGG
Sbjct: 44 RVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 93
>ref|XP_004135926.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform 1
[Cucumis sativus] gi|449436293|ref|XP_004135927.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
isoform 2 [Cucumis sativus]
gi|449436295|ref|XP_004135928.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like isoform 3
[Cucumis sativus] gi|449489026|ref|XP_004158193.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
isoform 1 [Cucumis sativus]
gi|449489028|ref|XP_004158194.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like isoform 2
[Cucumis sativus] gi|449489032|ref|XP_004158195.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
isoform 3 [Cucumis sativus]
Length = 93
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/50 (86%), Positives = 49/50 (98%)
Frame = +1
Query: 1 KVVEQDKYPHMLSVKNCFIRGSVVRYVLLPPDGVDVDILHDATRREARGG 150
+VV+Q+KYPHMLSV+NCFIRGSVVRYV LPPDGVDV++LHDATRREARGG
Sbjct: 44 RVVDQEKYPHMLSVRNCFIRGSVVRYVQLPPDGVDVELLHDATRREARGG 93