BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006205
         (592 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containin...    60   3e-07
ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containin...    60   3e-07
ref|XP_004513268.1| PREDICTED: zinc finger CCCH domain-containin...    60   6e-07
gb|EXB97909.1| Zinc finger CCCH domain-containing protein 22 [Mo...    58   2e-06
ref|XP_001771275.1| predicted protein [Physcomitrella patens] gi...    58   2e-06
ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containin...    56   6e-06
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin...    56   6e-06
ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containin...    56   6e-06
ref|XP_003605843.1| Zinc finger CCCH domain-containing protein [...    56   6e-06
ref|XP_004303082.1| PREDICTED: zinc finger CCCH domain-containin...    56   8e-06

>ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
           isoform 2 [Solanum lycopersicum]
          Length = 691

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 46/124 (37%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
 Frame = +3

Query: 252 FGNTVPTRSL---PCPIPDECIDGS--------WKTCVYYAKGYCKNGSSCRFMHL---- 386
           +GN   T  L    C + D  + GS        W+ C+Y+A+G+CKNG+SC+FMH     
Sbjct: 202 YGNCEETPHLHRRSCSVNDVFLGGSDDGGGGFGWRPCMYFARGFCKNGNSCKFMHSGFPD 261

Query: 387 SPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDFLRSKRSSATPNSQVCLPQFPRQRF 566
           S SSPD I              VGS  K DS + DFLR K           L Q  +QRF
Sbjct: 262 SSSSPDAI--------------VGSPSKVDS-VEDFLRMK----------ALQQQQQQRF 296

Query: 567 IASS 578
            A+S
Sbjct: 297 AAAS 300


>ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
           isoform 1 [Solanum lycopersicum]
          Length = 697

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 46/124 (37%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
 Frame = +3

Query: 252 FGNTVPTRSL---PCPIPDECIDGS--------WKTCVYYAKGYCKNGSSCRFMHL---- 386
           +GN   T  L    C + D  + GS        W+ C+Y+A+G+CKNG+SC+FMH     
Sbjct: 202 YGNCEETPHLHRRSCSVNDVFLGGSDDGGGGFGWRPCMYFARGFCKNGNSCKFMHSGFPD 261

Query: 387 SPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDFLRSKRSSATPNSQVCLPQFPRQRF 566
           S SSPD I              VGS  K DS + DFLR K           L Q  +QRF
Sbjct: 262 SSSSPDAI--------------VGSPSKVDS-VEDFLRMK----------ALQQQQQQRF 296

Query: 567 IASS 578
            A+S
Sbjct: 297 AAAS 300


>ref|XP_004513268.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Cicer arietinum]
          Length = 655

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
 Frame = +3

Query: 15  PAKVSTPPMTASPFAPRVGTHHATTSALSPHA---PPWGTHKSSSSSMPLTANKNSNNFP 185
           P   S+ P + SPF  R  +   TTS+   +    PP  T  + SSS    +   +++ P
Sbjct: 74  PTTPSSTPPSPSPFLSRQNSTTTTTSSRLSNGFNLPPSLTIPNPSSSWATMSEFQNHDDP 133

Query: 186 -----VADP-NSFLIE---LXXXXXXXXXXXFGNTVPTRSLPCPIPDECIDGS------- 317
                V+DP + F ++               +G ++  RS  C + D C+          
Sbjct: 134 FYSNGVSDPIDDFQLQDQLSFLNDSSDPSYGYGGSLHRRS--CSVNDACLASEDPNSGLG 191

Query: 318 WKTCVYYAKGYCKNGSSCRFMHLSPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDFL 497
           WK C+Y+A+GYCKNG+SCRF+H               A ++VG S   ++  DS      
Sbjct: 192 WKPCLYFARGYCKNGTSCRFLH----------GGEADAGSIVG-SPNKIEIMDSCHDQLF 240

Query: 498 RSKRSSATPNSQV 536
           RSK+      SQ+
Sbjct: 241 RSKQQRLAAASQL 253


>gb|EXB97909.1| Zinc finger CCCH domain-containing protein 22 [Morus notabilis]
          Length = 729

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
 Frame = +3

Query: 60  PRVGTHHATTSALSPHAPPWGTHKSSSSSMPLTANKNSNN----FPVADPNSFLIELXXX 227
           P    ++  TS+ S  +    T   S++S+P   N + N+    F + D  SFL E    
Sbjct: 126 PEDHLNNLPTSSSSSSSSSSSTASMSNASLPFYQNGSGNDIMDDFQLQDQLSFLNEAGSL 185

Query: 228 XXXXXXXXFGNTV-----PTRSLP-----CPIPDECIDGS---------WKTCVYYAKGY 350
                     +       P+ S P     C + D C+ G          WK C+Y+A+G+
Sbjct: 186 SPTNDQASSASCFTSYNWPSSSSPVHRRSCSVSDMCLGGGSEDPNSGFGWKPCLYFARGF 245

Query: 351 CKNGSSCRFMHLSPSSPDVILESNTAAPNLVGRSVGSLDK-EDSNLRDFLRSKRSSA 518
           CKNG+SCRF+H    +  +++ S    PN   +    +++    +  + LRSK +S+
Sbjct: 246 CKNGNSCRFLHGGEQADQMVVGS----PNGGNKIENMMEQCHHHHHHELLRSKSASS 298


>ref|XP_001771275.1| predicted protein [Physcomitrella patens]
           gi|162677364|gb|EDQ63835.1| predicted protein
           [Physcomitrella patens]
          Length = 386

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/84 (36%), Positives = 46/84 (54%)
 Frame = +3

Query: 315 SWKTCVYYAKGYCKNGSSCRFMHLSPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDF 494
           +WK C+Y+A+GYCK+GSSCRF+H                    G + GSL++ +  L++ 
Sbjct: 165 AWKPCLYFARGYCKHGSSCRFLHGMDD----------------GMAPGSLERLEIELQEL 208

Query: 495 LRSKRSSATPNSQVCLPQFPRQRF 566
           LR +R+   P S   LPQ   +RF
Sbjct: 209 LRGRRA---PVSIASLPQLYYERF 229


>ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X3 [Solanum tuberosum]
          Length = 692

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
 Frame = +3

Query: 252 FGNTVPTRSL---PCPIPDECIDGS-----------WKTCVYYAKGYCKNGSSCRFMHL- 386
           +GN   T  L    C + D  + GS           W+ C+Y+A+G+CKNG+SC+FMH  
Sbjct: 201 YGNCEETPHLHRRSCSVNDVFLGGSDDGGGGGGGFGWRPCMYFARGFCKNGNSCKFMHSG 260

Query: 387 ---SPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDFLRSKRSSATPNSQVCLPQFPR 557
              S SSPD I              VGS  K DS + DFLR K             Q  +
Sbjct: 261 FPDSSSSPDAI--------------VGSPSKVDS-VDDFLRMK---------ALQQQQQQ 296

Query: 558 QRFIASS 578
           QRF A+S
Sbjct: 297 QRFAAAS 303


>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Solanum tuberosum]
          Length = 695

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
 Frame = +3

Query: 252 FGNTVPTRSL---PCPIPDECIDGS-----------WKTCVYYAKGYCKNGSSCRFMHL- 386
           +GN   T  L    C + D  + GS           W+ C+Y+A+G+CKNG+SC+FMH  
Sbjct: 201 YGNCEETPHLHRRSCSVNDVFLGGSDDGGGGGGGFGWRPCMYFARGFCKNGNSCKFMHSG 260

Query: 387 ---SPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDFLRSKRSSATPNSQVCLPQFPR 557
              S SSPD I              VGS  K DS + DFLR K             Q  +
Sbjct: 261 FPDSSSSPDAI--------------VGSPSKVDS-VDDFLRMK---------ALQQQQQQ 296

Query: 558 QRFIASS 578
           QRF A+S
Sbjct: 297 QRFAAAS 303


>ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Solanum tuberosum]
          Length = 701

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
 Frame = +3

Query: 252 FGNTVPTRSL---PCPIPDECIDGS-----------WKTCVYYAKGYCKNGSSCRFMHL- 386
           +GN   T  L    C + D  + GS           W+ C+Y+A+G+CKNG+SC+FMH  
Sbjct: 201 YGNCEETPHLHRRSCSVNDVFLGGSDDGGGGGGGFGWRPCMYFARGFCKNGNSCKFMHSG 260

Query: 387 ---SPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDFLRSKRSSATPNSQVCLPQFPR 557
              S SSPD I              VGS  K DS + DFLR K             Q  +
Sbjct: 261 FPDSSSSPDAI--------------VGSPSKVDS-VDDFLRMK---------ALQQQQQQ 296

Query: 558 QRFIASS 578
           QRF A+S
Sbjct: 297 QRFAAAS 303


>ref|XP_003605843.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355506898|gb|AES88040.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 666

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 20/186 (10%)
 Frame = +3

Query: 15  PAKVSTPPMTASPFAPRVGTHHATTSALSPHAPP--------WGTHKSSSSSMPLTANKN 170
           P   ST P  +  F  R  +  ++  +   + PP        WG   ++ S      N +
Sbjct: 71  PTPSSTSPSPSPNFLSRQNSSTSSRLSSGFNLPPSLTIPNPSWGATTTTMSMSDQFQNHD 130

Query: 171 SNN----FPVADPNSFLIELXXXXXXXXXXXFGNTVPTRSLPCPIPDECIDGS------- 317
            ++    F + D  SFL +            +G         C + D  + GS       
Sbjct: 131 DSDPIDDFQLQDQLSFLND-----GSDPSYGWGGNSSLHRRSCSVNDAYLAGSEDPSAGL 185

Query: 318 -WKTCVYYAKGYCKNGSSCRFMHLSPSSPDVILESNTAAPNLVGRSVGSLDKEDSNLRDF 494
            WK C+Y+A+GYCKNG+SCRF+H          +++ AA  +VG      +  D    + 
Sbjct: 186 GWKPCLYFARGYCKNGTSCRFLH---------GDASAAAAAIVGSPNKIENMMDQYHHEL 236

Query: 495 LRSKRS 512
           LRSK S
Sbjct: 237 LRSKSS 242


>ref|XP_004303082.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
           [Fragaria vesca subsp. vesca]
          Length = 719

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
 Frame = +3

Query: 252 FGNTVPTRSLPCPIPDECIDG-----SWKTCVYYAKGYCKNGSSCRFMH 383
           +G   P     C + D C++       WK C+YYA+GYCKNG+SCRF+H
Sbjct: 211 WGGGGPLHRRSCSVSDVCLEDPNSGFGWKPCLYYARGYCKNGTSCRFLH 259