BLASTX nr result

ID: Ephedra26_contig00006379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006379
         (2308 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001032257.1| hypothetical protein TTHERM_00648560 [Tetrah...    60   5e-06

>ref|XP_001032257.1| hypothetical protein TTHERM_00648560 [Tetrahymena thermophila]
            gi|89286597|gb|EAR84594.1| hypothetical protein
            TTHERM_00648560 [Tetrahymena thermophila SB210]
          Length = 808

 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 14/251 (5%)
 Frame = +1

Query: 1582 VTHGSNGKKTSRVKSSTREGVPREAVLNTIQSNRMSTPRYNHPVETFAHQQQQCKETYVH 1761
            + + +N     R++S   + +   + ++T  SN  ST R N   E    Q    + +   
Sbjct: 248  IINSNNNSNIIRIRSKNPKDLSDLSNIHTQISNNKSTLRSNKKEE----QNSSLQNSLAD 303

Query: 1762 SFQHSNNVSANNKQHSKERSIQDSQHSEKLSTNSHRLYSGMSAHDPQYSAKNSTVHTENQ 1941
            S  +   +   N  +  + S Q+ Q + K+++ + R  +G+S     YS KNS     +Q
Sbjct: 304  SQLYQQQIRKRNSLY--QNSTQNQQINNKINSQNQRNGNGLSNQHNFYSIKNSVSQNTSQ 361

Query: 1942 QQNTTQSVVLDKEYILKMQTSMMEKFNKLVGLLSNDLSNKKSQDTTE--RFKSEATEIIK 2115
            +++ + S  L+++Y   M+ +     N+LV +  N+  N+  QDT    + K E  ++I+
Sbjct: 362  KRDNSNS--LNQKYPTLMRRN---DNNQLVKVFQNETKNRDKQDTLRLIQIKKEQEDLIR 416

Query: 2116 SFSHDLFGHVEKAQNFGSWMTNTMFEQLEERIKRSLIEHM-----------DKKFQELR- 2259
              +      + K Q       +++F+  +E++  S IE M           +K F +L+ 
Sbjct: 417  QQNEQRKLEIIKKQK----EIDSLFQTTKEQLYGSQIEKMSSVGQHIYQQREKYFNQLKN 472

Query: 2260 ELIIQLPTKDN 2292
               +QLP KDN
Sbjct: 473  NQQLQLPQKDN 483


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