BLASTX nr result

ID: Ephedra26_contig00006192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00006192
         (1490 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             142   3e-31

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  142 bits (359), Expect = 3e-31
 Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 12/365 (3%)
 Frame = -1

Query: 1490 LGDAVCSSLYVNKPTGFSDGRCAVVRLVRGMNSF-QIMEAQKILINHLENSDFEP--KSA 1320
            L DAV S + +       + + + V+L   ++SF +I+E QK+++  L  S+  P  +  
Sbjct: 337  LADAVFSMVDIK------ECQYSTVQLFENIDSFPKIIELQKLILRDLTRSENIPQIRKH 390

Query: 1319 NEGRNKIGNILRNIPAFIYIDNLEGDEELKELLPRDLNKAKKLRLLLTCRDYNHCMTLKL 1140
             +G+ ++  +L ++ AFIYIDN  G+ EL +LLP DL+KAKK+RLL+T RD N   +  L
Sbjct: 391  EDGQRELSRVLEDVSAFIYIDNALGERELGQLLPEDLSKAKKVRLLITARDLNVRKSCPL 450

Query: 1139 SRPAVFHRMKPLSEEDAREFIHEHL--GKEAWFNDTIGKEIADMCRGIPQLLDDIVTYL- 969
                  +RMK +S  +A   +   +    E          I   C GIP +L  +   L 
Sbjct: 451  KTAPKEYRMKAISSMEATNLLKMEMFGHMETILYSYQVNHIIKKCGGIPLMLKLVARALR 510

Query: 968  MGRGEDGLEIVKDEYKYCSGR--FRERLVK-MXXXXXXXXXXXXXXLDILYFFKQETWDE 798
              + ++ ++ V DE +   G    R+++   +              LDI  +F+   W+ 
Sbjct: 511  FAKDKEEVDQVLDELEKLKGEDFGRDKIESYLFAYDKLPEDCKDPFLDICSYFEGWDWEI 570

Query: 797  VKHIVRTDILEKLACKSLVEKTQQGAIKIDDVLSYITEEEARKTR--FTTEQQIQEFLQA 624
            V +I+    L+ LA ++L+ K   G I + DV+  +   ++   R  F +  Q ++FL  
Sbjct: 571  VANIMGGRELKMLADRALITKNTNGVISVHDVILTLGRRKSEGVRFMFISGSQFKKFLDK 630

Query: 623  EKHPHRLEGMKNIKGISVPSTMDIV-IPCTLLDHVQGSIRVLKLGMKGKIEGECKESFEK 447
            +K     E ++ IKGI      D++ I  T+LD +  S+R+L+LG   KIEG+C E FE 
Sbjct: 631  KKE----EEIQKIKGIWFSENKDLLSISATILDSMHKSLRILRLGKLTKIEGKCSEIFES 686

Query: 446  LIYLD 432
            LI+ +
Sbjct: 687  LIFFE 691


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