BLASTX nr result

ID: Ephedra26_contig00006341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006341
         (1077 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77147.1| unknown [Picea sitchensis]                             110   7e-22
ref|XP_001758517.1| predicted protein [Physcomitrella patens] gi...    59   4e-06

>gb|ADE77147.1| unknown [Picea sitchensis]
          Length = 219

 Score =  110 bits (276), Expect = 7e-22
 Identities = 77/210 (36%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
 Frame = +2

Query: 266 AKTIAKGASKGVLVKADKATFKVLSKCLKASEGALNLVRYSTDLHM----CGWESLVTSY 433
           AK +AK AS+G ++K    +F+ +SK LKASEGA+NLVRYS  L M     GW+ ++  Y
Sbjct: 4   AKVVAKSASRGFIIKDSSGSFRKISKGLKASEGAINLVRYSKTLGMDANDIGWDFVIKGY 63

Query: 434 KLFKSAFKVLEGTDMLAKLPLEESGLISGAERVIKVGLDSVGVVVKAFTLSKHINGVVIN 613
           KL KSAF V EG ++        S    G   VIK GL+ +GVV+KA  LSK +  ++++
Sbjct: 64  KLSKSAFNVFEGVNVFHGKIAAVSARGFG---VIKGGLEGLGVVIKALALSKQMYAILVH 120

Query: 614 RMKVSSQAFLELLED---VXXXXXXXXXXXXFLCLPTTKVRRPPRLHSTLKLHNSHALES 784
              VS  AF  L E+                 LCLP+ K      L    +       ++
Sbjct: 121 SFGVSRGAFRALFEEYRNARGYGCHGNEKRNTLCLPSRKRHGVSCLQCHFEFDGFACKKT 180

Query: 785 QPIFSLLASTFQFQPPLP--CEDLFSLSIP 868
            P+   LAS+F     +   C++LF LSIP
Sbjct: 181 LPLTDFLASSFVAHQSVGSICDNLFYLSIP 210


>ref|XP_001758517.1| predicted protein [Physcomitrella patens]
           gi|162690127|gb|EDQ76495.1| predicted protein
           [Physcomitrella patens]
          Length = 532

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
 Frame = +2

Query: 131 LGGMTLRAVSKGIKFAYGVAKGVKAVSSVNSVRNPLQGVLLVIFGAKTIAKGASKGVLVK 310
           LG  T++ V KG+K    ++KG+  V+ +   R             KT A G    + +K
Sbjct: 245 LGMNTVKIVLKGVK----ISKGLTTVTKLCKNR-------------KTGAIGVGAEMAIK 287

Query: 311 ADK----ATFKVLSKCLKASEGALNLVRYSTDL----------HMCGWESLVTSYKLFKS 448
           A++      FKV+ K LKASEGA N+V  S ++           +  W  ++  +K  KS
Sbjct: 288 ANQNMLGQRFKVIVKGLKASEGAANVVSISKEVGKTLGMLDQAELLSWNLVMKGFKFTKS 347

Query: 449 AFKVLEGTDMLAKLPLEESGLISGAERVI---KVGLDSVGVVVKAFTLSKHINGVVI 610
           A +VLE    L        G++S A + I   K  ++ VGVVVKA  LS+ +  V++
Sbjct: 348 AIRVLEPVGSL------RWGVMSVARKGILEAKGAVEGVGVVVKAVVLSQELYMVIL 398


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