BLASTX nr result
ID: Ephedra26_contig00006204
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00006204
(546 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004499760.1| PREDICTED: zinc finger CCCH domain-containin... 92 1e-16
ref|XP_004499759.1| PREDICTED: zinc finger CCCH domain-containin... 92 1e-16
ref|XP_004499757.1| PREDICTED: zinc finger CCCH domain-containin... 92 1e-16
gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Mo... 91 2e-16
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 91 2e-16
emb|CBI28616.3| unnamed protein product [Vitis vinifera] 91 2e-16
emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera] 91 2e-16
gb|EOY17560.1| Zinc finger family protein / RNA recognition moti... 90 3e-16
gb|EOY17559.1| Zinc finger family protein / RNA recognition moti... 90 3e-16
gb|EOY17558.1| Zinc finger family protein / RNA recognition moti... 90 3e-16
gb|EOY17557.1| Zinc finger family protein / RNA recognition moti... 90 3e-16
gb|EOY17556.1| Zinc finger family protein / RNA recognition moti... 90 3e-16
gb|EOY17555.1| Zinc finger family protein / RNA recognition moti... 90 3e-16
gb|EOY17554.1| Zinc finger family protein / RNA recognition moti... 90 3e-16
ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part... 90 4e-16
tpg|DAA64156.1| TPA: putative RNA-binding zinc finger family pro... 89 5e-16
tpg|DAA64155.1| TPA: putative RNA-binding zinc finger family pro... 89 5e-16
tpg|DAA64154.1| TPA: putative RNA-binding zinc finger family pro... 89 5e-16
tpg|DAA64153.1| TPA: putative RNA-binding zinc finger family pro... 89 5e-16
ref|NP_001152488.1| nucleic acid binding protein [Zea mays] gi|1... 89 5e-16
>ref|XP_004499760.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X4 [Cicer arietinum]
Length = 624
Score = 91.7 bits (226), Expect = 1e-16
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA++IVF+RIQ M+PENASKI+G LLLQD GE+EMIRLAF P+S S+I KA+++
Sbjct: 1 MDGYEATKIVFSRIQNMDPENASKIMGLLLLQDHGEKEMIRLAFGPESLVHSVIFKARKE 60
Query: 479 LGFLGNPGIVGSSSSDAT 532
LG L P + SSS+ AT
Sbjct: 61 LGLL--PLNLNSSSASAT 76
>ref|XP_004499759.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X3 [Cicer arietinum]
Length = 704
Score = 91.7 bits (226), Expect = 1e-16
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA++IVF+RIQ M+PENASKI+G LLLQD GE+EMIRLAF P+S S+I KA+++
Sbjct: 1 MDGYEATKIVFSRIQNMDPENASKIMGLLLLQDHGEKEMIRLAFGPESLVHSVIFKARKE 60
Query: 479 LGFLGNPGIVGSSSSDAT 532
LG L P + SSS+ AT
Sbjct: 61 LGLL--PLNLNSSSASAT 76
>ref|XP_004499757.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Cicer arietinum]
gi|502127569|ref|XP_004499758.1| PREDICTED: zinc finger
CCCH domain-containing protein 53-like isoform X2 [Cicer
arietinum]
Length = 706
Score = 91.7 bits (226), Expect = 1e-16
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA++IVF+RIQ M+PENASKI+G LLLQD GE+EMIRLAF P+S S+I KA+++
Sbjct: 1 MDGYEATKIVFSRIQNMDPENASKIMGLLLLQDHGEKEMIRLAFGPESLVHSVIFKARKE 60
Query: 479 LGFLGNPGIVGSSSSDAT 532
LG L P + SSS+ AT
Sbjct: 61 LGLL--PLNLNSSSASAT 76
>gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Morus notabilis]
Length = 563
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/80 (61%), Positives = 60/80 (75%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD+YEASR VF+RIQ +EPENA+KI+GYLL+QD GE+EMIRLAF P+S +LI KAK
Sbjct: 1 MDSYEASRTVFSRIQSLEPENATKIMGYLLIQDYGEKEMIRLAFGPESLLHNLIIKAKTH 60
Query: 479 LGFLGNPGIVGSSSSDATYF 538
L L P SSSS ++ F
Sbjct: 61 LAIL--PKSSSSSSSSSSIF 78
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/63 (69%), Positives = 54/63 (85%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD+YEA+RIVF+RIQ ++PENASKI+GYLL+QD GE+EMIRLAF P++ SLI KAK
Sbjct: 1 MDSYEATRIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLILKAKTH 60
Query: 479 LGF 487
LGF
Sbjct: 61 LGF 63
>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MDAYEA+RIVF+RIQ ++PENASKI+G LL+QD GE+EMIRLAF P++ S+I KA+++
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGISSNTPSTPSTPSSPSPFL 81
>emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
Length = 682
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MDAYEA+RIVF+RIQ ++PENASKI+G LL+QD GE+EMIRLAF P++ S+I KA+++
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGISSNTPSTPSTPSSPSPFL 81
>gb|EOY17560.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 7 [Theobroma cacao]
Length = 547
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA+RIVF+RIQ +EPENASKI+G LL+QD GE+EMIRLAF P++ S++ KAK++
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGLPTNSPTTPSTPSSPSPFL 81
>gb|EOY17559.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 6 [Theobroma cacao]
Length = 641
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA+RIVF+RIQ +EPENASKI+G LL+QD GE+EMIRLAF P++ S++ KAK++
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGLPTNSPTTPSTPSSPSPFL 81
>gb|EOY17558.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 5 [Theobroma cacao]
Length = 601
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA+RIVF+RIQ +EPENASKI+G LL+QD GE+EMIRLAF P++ S++ KAK++
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGLPTNSPTTPSTPSSPSPFL 81
>gb|EOY17557.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 4 [Theobroma cacao]
Length = 691
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA+RIVF+RIQ +EPENASKI+G LL+QD GE+EMIRLAF P++ S++ KAK++
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGLPTNSPTTPSTPSSPSPFL 81
>gb|EOY17556.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 3 [Theobroma cacao]
Length = 636
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA+RIVF+RIQ +EPENASKI+G LL+QD GE+EMIRLAF P++ S++ KAK++
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGLPTNSPTTPSTPSSPSPFL 81
>gb|EOY17555.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 2 [Theobroma cacao]
Length = 693
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA+RIVF+RIQ +EPENASKI+G LL+QD GE+EMIRLAF P++ S++ KAK++
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGLPTNSPTTPSTPSSPSPFL 81
>gb|EOY17554.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 1 [Theobroma cacao]
Length = 724
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/81 (56%), Positives = 60/81 (74%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MD YEA+RIVF+RIQ +EPENASKI+G LL+QD GE+EMIRLAF P++ S++ KAK++
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 479 LGFLGNPGIVGSSSSDATYFL 541
LG N S+ S + FL
Sbjct: 61 LGLPTNSPTTPSTPSSPSPFL 81
>ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus
trichocarpa] gi|550331093|gb|EEE87307.2| hypothetical
protein POPTR_0009s05520g, partial [Populus trichocarpa]
Length = 728
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Frame = +2
Query: 296 SMDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKR 475
+MD+YEA+ IVF+RIQ +EPENASKI+GYLLLQD GE+EMIRLAF P++ ++LI + K
Sbjct: 43 TMDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKT 102
Query: 476 DLGFLGN------PGIVGSSSSDATY 535
LGF N P + SS Y
Sbjct: 103 QLGFPSNTPSTPSPAFIPSSRPSPLY 128
>tpg|DAA64156.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 661
Score = 89.4 bits (220), Expect = 5e-16
Identities = 38/68 (55%), Positives = 59/68 (86%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MDAYEA+++VF+RIQ ++P++A+KI+G+LL+QD GE+EMIRLAF P++ +++ KA++D
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 479 LGFLGNPG 502
LG L +PG
Sbjct: 61 LGLLPSPG 68
>tpg|DAA64155.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 652
Score = 89.4 bits (220), Expect = 5e-16
Identities = 38/68 (55%), Positives = 59/68 (86%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MDAYEA+++VF+RIQ ++P++A+KI+G+LL+QD GE+EMIRLAF P++ +++ KA++D
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 479 LGFLGNPG 502
LG L +PG
Sbjct: 61 LGLLPSPG 68
>tpg|DAA64154.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 486
Score = 89.4 bits (220), Expect = 5e-16
Identities = 38/68 (55%), Positives = 59/68 (86%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MDAYEA+++VF+RIQ ++P++A+KI+G+LL+QD GE+EMIRLAF P++ +++ KA++D
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 479 LGFLGNPG 502
LG L +PG
Sbjct: 61 LGLLPSPG 68
>tpg|DAA64153.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 734
Score = 89.4 bits (220), Expect = 5e-16
Identities = 38/68 (55%), Positives = 59/68 (86%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MDAYEA+++VF+RIQ ++P++A+KI+G+LL+QD GE+EMIRLAF P++ +++ KA++D
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 479 LGFLGNPG 502
LG L +PG
Sbjct: 61 LGLLPSPG 68
>ref|NP_001152488.1| nucleic acid binding protein [Zea mays] gi|195656755|gb|ACG47845.1|
nucleic acid binding protein [Zea mays]
Length = 653
Score = 89.4 bits (220), Expect = 5e-16
Identities = 38/68 (55%), Positives = 59/68 (86%)
Frame = +2
Query: 299 MDAYEASRIVFTRIQCMEPENASKIVGYLLLQDRGEQEMIRLAFSPDSSFKSLIEKAKRD 478
MDAYEA+++VF+RIQ ++P++A+KI+G+LL+QD GE+EMIRLAF P++ +++ KA++D
Sbjct: 1 MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKD 60
Query: 479 LGFLGNPG 502
LG L +PG
Sbjct: 61 LGLLPSPG 68