BLASTX nr result
ID: Ephedra26_contig00005977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00005977
(463 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK24755.1| unknown [Picea sitchensis] 93 3e-17
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228... 78 1e-12
ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218... 78 1e-12
ref|XP_002308472.2| RNA recognition motif-containing family prot... 74 3e-11
emb|CBI28315.3| unnamed protein product [Vitis vinifera] 73 3e-11
ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop... 73 3e-11
gb|EOY33421.1| RNA-binding family protein isoform 1 [Theobroma c... 73 4e-11
ref|XP_006855084.1| hypothetical protein AMTR_s00031p00165100 [A... 72 6e-11
ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi... 72 8e-11
gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);... 72 8e-11
ref|XP_002523815.1| nucleolar phosphoprotein, putative [Ricinus ... 72 1e-10
gb|EOX95603.1| RNA-binding family protein isoform 1 [Theobroma c... 71 2e-10
ref|XP_001772239.1| predicted protein [Physcomitrella patens] gi... 71 2e-10
gb|AFK42956.1| unknown [Lotus japonicus] 70 2e-10
gb|ESW34907.1| hypothetical protein PHAVU_001G190900g [Phaseolus... 70 3e-10
gb|ESW11004.1| hypothetical protein PHAVU_009G257300g [Phaseolus... 70 3e-10
ref|XP_004494860.1| PREDICTED: heterogeneous nuclear ribonucleop... 70 3e-10
gb|EMJ19130.1| hypothetical protein PRUPE_ppa004918mg [Prunus pe... 70 3e-10
gb|EMJ03171.1| hypothetical protein PRUPE_ppa004785mg [Prunus pe... 70 3e-10
ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop... 70 3e-10
>gb|ABK24755.1| unknown [Picea sitchensis]
Length = 506
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/82 (56%), Positives = 53/82 (64%)
Frame = +1
Query: 7 NFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLPDG 186
+FQRP NF AGY +QPVIYGRGPTPEGM MVPM+LPDG
Sbjct: 389 SFQRPLFSNFQPQAGY-----GYNPNMYGFGSMGYTQPVIYGRGPTPEGMTMVPMILPDG 443
Query: 187 RIGYVLQQPGAMLGGAAPYGSQ 252
R+GYVLQQPG +GG+APY S+
Sbjct: 444 RVGYVLQQPGNAVGGSAPYRSE 465
>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
Length = 828
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +1
Query: 1 SNNFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLP 180
SN+ + +PN+P GY QP+IYGRGPTP GM M+PM+LP
Sbjct: 700 SNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLP 759
Query: 181 DGRIGYVLQQPGAMLGGAAPY 243
DGRIGYVLQQPG+ + P+
Sbjct: 760 DGRIGYVLQQPGSQMLTPPPH 780
>ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
Length = 784
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +1
Query: 1 SNNFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLP 180
SN+ + +PN+P GY QP+IYGRGPTP GM M+PM+LP
Sbjct: 656 SNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLP 715
Query: 181 DGRIGYVLQQPGAMLGGAAPY 243
DGRIGYVLQQPG+ + P+
Sbjct: 716 DGRIGYVLQQPGSQMLTPPPH 736
>ref|XP_002308472.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550336897|gb|EEE91995.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 478
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +1
Query: 31 NFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQ 210
+FP GY +QPVIYGRGPTP GM M+PM+LPDGRIGYVLQQ
Sbjct: 378 SFPPRVGYSLVGSSYGALGAGFGAAGFAQPVIYGRGPTPAGMSMMPMLLPDGRIGYVLQQ 437
Query: 211 PGAMLGGAAP 240
PG + P
Sbjct: 438 PGMQMHSPPP 447
>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
Length = 434
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = +1
Query: 1 SNNFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLP 180
SN+ + + ++P GY +QP+IYGRGPTP GM M+PM+LP
Sbjct: 317 SNSQKSGLLSSYPPRVGYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLP 376
Query: 181 DGRIGYVLQQPGA 219
DGRIGYVLQQPGA
Sbjct: 377 DGRIGYVLQQPGA 389
>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
vinifera]
Length = 503
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = +1
Query: 1 SNNFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLP 180
SN+ + + ++P GY +QP+IYGRGPTP GM M+PM+LP
Sbjct: 386 SNSQKSGLLSSYPPRVGYGFVGGAYGALGAGYGTAGFAQPLIYGRGPTPAGMAMMPMLLP 445
Query: 181 DGRIGYVLQQPGA 219
DGRIGYVLQQPGA
Sbjct: 446 DGRIGYVLQQPGA 458
>gb|EOY33421.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 480
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = +1
Query: 25 IPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLPDGRIGYVL 204
+P +P + GY +QP+IYGRGPTP GM M+PM+LPDGRIGYVL
Sbjct: 379 LPGYPPHVGYGLVGGAYGALSPGYGVAGLAQPLIYGRGPTPTGMSMMPMLLPDGRIGYVL 438
Query: 205 QQPG 216
QQPG
Sbjct: 439 QQPG 442
>ref|XP_006855084.1| hypothetical protein AMTR_s00031p00165100 [Amborella trichopoda]
gi|548858813|gb|ERN16551.1| hypothetical protein
AMTR_s00031p00165100 [Amborella trichopoda]
Length = 489
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/83 (43%), Positives = 47/83 (56%)
Frame = +1
Query: 4 NNFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLPD 183
N+ + +P +P+ GY QP+IYGRGPTP GM MVPM+LPD
Sbjct: 383 NSHKAGLLPGYPSRLGY--GMDPYGALSAGYGAGAFGQPMIYGRGPTPAGMTMVPMLLPD 440
Query: 184 GRIGYVLQQPGAMLGGAAPYGSQ 252
GR+GYVLQQPGA + + G +
Sbjct: 441 GRLGYVLQQPGAHMPAPSQRGGR 463
>ref|XP_003626597.1| RNA-binding protein [Medicago truncatula]
gi|355501612|gb|AES82815.1| RNA-binding protein
[Medicago truncatula]
Length = 479
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1
Query: 115 QPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAP 240
QP+IYGRGP P GM MVPMVLPDGRIGYVLQQPG + G P
Sbjct: 408 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPGPRP 449
>gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding
EF-hand [Medicago truncatula]
Length = 559
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1
Query: 115 QPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAP 240
QP+IYGRGP P GM MVPMVLPDGRIGYVLQQPG + G P
Sbjct: 488 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPGPRP 529
>ref|XP_002523815.1| nucleolar phosphoprotein, putative [Ricinus communis]
gi|223536903|gb|EEF38541.1| nucleolar phosphoprotein,
putative [Ricinus communis]
Length = 489
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 4 NNFQRPAI-PNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLP 180
+N Q P + P++P GY +QP+IYGRGPTP GM M+PM+LP
Sbjct: 374 SNLQNPGLLPSYPPGGGY--GLIGGAFGALGAGYGAVAQPLIYGRGPTPAGMAMMPMLLP 431
Query: 181 DGRIGYVLQQPG 216
DGRIGYVLQQPG
Sbjct: 432 DGRIGYVLQQPG 443
>gb|EOX95603.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 506
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +1
Query: 115 QPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAP 240
QPVIYGRGP P GM MVPMVLPDGRIGYVLQQPG + P
Sbjct: 405 QPVIYGRGPMPSGMQMVPMVLPDGRIGYVLQQPGVQMPPPRP 446
>ref|XP_001772239.1| predicted protein [Physcomitrella patens]
gi|162676409|gb|EDQ62892.1| predicted protein
[Physcomitrella patens]
Length = 507
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1
Query: 112 SQPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAPY 243
+QP+IYGRG P GM MVPM+LPDGR+GYVLQQP GG APY
Sbjct: 429 NQPIIYGRGLAPAGMTMVPMMLPDGRVGYVLQQPSGGQGGPAPY 472
>gb|AFK42956.1| unknown [Lotus japonicus]
Length = 232
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1
Query: 115 QPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAP 240
QP++YGRGP P GM MVPMVLPDGRIGYVLQQPG + A P
Sbjct: 158 QPMMYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPAARP 199
>gb|ESW34907.1| hypothetical protein PHAVU_001G190900g [Phaseolus vulgaris]
gi|561036378|gb|ESW34908.1| hypothetical protein
PHAVU_001G190900g [Phaseolus vulgaris]
Length = 490
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = +1
Query: 1 SNNFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMMVPMVLP 180
+N + +P +P + GY +QP++YG GPTP GM M+PM+LP
Sbjct: 378 ANQQKSALLPTYPPHLGYGMVGGAYGAIGAGYGAAGFAQPLMYGPGPTPPGMTMIPMLLP 437
Query: 181 DGRIGYVLQQPG 216
DGRIGYVLQQPG
Sbjct: 438 DGRIGYVLQQPG 449
>gb|ESW11004.1| hypothetical protein PHAVU_009G257300g [Phaseolus vulgaris]
Length = 489
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/86 (47%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +1
Query: 1 SNNFQRPAIPNFPTN------AGYPXXXXXXXXXXXXXXXXXXSQPVIYGRGPTPEGMMM 162
SN+ PA NF N AGY QP+IYGRGP P GM M
Sbjct: 377 SNHLPHPAYGNFSGNPYGSLGAGY-------------GVGGGYQQPMIYGRGPMPAGMQM 423
Query: 163 VPMVLPDGRIGYVLQQPGAMLGGAAP 240
VPMVLPDGRIGYVLQQPG + P
Sbjct: 424 VPMVLPDGRIGYVLQQPGVQAPPSRP 449
>ref|XP_004494860.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
X1 [Cicer arietinum] gi|502114100|ref|XP_004494861.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
R-like isoform X2 [Cicer arietinum]
Length = 481
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 115 QPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAP 240
QP+IYGRGP P GM MVPMVLPDGRIGYVLQQPG + P
Sbjct: 407 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPATRP 448
>gb|EMJ19130.1| hypothetical protein PRUPE_ppa004918mg [Prunus persica]
Length = 485
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1
Query: 115 QPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAP 240
QP+IYGRGP P GM MVPMVLPDGRIGYVLQQPGA + P
Sbjct: 412 QPMIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGAQIPTPRP 453
>gb|EMJ03171.1| hypothetical protein PRUPE_ppa004785mg [Prunus persica]
Length = 491
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +1
Query: 1 SNNFQRPAIPNFPTNAGYPXXXXXXXXXXXXXXXXXX--SQPVIYGRGPTPEGMMMVPMV 174
SN+ + P +P +P Y +QP+IYGRGPTP GM M+PM+
Sbjct: 379 SNHQKSPLLPTYPPRLSYGMGGSSPYGGLSAGYGGGAGFAQPLIYGRGPTPAGMAMMPML 438
Query: 175 LPDGRIGYVLQQPG 216
LPDGRIGYVLQQPG
Sbjct: 439 LPDGRIGYVLQQPG 452
>ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform
X1 [Glycine max] gi|571560794|ref|XP_006604909.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
R-like isoform X2 [Glycine max]
Length = 483
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 115 QPVIYGRGPTPEGMMMVPMVLPDGRIGYVLQQPGAMLGGAAP 240
QP+IYGRGP P GM MVPMVLPDGRIGYVLQQPG + P
Sbjct: 407 QPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPATRP 448