BLASTX nr result

ID: Ephedra26_contig00006348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006348
         (620 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16531.1| unknown [Picea sitchensis]                              71   3e-10
gb|ABK21767.1| unknown [Picea sitchensis]                              58   2e-06

>gb|ABR16531.1| unknown [Picea sitchensis]
          Length = 183

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
 Frame = +3

Query: 264 YVLCDSEGLYVDEKISCVLREGDEVKGGHLYFVLPKKKLEFVLSESGMXXXXXXXXXXXX 443
           + +C+S+GLYV + IS +L + D ++ G LYF+LP++KL+FVL++S M            
Sbjct: 47  HFICNSDGLYVGQNISQILGDDDRLQIGQLYFLLPQRKLQFVLTDSDMASLLSKISTTLS 106

Query: 444 XXXK----------------NMQPIFFVHHKDAEEEEEKGQQGLYCCSISQMQTVNAKRR 575
              K                 +QP+F +H +  E  EE       C S  QM  ++  R 
Sbjct: 107 AQKKKRQSRRLSCGFGKAQVQVQPLFDIHSQHDECGEEYHYSSACCMSRRQMIPISTPRS 166

Query: 576 VSKAPWQCHLDTILE 620
             +  WQ  L+TI E
Sbjct: 167 RGRTQWQSKLETIAE 181


>gb|ABK21767.1| unknown [Picea sitchensis]
          Length = 180

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/104 (34%), Positives = 56/104 (53%)
 Frame = +3

Query: 96  MGICSSSVQWDVVERAKKNDRGDKMVVVITHEGSAIEEKHGAKCCDVLTHCCSSSKYVLC 275
           MG C SS     V  A           +I  +GS +E     +  ++L        + +C
Sbjct: 1   MGSCVSSTATSSVPAATAK--------LILMDGSILEFSEVVRSQEILQEYPG---HFIC 49

Query: 276 DSEGLYVDEKISCVLREGDEVKGGHLYFVLPKKKLEFVLSESGM 407
           +S+GLY    IS VLR+ D+++ G LYF+LP++KL+FVL++S M
Sbjct: 50  NSDGLYAGRNISQVLRDDDQLQIGQLYFLLPQRKLQFVLTDSDM 93


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