BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006207
         (2812 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A...  1181   0.0  
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...  1170   0.0  
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...  1165   0.0  
gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japo...  1164   0.0  
gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptid...  1164   0.0  
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su...  1164   0.0  
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su...  1163   0.0  
ref|XP_006285577.1| hypothetical protein CARUB_v10007021mg [Caps...  1163   0.0  
gb|EOY28253.1| DNA-directed RNA polymerase family protein isofor...  1162   0.0  
ref|XP_006413743.1| hypothetical protein EUTSA_v10024251mg [Eutr...  1161   0.0  
ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II su...  1160   0.0  
ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II su...  1160   0.0  
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...  1159   0.0  
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not...  1159   0.0  
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su...  1159   0.0  
ref|XP_002867829.1| hypothetical protein ARALYDRAFT_492703 [Arab...  1159   0.0  
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su...  1157   0.0  
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr...  1157   0.0  
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...  1157   0.0  
ref|NP_193902.1| DNA-directed RNA polymerase II subunit RPB2 [Ar...  1155   0.0  

>ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
            gi|548863150|gb|ERN20505.1| hypothetical protein
            AMTR_s00068p00181410 [Amborella trichopoda]
          Length = 1190

 Score = 1181 bits (3055), Expect = 0.0
 Identities = 582/652 (89%), Positives = 622/652 (95%), Gaps = 1/652 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ +
Sbjct: 16   ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAD 75

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 76   FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 135

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EELAE+QEL K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 136  HEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 195

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QN+PPSSMFVRMLSR S KGGSSGQ+
Sbjct: 196  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRMLSRTSSKGGSSGQY 255

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 256  IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRG+TVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 316  VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLVC 375

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 376  ALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDNGKEVNLQFAI 435

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA
Sbjct: 436  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 495

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 496  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 555

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCWVGIHRNP+ LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 556  SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 615

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R S DEGWHDLVA+GFIEYVDTEE
Sbjct: 616  YGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDTEE 667



 Score =  384 bits (986), Expect = e-103
 Identities = 196/242 (80%), Positives = 203/242 (83%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 702  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 761

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 762  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 821

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP+TQEE  
Sbjct: 822  KMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITQEEMQ 881

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 882  GQASRYTRRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 941

Query: 8    KG 3
            KG
Sbjct: 942  KG 943


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
            vinifera] gi|147841183|emb|CAN72948.1| hypothetical
            protein VITISV_033708 [Vitis vinifera]
            gi|302143287|emb|CBI21848.3| unnamed protein product
            [Vitis vinifera]
          Length = 1193

 Score = 1170 bits (3028), Expect = 0.0
 Identities = 579/653 (88%), Positives = 620/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 22   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG +
Sbjct: 82   FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 141

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EE+ E QE  K+F+GKVPIMLRS+YCT+    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 142  LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+
Sbjct: 202  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 262  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 322  VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI
Sbjct: 382  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 441

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 502  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 561

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP +TK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 562  SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 621

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI+K DI  LQ R S  D GWHDLV++GFIEYVDTEE
Sbjct: 622  YGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEE 674



 Score =  383 bits (984), Expect = e-103
 Identities = 195/242 (80%), Positives = 204/242 (84%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 709  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 768

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 769  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 828

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++Q++S 
Sbjct: 829  KMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDSQ 888

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 889  GQASRYTRRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 948

Query: 8    KG 3
            KG
Sbjct: 949  KG 950


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score = 1165 bits (3015), Expect = 0.0
 Identities = 577/653 (88%), Positives = 618/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R SS+E GWHDLVA+GFIEY+DTEE
Sbjct: 623  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEE 675



 Score =  373 bits (958), Expect = e-100
 Identities = 190/242 (78%), Positives = 199/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 710  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 769

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 770  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 829

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP+ QEE+ 
Sbjct: 830  KMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQ 889

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+G+VDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 890  GQSARYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 949

Query: 8    KG 3
            KG
Sbjct: 950  KG 951


>gb|EEE59590.1| hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
          Length = 1218

 Score = 1164 bits (3011), Expect = 0.0
 Identities = 575/652 (88%), Positives = 614/652 (94%), Gaps = 1/652 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 50   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 109

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 110  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 169

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 170  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 229

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 230  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 289

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 290  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 349

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 350  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 409

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 410  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 469

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 470  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 529

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 530  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 589

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 590  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 649

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + +EGWHDLVA+GFIEY+DTEE
Sbjct: 650  YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEE 701



 Score =  376 bits (966), Expect = e-101
 Identities = 191/242 (78%), Positives = 203/242 (83%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 736  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 795

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 796  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 855

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKT+P+ Q+++ 
Sbjct: 856  KMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQ 915

Query: 182  GG--RYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYT+RD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 916  GQATRYTKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 975

Query: 8    KG 3
            KG
Sbjct: 976  KG 977


>gb|ABF97884.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative,
            expressed [Oryza sativa Japonica Group]
            gi|125545063|gb|EAY91202.1| hypothetical protein
            OsI_12811 [Oryza sativa Indica Group]
          Length = 1222

 Score = 1164 bits (3011), Expect = 0.0
 Identities = 575/652 (88%), Positives = 614/652 (94%), Gaps = 1/652 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 54   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 113

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 114  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 173

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 174  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 233

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 234  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 293

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 294  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 353

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 354  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 413

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 414  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 473

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 474  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 533

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 534  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 593

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 594  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 653

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + +EGWHDLVA+GFIEY+DTEE
Sbjct: 654  YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEE 705



 Score =  376 bits (966), Expect = e-101
 Identities = 191/242 (78%), Positives = 203/242 (83%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 740  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 799

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 800  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 859

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKT+P+ Q+++ 
Sbjct: 860  KMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQ 919

Query: 182  GG--RYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYT+RD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 920  GQATRYTKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 979

Query: 8    KG 3
            KG
Sbjct: 980  KG 981


>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
            [Brachypodium distachyon]
          Length = 1228

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 575/652 (88%), Positives = 612/652 (93%), Gaps = 1/652 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 60   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 119

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 120  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHD 179

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYF+INGSEKVL
Sbjct: 180  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVL 239

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 240  IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 299

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 300  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 359

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 360  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 419

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 420  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 479

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 480  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 539

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 540  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 599

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 600  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 659

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V  QRLLI+K  I  LQ+R + DEGWHDLVA+GFIEY+DTEE
Sbjct: 660  YGRCSRPLFIVDGQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEE 711



 Score =  375 bits (962), Expect = e-101
 Identities = 190/242 (78%), Positives = 203/242 (83%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 746  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 805

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 806  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 865

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKT+P+ Q+++ 
Sbjct: 866  KMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQ 925

Query: 182  GG--RYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RY++RD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 926  GQATRYSKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 985

Query: 8    KG 3
            KG
Sbjct: 986  KG 987


>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
            brachyantha]
          Length = 1184

 Score = 1163 bits (3009), Expect = 0.0
 Identities = 574/652 (88%), Positives = 614/652 (94%), Gaps = 1/652 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 16   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 75

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 76   FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 135

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 136  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 195

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 196  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 255

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 256  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 316  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 375

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 376  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 435

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 436  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 495

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 496  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 555

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 556  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 615

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + +EGWHDLVA+GFIEY+DTEE
Sbjct: 616  YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEE 667



 Score =  376 bits (966), Expect = e-101
 Identities = 191/242 (78%), Positives = 203/242 (83%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 702  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 761

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 762  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 821

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKT+P+ Q+++ 
Sbjct: 822  KMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQ 881

Query: 182  GG--RYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYT+RD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 882  GQATRYTKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 941

Query: 8    KG 3
            KG
Sbjct: 942  KG 943


>ref|XP_006285577.1| hypothetical protein CARUB_v10007021mg [Capsella rubella]
            gi|482554282|gb|EOA18475.1| hypothetical protein
            CARUB_v10007021mg [Capsella rubella]
          Length = 1188

 Score = 1163 bits (3008), Expect = 0.0
 Identities = 573/653 (87%), Positives = 618/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 21   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 81   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 141  GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 200

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYVGEVRSMAENQNRPPS+MFVRML+R S KGGSSGQ+
Sbjct: 201  IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSSGQY 260

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IR TLPYIR++IPIIIVFRALGFVADKDILEHICYDF+D  MMELLRPSLEEAFVIQ+QQ
Sbjct: 261  IRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 320

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGE CETKKAYYFGYI+HRLLLC
Sbjct: 321  VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGEHCETKKAYYFGYIVHRLLLC 380

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 381  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 440

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 501  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SP+VIPTATK+FVNG WVG+HR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 561  SPSVIPTATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V NQRLLI+K DI  LQ+R S++E GWH LVA+GFIEY+DTEE
Sbjct: 621  YGRCSRPLFIVDNQRLLIKKRDIYALQQRESAEEDGWHHLVAKGFIEYIDTEE 673



 Score =  369 bits (947), Expect = 4e-99
 Identities = 187/242 (77%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 708  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 767

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 768  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 827

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R +T GMRHGSYDKLD+DGLAPPGTRV+GEDVIIGKTTP++Q+E+ 
Sbjct: 828  KMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDGLAPPGTRVTGEDVIIGKTTPISQDEAE 887

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+GMVDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 888  GQSSRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 947

Query: 8    KG 3
            KG
Sbjct: 948  KG 949


>gb|EOY28253.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
            cacao]
          Length = 1189

 Score = 1162 bits (3007), Expect = 0.0
 Identities = 574/653 (87%), Positives = 616/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 80   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 260  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVG+ CETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 380  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCWVG+HRNPD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 560  SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R S  D GWHDLVA+GFIEY+DTEE
Sbjct: 620  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEE 672



 Score =  372 bits (955), Expect = e-100
 Identities = 189/242 (78%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 707  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 766

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 767  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 826

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++QEE+ 
Sbjct: 827  KMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQ 886

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RY+RRD S S+RHSE+G+VDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 887  GQASRYSRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 946

Query: 8    KG 3
            KG
Sbjct: 947  KG 948


>ref|XP_006413743.1| hypothetical protein EUTSA_v10024251mg [Eutrema salsugineum]
            gi|557114913|gb|ESQ55196.1| hypothetical protein
            EUTSA_v10024251mg [Eutrema salsugineum]
          Length = 1188

 Score = 1161 bits (3004), Expect = 0.0
 Identities = 572/653 (87%), Positives = 617/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 21   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 81   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 141  GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 200

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYVGEVRSMAENQNRPPS+MFVRML+R S KGGSSGQ+
Sbjct: 201  IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSSGQY 260

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IR TLPYIR++IPIIIVFRALGFVADKDILEHICYDF+D  MMELLRPSLEEAFVIQ+QQ
Sbjct: 261  IRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 320

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVG+GE CETKKAYYFGYIIHRLLLC
Sbjct: 321  VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 380

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 381  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 440

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 501  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SP+VIP ATK+FVNG WVG+HR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 561  SPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V NQRLLI+K DI  LQ+R S++E GWH LVA+GFIEY+DTEE
Sbjct: 621  YGRCSRPLFIVDNQRLLIKKRDIYALQQRESAEEDGWHHLVAKGFIEYIDTEE 673



 Score =  368 bits (945), Expect = 7e-99
 Identities = 186/242 (76%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 708  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 767

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 768  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 827

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R +T GMRHGSY+KLD+DGLAPPGTRV+GEDVIIGKTTP++Q+E+ 
Sbjct: 828  KMGTLVKEDFGRPDRASTMGMRHGSYEKLDDDGLAPPGTRVTGEDVIIGKTTPISQDEAQ 887

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+GMVDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 888  GQSSRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 947

Query: 8    KG 3
            KG
Sbjct: 948  KG 949


>ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
            X2 [Setaria italica]
          Length = 1190

 Score = 1160 bits (3000), Expect = 0.0
 Identities = 571/652 (87%), Positives = 614/652 (94%), Gaps = 1/652 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 22   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 81

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 82   FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 141

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EE+ E  +  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 142  CEEVTETSDYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 201

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNKF+YV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 202  IAQEKMSTNHVYVFKKRQPNKFSYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 261

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 262  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 322  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 381

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 382  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 441

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 502  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 561

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 562  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 621

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + DEGWH+LV++G+IEY+DTEE
Sbjct: 622  YGRCSRPLFIVENQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDTEE 673



 Score =  374 bits (961), Expect = e-100
 Identities = 189/242 (78%), Positives = 203/242 (83%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 708  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 767

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 768  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 827

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKT+P+ Q+++ 
Sbjct: 828  KMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQ 887

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RY++RD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 888  GQASRYSKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 947

Query: 8    KG 3
            KG
Sbjct: 948  KG 949


>ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
            X1 [Setaria italica]
          Length = 1226

 Score = 1160 bits (3000), Expect = 0.0
 Identities = 571/652 (87%), Positives = 614/652 (94%), Gaps = 1/652 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 58   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 117

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 118  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 177

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
             EE+ E  +  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 178  CEEVTETSDYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 237

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNKF+YV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 238  IAQEKMSTNHVYVFKKRQPNKFSYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 297

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 298  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 357

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 358  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 417

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 418  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 477

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 478  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 537

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 538  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 597

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 598  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 657

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + DEGWH+LV++G+IEY+DTEE
Sbjct: 658  YGRCSRPLFIVENQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDTEE 709



 Score =  374 bits (961), Expect = e-100
 Identities = 189/242 (78%), Positives = 203/242 (83%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV
Sbjct: 744  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 803

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 804  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 863

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKT+P+ Q+++ 
Sbjct: 864  KMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQ 923

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RY++RD STS+RHSESGMVDQVLLTTN DGLRFVK+RMRSVRIPQIGDKFSSRHGQ
Sbjct: 924  GQASRYSKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQ 983

Query: 8    KG 3
            KG
Sbjct: 984  KG 985


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score = 1159 bits (2999), Expect = 0.0
 Identities = 573/653 (87%), Positives = 615/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 80   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDF+D  MMELLRPSLEEAFVIQ+QQ
Sbjct: 260  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y+QKCVD+GKDVNLQ+AI
Sbjct: 380  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 560  SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQER-TSSDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI++ DI  LQ+R T  D GWHDLVA+GFIEY+DTEE
Sbjct: 620  YGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEE 672



 Score =  374 bits (961), Expect = e-100
 Identities = 189/242 (78%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDT+AYVLYYPQKPLV
Sbjct: 707  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLV 766

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 767  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 826

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDV+IGKTTP+ Q+E+ 
Sbjct: 827  KMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEAQ 886

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD STS+RHSE+GMVDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 887  GPAARYTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 946

Query: 8    KG 3
            KG
Sbjct: 947  KG 948


>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 1193

 Score = 1159 bits (2998), Expect = 0.0
 Identities = 572/653 (87%), Positives = 615/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 21   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 81   FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 141  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 201  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 260

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 261  IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVG GE CETKKAYYFGYIIHRLLLC
Sbjct: 321  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLC 380

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y+QKCVD+GKDVNLQ+AI
Sbjct: 381  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 440

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 501  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 561  SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R + +E GWHDLV+ GFIEY+DTEE
Sbjct: 621  YGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDTEE 673



 Score =  372 bits (954), Expect = e-100
 Identities = 188/243 (77%), Positives = 199/243 (81%), Gaps = 23/243 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 708  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 767

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 768  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSAIDRGFFRSLFFRSYRDEEK 827

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP+ Q+E+ 
Sbjct: 828  KMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQ 887

Query: 182  G---GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHG 12
            G    RYTRRD S S+RHSE+G+VDQVLLTTN DGLRFVK+R+RS+RIPQIGDKFSSRHG
Sbjct: 888  GQAASRYTRRDHSISLRHSENGIVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHG 947

Query: 11   QKG 3
            QKG
Sbjct: 948  QKG 950


>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
            arietinum]
          Length = 1194

 Score = 1159 bits (2998), Expect = 0.0
 Identities = 573/653 (87%), Positives = 615/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE+STLFPKAARLRNLTYSAPLYVDV+KRV KKG +
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAKDILQ+EMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y+QKCVD+GKDVNLQ+AI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCW+GIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563  SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V  QRLLI+K DI  LQ+R S +E GWHDLV++GFIEY+DTEE
Sbjct: 623  YGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDTEE 675



 Score =  369 bits (947), Expect = 4e-99
 Identities = 187/242 (77%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 710  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 769

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 770  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 829

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++QEE+ 
Sbjct: 830  KMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQ 889

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RY++RD S S+RHSE+G+VDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 890  GQAARYSKRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 949

Query: 8    KG 3
            KG
Sbjct: 950  KG 951


>ref|XP_002867829.1| hypothetical protein ARALYDRAFT_492703 [Arabidopsis lyrata subsp.
            lyrata] gi|297313665|gb|EFH44088.1| hypothetical protein
            ARALYDRAFT_492703 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1159 bits (2997), Expect = 0.0
 Identities = 571/653 (87%), Positives = 616/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 21   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 81   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 141  GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 200

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYVGEVRSMAENQNRPPS+MFVRML+R S KGGSSGQ+
Sbjct: 201  IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSSGQY 260

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IR TLPYIR++IPIIIVFRALGFVADKDILEHICYDF+D  MMELLRPSLEEAFVIQ+Q 
Sbjct: 261  IRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQL 320

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVG+GE CETKKAYYFGYIIHRLLLC
Sbjct: 321  VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 380

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 381  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 440

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 501  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SP+VIP ATK+FVNG WVG+HR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 561  SPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V NQRLLI+K DI  LQ+R S++E GWH LVA+GFIEY+DTEE
Sbjct: 621  YGRCSRPLFIVDNQRLLIKKRDIYALQQRESAEEDGWHHLVAKGFIEYIDTEE 673



 Score =  370 bits (951), Expect = 1e-99
 Identities = 188/242 (77%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 708  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 767

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 768  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 827

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R +T GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++Q+E+ 
Sbjct: 828  KMGTLVKEDFGRPDRGSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQ 887

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+GMVDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 888  GQSSRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 947

Query: 8    KG 3
            KG
Sbjct: 948  KG 949


>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
            sinensis]
          Length = 1195

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 570/653 (87%), Positives = 616/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG+Q++
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDF D  MMELLRPSLEEAFVIQ+QQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVT++KRIKYAK+ILQKEMLPHVG G+ CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCWVGIHR+P+ LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI+K DII LQ+R S  D GWHDLVA+GFIEY+DTEE
Sbjct: 623  YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEE 675



 Score =  374 bits (961), Expect = e-100
 Identities = 190/242 (78%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 710  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 769

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 770  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 829

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++Q+E+ 
Sbjct: 830  KMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQ 889

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+GMVDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 890  GQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 949

Query: 8    KG 3
            KG
Sbjct: 950  KG 951


>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
            gi|557525528|gb|ESR36834.1| hypothetical protein
            CICLE_v10027701mg [Citrus clementina]
          Length = 1195

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 570/653 (87%), Positives = 616/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG+Q++
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDF D  MMELLRPSLEEAFVIQ+QQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVT++KRIKYAK+ILQKEMLPHVG G+ CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCWVGIHR+P+ LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V+ QRLLI+K DII LQ+R S  D GWHDLVA+GFIEY+DTEE
Sbjct: 623  YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEE 675



 Score =  374 bits (961), Expect = e-100
 Identities = 190/242 (78%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 710  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 769

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 770  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 829

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++Q+E+ 
Sbjct: 830  KMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQ 889

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+GMVDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 890  GQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 949

Query: 8    KG 3
            KG
Sbjct: 950  KG 951


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1193

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 573/653 (87%), Positives = 615/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDV+KRV KKG +
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVVKKGHD 142

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+L K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQNQQ 322

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y+QKCVD+GKDVNLQ+AI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SPAVIP ATK+FVNGCW+GIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563  SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTD 622

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V  QRLLI+K DI  LQ+R S  D GWHDLV++GFIEY+DTEE
Sbjct: 623  YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEE 675



 Score =  373 bits (957), Expect = e-100
 Identities = 190/242 (78%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 710  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 769

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGY--------------------XXXXXXXXXXX 363
            TTRAMEHLHFRQLPAGINAIVAIACYSGY                               
Sbjct: 770  TTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 829

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R NT GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++QEE+ 
Sbjct: 830  KMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQ 889

Query: 182  GG--RYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+G+VDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 890  GQALRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 949

Query: 8    KG 3
            KG
Sbjct: 950  KG 951


>ref|NP_193902.1| DNA-directed RNA polymerase II subunit RPB2 [Arabidopsis thaliana]
            gi|21542437|sp|P38420.2|NRPB2_ARATH RecName:
            Full=DNA-directed RNA polymerase II subunit 2; AltName:
            Full=DNA-directed RNA polymerase II 135 kDa polypeptide;
            AltName: Full=DNA-directed RNA polymerase II subunit
            RPB2; Short=RNA polymerase II subunit 2; Short=RNA
            polymerase II subunit B2; AltName: Full=Protein EMBRYO
            DEFECTIVE 1989 gi|4455279|emb|CAB36815.1| DNA-directed
            RNA polymerase (EC 2.7.7.6) II second largest chain
            [Arabidopsis thaliana] gi|7268968|emb|CAB81278.1|
            DNA-directed RNA polymerase (EC 2.7.7.6) II second
            largest chain [Arabidopsis thaliana]
            gi|332659093|gb|AEE84493.1| DNA-directed RNA polymerase
            II subunit RPB2 [Arabidopsis thaliana]
          Length = 1188

 Score = 1155 bits (2989), Expect = 0.0
 Identities = 569/653 (87%), Positives = 616/653 (94%), Gaps = 2/653 (0%)
 Frame = -2

Query: 2652 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 2473
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 21   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 2472 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 2293
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 81   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140

Query: 2292 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 2113
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 141  GEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 200

Query: 2112 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 1936
            IAQEKMSTNHVYVFKKRQPNK+AYVGEVRSMAENQNRPPS+MFVRML+R S KGGSSGQ+
Sbjct: 201  IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSSGQY 260

Query: 1935 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1756
            IR TLPYIR++IPIIIVFRALGFVADKDILEHICYDF+D  MMELLRPSLEEAFVIQ+Q 
Sbjct: 261  IRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQL 320

Query: 1755 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1576
            VALDYIGKRGATVGVTKEKRIKYA+DILQKEMLPHVG+GE CETKKAYYFGYIIHRLLLC
Sbjct: 321  VALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGEHCETKKAYYFGYIIHRLLLC 380

Query: 1575 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1396
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 381  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 440

Query: 1395 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1216
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500

Query: 1215 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1036
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 501  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560

Query: 1035 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 856
            SP+VIP ATK+FVNG WVG+HR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 561  SPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620

Query: 855  YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDTEE 700
            YGRCSRPLF+V NQ+LLI+K DI  LQ+R S++E GWH LVA+GFIEY+DTEE
Sbjct: 621  YGRCSRPLFIVDNQKLLIKKRDIYALQQRESAEEDGWHHLVAKGFIEYIDTEE 673



 Score =  370 bits (951), Expect = 1e-99
 Identities = 188/242 (77%), Positives = 200/242 (82%), Gaps = 22/242 (9%)
 Frame = -3

Query: 662  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLV 483
            PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLV
Sbjct: 708  PSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLV 767

Query: 482  TTRAMEHLHFRQLPAGINAIVAIACYSGYXXXXXXXXXXX-------------------- 363
            TTRAMEHLHFRQLPAGINAIVAI+CYSGY                               
Sbjct: 768  TTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEK 827

Query: 362  KMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGLAPPGTRVSGEDVIIGKTTPVTQEESM 183
            KMG+LVKEDFGRP R +T GMRHGSYDKLD+DGLAPPGTRVSGEDVIIGKTTP++Q+E+ 
Sbjct: 828  KMGTLVKEDFGRPDRGSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQ 887

Query: 182  G--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDGLRFVKIRMRSVRIPQIGDKFSSRHGQ 9
            G   RYTRRD S S+RHSE+GMVDQVLLTTN DGLRFVK+R+RSVRIPQIGDKFSSRHGQ
Sbjct: 888  GQSSRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQ 947

Query: 8    KG 3
            KG
Sbjct: 948  KG 949