BLASTX nr result
ID: Ephedra26_contig00006006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00006006
(627 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK236... 155 7e-36
gb|AFK46555.1| unknown [Lotus japonicus] 151 2e-34
gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus... 149 8e-34
ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II su... 148 1e-33
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su... 148 1e-33
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ... 146 4e-33
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin... 146 5e-33
ref|XP_002973726.1| hypothetical protein SELMODRAFT_173532 [Sela... 145 7e-33
ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II su... 144 2e-32
gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus pe... 143 4e-32
gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK... 143 4e-32
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su... 143 4e-32
emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera] 143 4e-32
ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa poly... 142 1e-31
ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Caps... 141 1e-31
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su... 141 1e-31
ref|XP_001753081.1| predicted protein [Physcomitrella patens] gi... 141 2e-31
ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutr... 140 4e-31
ref|XP_004135939.1| PREDICTED: DNA-directed RNA polymerase II su... 140 4e-31
ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II su... 140 4e-31
>gb|ABK22069.1| unknown [Picea sitchensis] gi|116785114|gb|ABK23600.1| unknown
[Picea sitchensis] gi|116790373|gb|ABK25590.1| unknown
[Picea sitchensis] gi|224284720|gb|ACN40091.1| unknown
[Picea sitchensis]
Length = 120
Score = 155 bits (393), Expect = 7e-36
Identities = 76/89 (85%), Positives = 83/89 (93%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
TFVIEREDHTIGNI+RMQLHRDPNVLFAGYKLPHPLQYKILLRIQT+SQSSPMQAYNLAI
Sbjct: 32 TFVIEREDHTIGNIVRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTTSQSSPMQAYNLAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY*EAL 267
+DLDKELDHLK +FE+E+ R QS+ E L
Sbjct: 92 DDLDKELDHLKRSFEDEMVRLQSENREGL 120
>gb|AFK46555.1| unknown [Lotus japonicus]
Length = 116
Score = 151 bits (381), Expect = 2e-34
Identities = 71/85 (83%), Positives = 78/85 (91%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN +I
Sbjct: 32 SFTIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQSI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELDHLKNAFE ++ RF DY
Sbjct: 92 NDLDKELDHLKNAFEADMLRFSRDY 116
>gb|ESW03389.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
Length = 116
Score = 149 bits (375), Expect = 8e-34
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IERE+HTIGNILRMQLHRDPNVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN +I
Sbjct: 32 SFTIEREEHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLD+ELDHLKNAFE E+ +F DY
Sbjct: 92 NDLDRELDHLKNAFEAEMLKFSRDY 116
>ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Solanum lycopersicum] gi|565346226|ref|XP_006340167.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 11-like [Solanum tuberosum]
Length = 116
Score = 148 bits (373), Expect = 1e-33
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
TF +EREDHTIGNI+RMQLHRD NVLFAGYKLPHPLQYKILLRIQT+SQSSPMQAYN AI
Sbjct: 32 TFTVEREDHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKILLRIQTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELDHLK+ FE E+++ DY
Sbjct: 92 NDLDKELDHLKSQFEGELAKHTRDY 116
>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Cucumis sativus] gi|449516703|ref|XP_004165386.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Cucumis sativus]
Length = 116
Score = 148 bits (373), Expect = 1e-33
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IERE+HTIGNILRMQLHRD NVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN AI
Sbjct: 32 SFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELDHLKNAFE E ++F DY
Sbjct: 92 NDLDKELDHLKNAFEAEFAKFSRDY 116
>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
[Glycine max]
Length = 116
Score = 146 bits (369), Expect = 4e-33
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IERE+HTIGNILRMQLHRDPNVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN +I
Sbjct: 32 SFTIEREEHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLD+ELDHLK+AFE E+ +F DY
Sbjct: 92 NDLDRELDHLKSAFEAEMLKFSRDY 116
>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
gi|255626235|gb|ACU13462.1| unknown [Glycine max]
Length = 116
Score = 146 bits (368), Expect = 5e-33
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IERE+HTIGNILRMQLHRDPNVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN ++
Sbjct: 32 SFTIEREEHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSV 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLD+ELDHLK+AFE E+ +F DY
Sbjct: 92 NDLDRELDHLKSAFEAEMLKFSRDY 116
>ref|XP_002973726.1| hypothetical protein SELMODRAFT_173532 [Selaginella moellendorffii]
gi|302788013|ref|XP_002975776.1| hypothetical protein
SELMODRAFT_150734 [Selaginella moellendorffii]
gi|300156777|gb|EFJ23405.1| hypothetical protein
SELMODRAFT_150734 [Selaginella moellendorffii]
gi|300158764|gb|EFJ25386.1| hypothetical protein
SELMODRAFT_173532 [Selaginella moellendorffii]
Length = 117
Score = 145 bits (367), Expect = 7e-33
Identities = 64/84 (76%), Positives = 81/84 (96%)
Frame = +1
Query: 4 FVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAIN 183
F I+REDHT+GN++RMQLHRDPNVLFAGYKLPHPLQYKI++++QT+SQSSP+QAYNLA++
Sbjct: 33 FTIQREDHTVGNVVRMQLHRDPNVLFAGYKLPHPLQYKIIVKVQTTSQSSPIQAYNLALS 92
Query: 184 DLDKELDHLKNAFENEVSRFQSDY 255
DLDKEL+HLK AFE+EV++ Q+DY
Sbjct: 93 DLDKELEHLKRAFESEVAQRQTDY 116
>ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like [Cicer
arietinum] gi|502152948|ref|XP_004509165.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB11-like
isoform X1 [Cicer arietinum]
gi|502152950|ref|XP_004509166.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB11-like isoform X2 [Cicer
arietinum]
Length = 116
Score = 144 bits (364), Expect = 2e-32
Identities = 68/85 (80%), Positives = 75/85 (88%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTI NILRMQLHRDPNVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN +I
Sbjct: 32 SFTIEREDHTIANILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPMQAYNQSI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELD LKN FE E+ +F DY
Sbjct: 92 NDLDKELDQLKNGFEAELLKFSKDY 116
>gb|EMJ02624.1| hypothetical protein PRUPE_ppa013559mg [Prunus persica]
Length = 116
Score = 143 bits (361), Expect = 4e-32
Identities = 68/85 (80%), Positives = 76/85 (89%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTIGNILRMQLHRD NVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN AI
Sbjct: 32 SFTIEREDHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELDHLK+ FE EV++ +Y
Sbjct: 92 NDLDKELDHLKSCFEAEVAKHSVEY 116
>gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK47762.1| unknown
[Medicago truncatula]
Length = 116
Score = 143 bits (361), Expect = 4e-32
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTIGNILRMQLH+DPNVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN +I
Sbjct: 32 SFTIEREDHTIGNILRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELD LK+ FE E+ +F DY
Sbjct: 92 NDLDKELDTLKSGFEAELLKFSKDY 116
>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
product [Vitis vinifera]
Length = 116
Score = 143 bits (361), Expect = 4e-32
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F +EREDHTIGNILRMQLHRD NVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN AI
Sbjct: 32 SFTVEREDHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELD+LKNAFE E+++ +Y
Sbjct: 92 NDLDKELDYLKNAFEVELAKHSREY 116
>emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]
Length = 129
Score = 143 bits (361), Expect = 4e-32
Identities = 67/85 (78%), Positives = 77/85 (90%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F +EREDHTIGNILRMQLHRD NVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN AI
Sbjct: 45 SFTVEREDHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAI 104
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELD+LKNAFE E+++ +Y
Sbjct: 105 NDLDKELDYLKNAFEVELAKHSREY 129
>ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa polypeptide family protein
[Populus trichocarpa] gi|566186802|ref|XP_006379118.1|
hypothetical protein POPTR_0009s07520g [Populus
trichocarpa] gi|118484276|gb|ABK94017.1| unknown
[Populus trichocarpa] gi|222849662|gb|EEE87209.1|
DNA-directed RNA polymerase II 13.6 kDa polypeptide
family protein [Populus trichocarpa]
gi|550331237|gb|ERP56915.1| hypothetical protein
POPTR_0009s07520g [Populus trichocarpa]
Length = 116
Score = 142 bits (357), Expect = 1e-31
Identities = 67/85 (78%), Positives = 75/85 (88%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F +EREDHTIGNILRMQLHRD NVLFAGYKLPHPL+YKI++RI T+SQSSPMQAYN AI
Sbjct: 32 SFTVEREDHTIGNILRMQLHRDDNVLFAGYKLPHPLKYKIIVRIHTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELDHLKNAFE E++ Y
Sbjct: 92 NDLDKELDHLKNAFEAELANRPGQY 116
>ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Capsella rubella]
gi|482560776|gb|EOA24967.1| hypothetical protein
CARUB_v10018264mg [Capsella rubella]
Length = 116
Score = 141 bits (356), Expect = 1e-31
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTIGNI+RMQLHRD NVLFAGY+LPHPL+YKI++RI T+SQSSPMQAYN AI
Sbjct: 32 SFTIEREDHTIGNIVRMQLHRDENVLFAGYQLPHPLKYKIIVRIHTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELD+LKN FE EV++F + Y
Sbjct: 92 NDLDKELDYLKNQFEAEVAKFSNQY 116
>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 2 [Fragaria vesca subsp. vesca]
Length = 118
Score = 141 bits (356), Expect = 1e-31
Identities = 70/87 (80%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTIGNILRMQLHRD NVLFAGYKLPHPLQYKI++RI T+SQSSPMQAYN AI
Sbjct: 32 SFTIEREDHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSR--FQSDY 255
NDLDKELDHLK+ FE EV++ Q DY
Sbjct: 92 NDLDKELDHLKSNFEAEVAKHSMQVDY 118
>ref|XP_001753081.1| predicted protein [Physcomitrella patens]
gi|162695780|gb|EDQ82122.1| predicted protein
[Physcomitrella patens]
Length = 117
Score = 141 bits (355), Expect = 2e-31
Identities = 63/85 (74%), Positives = 78/85 (91%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
TF +EREDHT+GN++RMQLHRDP+VLFAGY+LPHPLQY+++++IQT+SQSSPMQAYNLAI
Sbjct: 32 TFTVEREDHTVGNVIRMQLHRDPSVLFAGYRLPHPLQYRLVVKIQTTSQSSPMQAYNLAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
DL KELDHLK FE+E S+ Q+DY
Sbjct: 92 TDLIKELDHLKAVFEHETSQKQADY 116
>ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutrema salsugineum]
gi|557104965|gb|ESQ45299.1| hypothetical protein
EUTSA_v10010833mg [Eutrema salsugineum]
Length = 116
Score = 140 bits (352), Expect = 4e-31
Identities = 65/85 (76%), Positives = 77/85 (90%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTIGNI+RMQLHRD NVLFAGY+LPHPL+YKI++RI T+SQSSPMQAYN AI
Sbjct: 32 SFTIEREDHTIGNIVRMQLHRDENVLFAGYQLPHPLKYKIIVRIHTTSQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKEL++LKN FE EV++F + Y
Sbjct: 92 NDLDKELEYLKNQFEAEVAKFSTQY 116
>ref|XP_004135939.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
[Cucumis sativus] gi|449488830|ref|XP_004158185.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB11-like [Cucumis sativus]
Length = 116
Score = 140 bits (352), Expect = 4e-31
Identities = 67/85 (78%), Positives = 75/85 (88%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
TF++EREDHTIGNILRMQLHRD NVLFAGY+LPHPL+Y+IL+RIQT+SQSSPMQAYN AI
Sbjct: 32 TFILEREDHTIGNILRMQLHRDDNVLFAGYQLPHPLKYRILVRIQTASQSSPMQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQSDY 255
NDLDKELD LK E E+SRF Y
Sbjct: 92 NDLDKELDVLKYELEGEISRFSRAY 116
>ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
isoform 1 [Brachypodium distachyon]
gi|357159117|ref|XP_003578344.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB11-like isoform 2
[Brachypodium distachyon]
Length = 119
Score = 140 bits (352), Expect = 4e-31
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = +1
Query: 1 TFVIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTSSQSSPMQAYNLAI 180
+F IEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKI++RI T+SQSSP QAYN AI
Sbjct: 32 SFTIEREDHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTASQSSPTQAYNQAI 91
Query: 181 NDLDKELDHLKNAFENEVSRFQ 246
NDLD EL++LK AFE+E +RF+
Sbjct: 92 NDLDSELENLKQAFEDEKNRFE 113