BLASTX nr result
ID: Ephedra26_contig00006389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00006389
(1024 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 624 e-176
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 614 e-173
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 614 e-173
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 613 e-173
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 611 e-172
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 611 e-172
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 611 e-172
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 611 e-172
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 609 e-172
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 603 e-170
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 534 e-149
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 474 e-131
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 473 e-131
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 457 e-126
ref|NP_077079.1| replicase [Clover yellow mosaic virus] 441 e-121
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 436 e-120
ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548... 422 e-115
gb|AFM77886.1| replicase [Hosta virus X] 412 e-112
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA... 412 e-112
ref|YP_002341559.1| replication-associated protein [Schlumberger... 410 e-112
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 624 bits (1608), Expect = e-176
Identities = 307/340 (90%), Positives = 316/340 (92%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS H
Sbjct: 813 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNH 872
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFS PVE+ TT
Sbjct: 873 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTT 932
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
LDDF+E L DKFDREIFTEAHGHTNCVQ DDPTTQLFSHQQAKDEALLWETIKARLTIS
Sbjct: 933 ALDDFREELHDKFDREIFTEAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETIKARLTIS 992
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
TPEANIEEFRAKKDLGDILW NYHKAM LPKEQP+FSE+LWTRCAEEVQNTYLKKS+NQ+
Sbjct: 993 TPEANIEEFRAKKDLGDILWTNYHKAMNLPKEQPDFSEELWTRCAEEVQNTYLKKSLNQL 1052
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1053 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1112
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDALSPNNIMINCEKTPQDLSRWVL+YWDFSKP+YAN
Sbjct: 1113 RRFRDALSPNNIMINCEKTPQDLSRWVLSYWDFSKPAYAN 1152
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 614 bits (1584), Expect = e-173
Identities = 303/340 (89%), Positives = 310/340 (91%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 825 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 884
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TT
Sbjct: 885 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTT 944
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S
Sbjct: 945 TLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLS 1004
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QI
Sbjct: 1005 NPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQI 1064
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1065 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1124
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN
Sbjct: 1125 RRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 1164
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 614 bits (1584), Expect = e-173
Identities = 303/340 (89%), Positives = 310/340 (91%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 825 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 884
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TT
Sbjct: 885 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTT 944
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S
Sbjct: 945 TLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLS 1004
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QI
Sbjct: 1005 NPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQI 1064
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1065 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1124
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN
Sbjct: 1125 RRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 1164
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 613 bits (1580), Expect = e-173
Identities = 303/340 (89%), Positives = 309/340 (90%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 825 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 884
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TT
Sbjct: 885 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTT 944
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIF HGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLTIS
Sbjct: 945 TLDDFKEELHDKFDREIFNPTHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTIS 1004
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS+ QI
Sbjct: 1005 NPEANLAEFRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWIRCAEEVQNTYLKKSVAQI 1064
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1065 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1124
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFR+ALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN
Sbjct: 1125 RRFREALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 1164
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 611 bits (1576), Expect = e-172
Identities = 301/340 (88%), Positives = 309/340 (90%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 825 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 884
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TT
Sbjct: 885 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTT 944
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S
Sbjct: 945 TLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLS 1004
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QI
Sbjct: 1005 NPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQI 1064
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEH ILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1065 KGGERRQSPDFHEHHILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1124
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDAL PNNIMINCE+TPQDLSRWVLNYWDFSKPSYAN
Sbjct: 1125 RRFRDALRPNNIMINCERTPQDLSRWVLNYWDFSKPSYAN 1164
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 611 bits (1575), Expect = e-172
Identities = 302/340 (88%), Positives = 309/340 (90%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 825 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 884
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TT
Sbjct: 885 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTT 944
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S
Sbjct: 945 TLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLS 1004
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QI
Sbjct: 1005 NPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQI 1064
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1065 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1124
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYAN
Sbjct: 1125 RRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYAN 1164
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 611 bits (1575), Expect = e-172
Identities = 302/340 (88%), Positives = 309/340 (90%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 825 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 884
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TT
Sbjct: 885 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTT 944
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S
Sbjct: 945 TLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLS 1004
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QI
Sbjct: 1005 NPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQI 1064
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1065 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1124
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYAN
Sbjct: 1125 RRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYAN 1164
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 611 bits (1575), Expect = e-172
Identities = 302/340 (88%), Positives = 309/340 (90%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 825 LVPSLVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 884
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+ PVED TT
Sbjct: 885 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTT 944
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIF AHGHTNCVQ DDPTTQLFSHQQAKDEALLWETI ARLT+S
Sbjct: 945 TLDDFKEELRDKFDREIFNPAHGHTNCVQTDDPTTQLFSHQQAKDEALLWETINARLTLS 1004
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLW RCAEEVQNTYLKKS++QI
Sbjct: 1005 NPEANLAEFRAKKDLGDILWENYRKAMKLPSEQPDFSEDLWIRCAEEVQNTYLKKSVSQI 1064
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1065 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 1124
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYAN
Sbjct: 1125 RRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYAN 1164
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 609 bits (1571), Expect = e-172
Identities = 298/340 (87%), Positives = 311/340 (91%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 156 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 215
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+NSNAQSSAFWEKLEATPYLKTFLSLVRED++ EFS PVED TT
Sbjct: 216 FINSNAQSSAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTT 275
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDF+E L DKFDREIF +AHGHTNCVQ D+PTTQLF+HQQAKDEALLWETI ARLTIS
Sbjct: 276 TLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALLWETINARLTIS 335
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
+PEAN+ EFRAKKDLGDILW NY KAMKLP EQP+FSEDLWTRCAEEVQNTYLKKS+ QI
Sbjct: 336 SPEANLAEFRAKKDLGDILWENYRKAMKLPNEQPDFSEDLWTRCAEEVQNTYLKKSVAQI 395
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGG+RRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 396 KGGDRRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 455
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDAL PNNIMINCEKTPQDLSRWVLN+WDFSKPSYAN
Sbjct: 456 RRFRDALRPNNIMINCEKTPQDLSRWVLNHWDFSKPSYAN 495
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 603 bits (1556), Expect = e-170
Identities = 297/340 (87%), Positives = 308/340 (90%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSLMKKAAFTDAGHKVS+YAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIH
Sbjct: 830 LVPSLMKKAAFTDAGHKVSSYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIH 889
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVN+NAQSSAFWEKLEATPYLKTFLSLVREDKI EF PVE+ T
Sbjct: 890 FVNTNAQSSAFWEKLEATPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPAT 949
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TLDDFKE L DKFDREIFT GHTNCVQ DDPTTQLFSHQQAKDEALLWE I+ARL IS
Sbjct: 950 TLDDFKEELRDKFDREIFTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMIRARLKIS 1009
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
TPEANIEEFRAKKDLGDILW NYH+AM LPKEQP+FSEDLW RCAEEVQNTYLKK++ Q+
Sbjct: 1010 TPEANIEEFRAKKDLGDILWVNYHRAMGLPKEQPDFSEDLWNRCAEEVQNTYLKKTMAQL 1069
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAK+IKPGQTIASFQQHAVMLYGTMARYM
Sbjct: 1070 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKEIKPGQTIASFQQHAVMLYGTMARYM 1129
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN
Sbjct: 1130 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 1169
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 534 bits (1376), Expect = e-149
Identities = 263/340 (77%), Positives = 290/340 (85%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAF DAGHKVSTYAGCQGITAP+VQILLD+DTTMC+ EVLYTALSRAVDSIH
Sbjct: 806 LVPSLVKKAAFADAGHKVSTYAGCQGITAPKVQILLDSDTTMCSSEVLYTALSRAVDSIH 865
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+NSNAQSSAFWEKLEATPYLKTFLSLVRE K+EEF+ PVE+ +
Sbjct: 866 FINSNAQSSAFWEKLEATPYLKTFLSLVREHKLEEFTAVEDPPQEVAPPVTHFPVENASH 925
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
TL ++SL+DK+DREI HG TNCVQ +D T QLFSHQQAKDEALLWETI ARL +S
Sbjct: 926 TLGLIQDSLADKYDREILNTNHGFTNCVQTEDLTVQLFSHQQAKDEALLWETIDARLRLS 985
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
TPEAN+ EF AKKDLGD+LW NYH+AMKLPKEQP+FS +LW RCA EVQ TYL KS+ QI
Sbjct: 986 TPEANLAEFHAKKDLGDVLWENYHRAMKLPKEQPDFSPELWERCAAEVQQTYLSKSLQQI 1045
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
KGGERRQSPDF E++ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYM
Sbjct: 1046 KGGERRQSPDFPENKILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQAAVMLYGTMARYM 1105
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR+RDAL PNNIMINCE+TP DLSRWV N+WDF+KP YAN
Sbjct: 1106 RRYRDALGPNNIMINCERTPADLSRWVRNHWDFTKPXYAN 1145
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 474 bits (1221), Expect = e-131
Identities = 235/340 (69%), Positives = 266/340 (78%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KK+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV SIH
Sbjct: 832 LVPSLLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIH 891
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+N+ S+FWEKLEATPYLK FLS VRE+ I PVE+ +
Sbjct: 892 FINTGPTHSSFWEKLEATPYLKAFLSTVREEAIAAHQLPSADPRPDPEPKTHFPVENTSC 951
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
L + E + +KF+REIFTE GHTNCVQ +P QLF HQQAKDEALLWETIKARLTIS
Sbjct: 952 ALGAYMEKVPEKFEREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTIS 1011
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
+PEAN EEF KKD+GDILW +Y KAM LP+E FSEDLW A EVQNTYL K +N +
Sbjct: 1012 SPEANWEEFYKKKDIGDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNML 1071
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GERRQSPDF +HQIL+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMARYM
Sbjct: 1072 KNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYM 1131
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFR+AL PN+I INCE TP+DLSR++ NYWDF SYAN
Sbjct: 1132 RRFREALGPNHIKINCEATPKDLSRFIQNYWDFKPASYAN 1171
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 473 bits (1217), Expect = e-131
Identities = 234/340 (68%), Positives = 265/340 (77%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KK+A+ + GHKVSTYAGCQGITAP++QILLDNDT MC+KEVLYTALSRAV SIH
Sbjct: 832 LVPSLLKKSAYGEMGHKVSTYAGCQGITAPKIQILLDNDTVMCSKEVLYTALSRAVHSIH 891
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+N+ S+FWEKLEATPYLK FLS VRE+ I PVE+ +
Sbjct: 892 FINTGPTHSSFWEKLEATPYLKAFLSTVREEAIAAHQLPNADPRPDPEPKTHFPVENTSC 951
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
L + E + +KF+REIFTE GHTNCVQ +P QLF HQQAKDEALLWETIKARLTIS
Sbjct: 952 ALGAYMEKVPEKFEREIFTEDRGHTNCVQTQNPLVQLFPHQQAKDEALLWETIKARLTIS 1011
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
+PEAN EEF KKD+GDILW +Y KAM LP+E FSEDLW A EVQNTYL K +N +
Sbjct: 1012 SPEANWEEFYRKKDIGDILWLHYKKAMTLPEEPLPFSEDLWRLSAAEVQNTYLSKPMNML 1071
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GERRQSPDF +HQIL+FLKSQWVKKMEKLG KIK GQTIASFQQHAVMLYGTMARYM
Sbjct: 1072 KNGERRQSPDFEKHQILLFLKSQWVKKMEKLGGPKIKAGQTIASFQQHAVMLYGTMARYM 1131
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RRFR+ L PN+I INCE TP+DLSR++ NYWDF SYAN
Sbjct: 1132 RRFREVLGPNHIKINCEATPKDLSRFIQNYWDFKPASYAN 1171
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 457 bits (1176), Expect = e-126
Identities = 231/340 (67%), Positives = 263/340 (77%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKAAF++AGHK STYAGCQGITA ++QILLD++T MC++EVLYTALSRAVDSIH
Sbjct: 900 LVPSLIKKAAFSEAGHKTSTYAGCQGITARKLQILLDSNTPMCSQEVLYTALSRAVDSIH 959
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+N+ SS FWEKLEATPYLKTFLS+VREDKI E+ PVE+ T
Sbjct: 960 FINTAPTSSNFWEKLEATPYLKTFLSMVREDKILEWRPKEPEPAKEEPPKTHFPVENGNT 1019
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
L++F E L+ K +REIF E+HGHTNCVQ D+ Q SHQQAKDEALLWETIKARL IS
Sbjct: 1020 ILEEFTEELAQKHEREIFNESHGHTNCVQTDNKIIQTLSHQQAKDEALLWETIKARLVIS 1079
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
+ N EF KKD+GDILW NY +AM LP++ F E+LW A E+Q+TYL KS +
Sbjct: 1080 HKQHNWTEFVKKKDIGDILWLNYKRAMHLPEDPIPF-EELWELAAREIQHTYLSKSTQML 1138
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GERRQSPDF E ILIFLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYM
Sbjct: 1139 KNGERRQSPDFGEKDILIFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYM 1198
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR RD P +IMINCE+TP DLS W LNYW+F KPSYAN
Sbjct: 1199 RRIRDIYMPEHIMINCERTPTDLSYWALNYWNFDKPSYAN 1238
>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
Length = 1670
Score = 441 bits (1135), Expect = e-121
Identities = 210/340 (61%), Positives = 262/340 (77%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KK ++T+ G+K STYAGCQGITA RVQ+LLD DTT+C+ +VLYTALSRAV ++H
Sbjct: 1121 LVPSLIKKRSYTEMGYKTSTYAGCQGITADRVQVLLDTDTTLCSDQVLYTALSRAVHAVH 1180
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+N++A SSAFW+KL +TPYLKTFLS +RED++ E PVE++
Sbjct: 1181 FINTSATSSAFWDKLNSTPYLKTFLSTLREDRLREEGPKPETPEEPKPATTHFPVENENL 1240
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
+L+D E L +K +RE+++ HG++NCVQ DDP QLFSHQQAKD+ LLW TI+ARL IS
Sbjct: 1241 SLEDKVEELLEKHERELYSSDHGYSNCVQTDDPVVQLFSHQQAKDQTLLWATIEARLKIS 1300
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
P+AN+EEFR KK++GD+LW NY +AMKLP + EFS +LW CAEEVQ TYL K +N I
Sbjct: 1301 NPKANMEEFRMKKNVGDVLWLNYKRAMKLPDKPIEFSHELWHACAEEVQKTYLSKPLNMI 1360
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GE RQSPDF +H I +FLKSQWVKK+EKLGA KIKPGQTIASFQQ VMLYGTMARYM
Sbjct: 1361 KNGENRQSPDFDKHTISLFLKSQWVKKLEKLGAPKIKPGQTIASFQQATVMLYGTMARYM 1420
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR R A P NI +NCE+TPQ L+ ++ + W F +P+YAN
Sbjct: 1421 RRIRQAFQPPNIQLNCEQTPQQLTTFIKDQWSFDQPAYAN 1460
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 436 bits (1122), Expect = e-120
Identities = 214/340 (62%), Positives = 253/340 (74%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPS++KK + + G+K STYAGCQGITAPR+QILLD DTT+C EVLYTALSRAV IH
Sbjct: 1153 LVPSIIKKRTYMELGYKTSTYAGCQGITAPRLQILLDCDTTLCADEVLYTALSRAVHGIH 1212
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+N+ A S AFW+KL ATPYLKTFL RE++++E PVE++
Sbjct: 1213 FINTGATSGAFWDKLNATPYLKTFLDFTREERLKESQPREQEPTEPEGPTTHFPVENEKF 1272
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
L++ E L +K DREI HGHTNCVQ +D QLFSHQQAKD+ALLW TI+ARL IS
Sbjct: 1273 VLEEQVEELLEKHDREILRPDHGHTNCVQTEDAVIQLFSHQQAKDQALLWATIEARLKIS 1332
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
P+ANI EF AKK++GD+L+ +YH+AMKLP + F EDLW CA+EVQ TYL K IN +
Sbjct: 1333 NPKANIAEFNAKKEIGDVLFEHYHQAMKLPDKPIPFMEDLWVACAQEVQGTYLSKPINML 1392
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GE RQSPDF ++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYM
Sbjct: 1393 KNGEYRQSPDFDKNTIALFLKSQWVKKMEKLGAPKIKPGQTIASFQQSAVMLYGTMARYM 1452
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR R+A P IMINCEK PQ LS W+ NYW F+ +YAN
Sbjct: 1453 RRMREAFQPPEIMINCEKDPQTLSHWIQNYWKFNSYAYAN 1492
>ref|YP_004849314.1| replicase [Tamus red mosaic virus] gi|345548097|gb|AEO12140.1|
replicase [Tamus red mosaic virus]
Length = 1501
Score = 422 bits (1085), Expect = e-115
Identities = 203/340 (59%), Positives = 252/340 (74%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL++K +T+ G+K STYAGCQGITAP+VQ+LL++DTT+CT +VLYTALSRAV SIH
Sbjct: 952 LVPSLIQKKTYTELGYKTSTYAGCQGITAPKVQVLLNSDTTLCTDKVLYTALSRAVHSIH 1011
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
F+N++A S+AFW+KL ATPYLKTFLS VRE + PVE+
Sbjct: 1012 FINTSASSAAFWDKLNATPYLKTFLSTVREQSLASAKPREEGPTPVAAPKTHVPVENSNL 1071
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
L+ E L +K DREIF HGH+NCVQ D+PT QL SHQQAKD+ LLW TI+ARL IS
Sbjct: 1072 CLEGAVEKLLEKHDREIFRADHGHSNCVQTDNPTIQLSSHQQAKDQTLLWATIEARLKIS 1131
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
TPE N+ E+ K+++GD+LW +Y AM LP+E F + LW CAEEVQ TYL K ++ +
Sbjct: 1132 TPERNLAEYLMKREVGDVLWLHYKNAMNLPEEPIPFEQTLWDTCAEEVQKTYLSKPMHML 1191
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GE RQSPDFH++ I +FLKSQWVKKMEKLGA KIKPGQTIASFQQ AVMLYGTMARYM
Sbjct: 1192 KNGELRQSPDFHKNTIALFLKSQWVKKMEKLGADKIKPGQTIASFQQAAVMLYGTMARYM 1251
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR R+ P ++ INCE++P+ +S W+ N W+F +YAN
Sbjct: 1252 RRMREVFQPTHVFINCEQSPEGMSDWIKNEWNFKGNAYAN 1291
>gb|AFM77886.1| replicase [Hosta virus X]
Length = 1473
Score = 412 bits (1058), Expect = e-112
Identities = 203/340 (59%), Positives = 243/340 (71%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKA + GHK STYAGCQG+T +VQI LD++TT+C+ EVLYTALSRAV+ I+
Sbjct: 905 LVPSLLKKATLEELGHKCSTYAGCQGVTLSKVQIYLDSNTTLCSNEVLYTALSRAVEQIN 964
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNS + FW KLEATPYLKTFL L RE+KI E + PVE
Sbjct: 965 FVNSGPFNGPFWAKLEATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAH 1024
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
E + +K REI+ + HGHTNCVQ D+P Q+F+HQQAKDEAL WETI+ARL I+
Sbjct: 1025 LYSSITEEMPEKHAREIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRIT 1084
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
T EAN++E K+D+GD+L+ YHKAM LPK+ F DLW CA+EVQ TYL K IN I
Sbjct: 1085 TSEANVQELNEKRDIGDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLI 1144
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GE+RQ PDF ++ I++FLKSQWVKKMEKLGA IKPGQTIASF Q VMLYGTMARYM
Sbjct: 1145 KNGEKRQGPDFDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYM 1204
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR RD P +I+INCEKTP +S +V WDFS +YAN
Sbjct: 1205 RRIRDRFCPKHILINCEKTPTQISDFVKAQWDFSDFAYAN 1244
>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
[Hosta virus X]
Length = 1507
Score = 412 bits (1058), Expect = e-112
Identities = 203/340 (59%), Positives = 243/340 (71%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPSL+KKA + GHK STYAGCQG+T +VQI LD++TT+C+ EVLYTALSRAV+ I+
Sbjct: 939 LVPSLLKKATLEELGHKCSTYAGCQGVTLSKVQIYLDSNTTLCSNEVLYTALSRAVEQIN 998
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVNS + FW KLEATPYLKTFL L RE+KI E + PVE
Sbjct: 999 FVNSGPFNGPFWAKLEATPYLKTFLRLTREEKINEITPEEPKPKEPEPPKTHFPVETSAH 1058
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
E + +K REI+ + HGHTNCVQ D+P Q+F+HQQAKDEAL WETI+ARL I+
Sbjct: 1059 LYSSITEEMPEKHAREIYNKTHGHTNCVQTDEPLVQMFAHQQAKDEALFWETIEARLRIT 1118
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
T EAN++E K+D+GD+L+ YHKAM LPK+ F DLW CA+EVQ TYL K IN I
Sbjct: 1119 TSEANVQELNEKRDIGDLLFHAYHKAMGLPKDPIPFENDLWETCAQEVQQTYLSKPINLI 1178
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GE+RQ PDF ++ I++FLKSQWVKKMEKLGA IKPGQTIASF Q VMLYGTMARYM
Sbjct: 1179 KNGEKRQGPDFDKNAIMLFLKSQWVKKMEKLGAPTIKPGQTIASFHQITVMLYGTMARYM 1238
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR RD P +I+INCEKTP +S +V WDFS +YAN
Sbjct: 1239 RRIRDRFCPKHILINCEKTPTQISDFVKAQWDFSDFAYAN 1278
>ref|YP_002341559.1| replication-associated protein [Schlumbergera virus X]
gi|217316801|gb|AAR11537.2| replication-associated
protein [Schlumbergera virus X]
Length = 1545
Score = 410 bits (1053), Expect = e-112
Identities = 199/340 (58%), Positives = 245/340 (72%)
Frame = -3
Query: 1022 LVPSLMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIH 843
LVPS+ KK A+ + GHKVSTYAGCQGITAP +QIL+DNDT MC+++V+YTALSRAV +IH
Sbjct: 995 LVPSMYKKQAYGEMGHKVSTYAGCQGITAPEIQILIDNDTPMCSQQVMYTALSRAVHAIH 1054
Query: 842 FVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXPVEDKTT 663
FVN+ + AFWEKL ATPYL FL LVRE+K + S PVE+
Sbjct: 1055 FVNTGVTNDAFWEKLAATPYLAAFLRLVREEKTRQPSPTEDPPAQPPAPETHFPVENPKN 1114
Query: 662 TLDDFKESLSDKFDREIFTEAHGHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTIS 483
D E++ DK RE+F+E GH+NCVQ +DP Q+F HQQA+DE L W TI+ARL +S
Sbjct: 1115 FFDKIIENMPDKHSRELFSEKDGHSNCVQTEDPIVQMFPHQQARDETLFWATIEARLKVS 1174
Query: 482 TPEANIEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQI 303
+PE N EEF +K+ +GD+L+ NY AM LPKE +F E LW CA+EVQ TYL K ++ +
Sbjct: 1175 SPEKNFEEFVSKRHIGDVLFENYKLAMGLPKEPIQFDEGLWNVCADEVQRTYLSKPLHML 1234
Query: 302 KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYM 123
K GE RQSPDF I +FLKSQWVKK+EKLG +IK GQTIASFQQ AVMLYGTMARYM
Sbjct: 1235 KNGEGRQSPDFDPKTIALFLKSQWVKKVEKLGQPRIKAGQTIASFQQEAVMLYGTMARYM 1294
Query: 122 RRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYAN 3
RR R+ P +IMINCE TP+ LS+W L W+F++ SYAN
Sbjct: 1295 RRVREVFQPKDIMINCETTPEALSQWALENWNFNRTSYAN 1334