BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00005961
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301112.1| PREDICTED: replication protein A 70 kDa DNA-...    64   3e-08
gb|EOY22080.1| Replication protein A 70 kDa DNA-binding subunit ...    63   4e-08
ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-...    62   6e-08
ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Sela...    62   6e-08
ref|NP_001141474.1| Replication protein A DNA-binding subunit [Z...    62   8e-08
gb|EXC04889.1| Replication factor A protein 1 [Morus notabilis]        61   1e-07
ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Sela...    61   1e-07
ref|XP_003631705.1| PREDICTED: LOW QUALITY PROTEIN: replication ...    60   2e-07
gb|EMJ12078.1| hypothetical protein PRUPE_ppa003038mg [Prunus pe...    60   4e-07
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...    60   4e-07
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...    60   4e-07
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-...    60   4e-07
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S...    60   4e-07
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]    60   4e-07
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...    59   5e-07
ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-...    59   7e-07
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...    59   9e-07
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-...    58   1e-06
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...    58   1e-06
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-...    58   2e-06

>ref|XP_004301112.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Fragaria vesca subsp. vesca]
          Length = 606

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           ++A+++VR  D+  +S+ ++ K+ + +DP +PE   LK W+        SM  VG+   P
Sbjct: 363 VVAIKSVRVGDYQGVSLSTVSKSSIVVDPDLPEAKRLKSWYDSE-GKEVSMASVGSGMSP 421

Query: 234 PKT----------ITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKY 377
                        I LS + +     E+    F V A +      +  WY AC +C KK 
Sbjct: 422 SANSGAWSMYSDRIPLSHLKDNPSLGEDKPVFFSVKAYIGPIKSDQTLWYRACKVCNKKV 481

Query: 378 NKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
            + DG        Y+C  C   ++  +L Y L  +  D
Sbjct: 482 TEGDG-------GYWCEGCQKIAEECSLRYILLARAMD 512


>gb|EOY22080.1| Replication protein A 70 kDa DNA-binding subunit [Theobroma cacao]
          Length = 677

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           ++A+++++ +DF  +S+ ++ K+ + I+P +PE  +L+ W+        SM  VG+   P
Sbjct: 431 IVAIKSLKVSDFQGVSLSTLGKSTLLINPDMPEAKNLRSWYDSE-GKGSSMASVGSGLSP 489

Query: 234 PKT---------ITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKYN 380
            K+         ++LS I       EE  A F + A +S    ++  WY AC  C KK  
Sbjct: 490 SKSGARSMYTDRVSLSHITGNPSLGEEKPAFFSIKAFISLIRPEQAMWYRACKSCNKKVT 549

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           +  G        Y+C  C    +  +L Y +  K+ D
Sbjct: 550 EAVGSG------YWCEGCQKNDEECSLRYIMVSKISD 580


>ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Setaria italica]
          Length = 623

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           ++A+R++R +DF  +S+ ++ K+ + ++P +PE  +LK W+        SM  +GA    
Sbjct: 378 IIAIRSLRVSDFQGVSLSTVGKSTLMVNPDLPEVHNLKSWYDNE-GKGTSMAPIGADMGA 436

Query: 234 PKT----------ITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKY 377
            +           + LS I  +    +E    F ++A++S+    +  WY AC  C KK 
Sbjct: 437 ARAGGLRSMYSDRVFLSHITSDPNMGQEKPVFFSLNAIISHIKPDQNMWYRACKTCNKKV 496

Query: 378 NKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
            +  G        Y+C  C       +L Y + +K+ D
Sbjct: 497 TEAVGGG------YWCEGCNKNDAECSLRYIMVIKVSD 528


>ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Selaginella moellendorffii]
           gi|300168431|gb|EFJ35034.1| hypothetical protein
           SELMODRAFT_141493 [Selaginella moellendorffii]
          Length = 566

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
 Frame = +3

Query: 39  PGAPFMLALRNVRCTDF-AHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRP--SMG 209
           P AP ++ +R+VR  DF A +S+ +   + V+I+P IPE   L+ W+ +        S+G
Sbjct: 322 PDAP-VVVIRSVRANDFQAGVSLSTSPNSMVWINPDIPEARELRSWYDESGKDATLTSVG 380

Query: 210 FVGATRFPPKTITLSEIHEERRTT----EEASFLVSAVVSNFDMQRPQWYTACVLCKKKY 377
              + R  P     ++I +    +    + A F V A +S     +  WYTAC  C +K 
Sbjct: 381 AGLSQRAGPTNDNRADISDITAPSVGEGKAAYFTVRACISYIKPDQTMWYTACSTCNRKV 440

Query: 378 NKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           ++       +  +++C AC    DT +  Y +  KL D
Sbjct: 441 SE-------DSSRFWCEACQRHFDTASRRYIMLAKLTD 471


>ref|NP_001141474.1| Replication protein A DNA-binding subunit [Zea mays]
           gi|194704722|gb|ACF86445.1| unknown [Zea mays]
           gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
           DNA-binding subunit [Zea mays]
           gi|413956552|gb|AFW89201.1| Replication protein A
           DNA-binding subunit [Zea mays]
          Length = 623

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWF---SQLCHSRPSMGFVGAT 224
           ++A+++++ +DF  +S+ +I ++ + I+P +PE  +LK W+    +     P    VGAT
Sbjct: 378 VVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSEGKDTSLAPISAEVGAT 437

Query: 225 R------FPPKTITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKYN 380
           R           + LS I  +    +E    F + A++S+    +  WY AC  C KK  
Sbjct: 438 RAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPDQNMWYRACTTCNKKVT 497

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           +  G        Y+C  C       +L Y + +KL D
Sbjct: 498 EAFGSG------YWCEGCQKNYSECSLRYIMVIKLSD 528


>gb|EXC04889.1| Replication factor A protein 1 [Morus notabilis]
          Length = 628

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           ++A+++V+  DF  LS+ ++ ++ V ++P  PE   LK W+       P M  VG T   
Sbjct: 382 VVAIKSVKVGDFQGLSLSALSRSMVVVNPDTPEANKLKSWYDSEGKGSP-MASVG-TGMS 439

Query: 234 PKT-----------ITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKK 374
           P T           + LS I +     E+  A F +   +S+    +  WY AC  C KK
Sbjct: 440 PSTRSGGRSMYSDRVFLSHITDNPSLGEDKPAFFSIRGYISSIKPDQTMWYRACKTCNKK 499

Query: 375 YNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
             +  G        Y+C  C    +  +L Y L +++ D
Sbjct: 500 VTEAIGSG------YWCEGCQKNDEECSLRYILVVRVSD 532


>ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Selaginella moellendorffii]
           gi|300150791|gb|EFJ17440.1| hypothetical protein
           SELMODRAFT_114787 [Selaginella moellendorffii]
          Length = 566

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
 Frame = +3

Query: 39  PGAPFMLALRNVRCTDF-AHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFV 215
           P AP ++ +R+VR  DF A +S+ +   + V+I+P IPE   L+ W+ +      ++  V
Sbjct: 322 PDAP-VVVIRSVRANDFQAGVSLSTSPNSMVWINPDIPEARELRSWYDE-SGKDATLTSV 379

Query: 216 GA-----------TRFPPKTITLSEIHEERRTTEEASFLVSAVVSNFDMQRPQWYTACVL 362
           GA            R     IT   + E +     A F V A +S     +  WYTAC  
Sbjct: 380 GAGLSQRAGSANDNRADISDITAPSVGEGKA----AYFTVRACISYIKPDQTMWYTACST 435

Query: 363 CKKKYNKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           C +K ++       +  +++C AC    DT +  Y +  KL D
Sbjct: 436 CNRKVSE-------DSSRFWCEACQRHFDTASRRYIMLAKLTD 471


>ref|XP_003631705.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
           [Vitis vinifera]
          Length = 389

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           ++A+++++  DF  +S+ ++ K+   ++P  PE+  L+ W+        SM  +G+   P
Sbjct: 141 IIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHDYHGKVASMACIGSDISP 200

Query: 234 PK----------TITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKY 377
                        ++LS +       E+  + F + A +S    ++  WY AC  C KK 
Sbjct: 201 SSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPEQTMWYQACKTCNKKV 260

Query: 378 NKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQDDN 497
              D    G    Y+C  C    D  +  Y + +K+ DD+
Sbjct: 261 T--DAIESG----YWCEGCEKNDDECSXRYIMVVKVSDDS 294


>gb|EMJ12078.1| hypothetical protein PRUPE_ppa003038mg [Prunus persica]
          Length = 609

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWF---------SQLCHSRPSM 206
           ++A+++++  DF  +S+ ++ ++ V ++P +PE   L+ W+         + + +    +
Sbjct: 362 IVAIKSLKVGDFQGVSLSTLSRSTVVVNPELPEAKRLRSWYDSEGKGASLASVGNGMSPL 421

Query: 207 GFVGATRFPPKTITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKYN 380
              GA       ++LS I ++    E+    F V A +S+    +  WY AC  C KK  
Sbjct: 422 AKSGARSMYSDRVSLSHISDDPSLGEDKPVFFSVKAFISSIRPDQALWYRACKTCNKKVT 481

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           +  G        Y+C AC    +  +L Y L  ++ D
Sbjct: 482 EAIGSG------YWCEACQKNDEECSLRYILVARVTD 512


>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQ----LCHSRPSMGFVGA 221
           ++AL+ +R  DF  +S+ +I ++ + I+P I E   L+ W+      +  S  S G   +
Sbjct: 314 IIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPS 373

Query: 222 TRFPPKT-----ITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKYN 380
           T+   ++     I+LS I E +   EE    F + A VS     +  WY AC  C KK  
Sbjct: 374 TKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACKTCNKKVT 433

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           +  G        Y+C  C    +  +L Y + +++ D
Sbjct: 434 EAIGSG------YWCDNCQKNDEECSLRYIMVVRVSD 464


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQ----LCHSRPSMGFVGA 221
           ++AL+ +R  DF  +S+ +I ++ + I+P I E   L+ W+      +  S  S G   +
Sbjct: 357 IIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPS 416

Query: 222 TRFPPKT-----ITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKYN 380
           T+   ++     I+LS I E +   EE    F + A VS     +  WY AC  C KK  
Sbjct: 417 TKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACKTCNKKVT 476

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           +  G        Y+C  C    +  +L Y + +++ D
Sbjct: 477 EAIGSG------YWCDNCQKNDEECSLRYIMVVRVSD 507


>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Brachypodium distachyon]
          Length = 635

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           ++A+++++ +DF  +S+ ++ K+ + I+P +PE   L+ W+        SM  VGA    
Sbjct: 390 VIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEADKLRTWYESE-GKGTSMASVGADMGA 448

Query: 234 PKT----------ITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKY 377
            +T          + LS I  +    ++    F ++A +S+    +  WY AC  C KK 
Sbjct: 449 SRTGGSRSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISHIKPDQTMWYRACKTCNKKV 508

Query: 378 NKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
            +  G        Y+C  C    +   L Y + +K+ D
Sbjct: 509 TEAVGSG------YWCEGCQKNYEECMLRYIMAIKVSD 540


>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
           gi|241922132|gb|EER95276.1| hypothetical protein
           SORBIDRAFT_01g042890 [Sorghum bicolor]
          Length = 623

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWF------SQLCHSRPSMGFV 215
           ++A+++++ +DF  +S+ +I ++ + I+P +PE  ++K W+      + L      MG  
Sbjct: 378 VVAIKSLKVSDFQGVSLSTIGRSTLAINPDLPEAQNVKSWYDSEGKDTSLAPIGAEMGAA 437

Query: 216 ---GATRFPPKTITLSEIHEERRTTEE--ASFLVSAVVSNFDMQRPQWYTACVLCKKKYN 380
              G        + LS I  +    +E    F ++A++S+    +  WY AC  C KK  
Sbjct: 438 RAGGLKSMYSDRVFLSHITSDPAMGQEKPVFFSLNAIISHIKPDQNMWYRACKTCNKKVT 497

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           +  G        Y+C  C       +L Y + LK+ D
Sbjct: 498 EAFGSG------YWCEGCQKNDSECSLRYIMVLKISD 528


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           +LA+++ R  DF   ++ +I  +++FI+P  PE   LK+WF +   + PS+         
Sbjct: 470 VLAVKSARVNDFNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXM 529

Query: 234 PKT---ITLSEIHEER-RTTEEASFLVSAVVSNFDMQRPQWYTACVL------CKKKY-N 380
            +T    T+S+I +ER  T+E+  ++      +F       YTAC +      C KK  N
Sbjct: 530 GRTDVRKTISQIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTN 589

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
             DG       K+ C  C  + D     Y L+ ++QD
Sbjct: 590 NGDG-------KWRCERCDQSVDDCDYRYILQFQIQD 619


>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFP 233
           +LA+++ R  DF   ++ +I  +++FI+P  PE   LK+WF +   + PS+         
Sbjct: 470 VLAVKSARVNDFNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSM 529

Query: 234 PKT---ITLSEIHEER-RTTEEASFLVSAVVSNFDMQRPQWYTACVL------CKKKY-N 380
            +T    T+S+I +ER  T+E+  ++      +F       YTAC +      C KK  N
Sbjct: 530 GRTDVRKTISQIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTN 589

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
             DG       K+ C  C  + D     Y L+ ++QD
Sbjct: 590 NGDG-------KWRCERCDQSVDDCDYRYILQFQIQD 619


>ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
           [Solanum tuberosum]
          Length = 905

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
 Frame = +3

Query: 42  GAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGF--- 212
           GA  +LA++  R  DF   SI +I  +++FI+P  PE    K WF +   + PSM     
Sbjct: 453 GAFPVLAVKAGRVNDFNGKSIGTISTSKLFIEPDFPEALKTKAWFEREGKNMPSMSLSRE 512

Query: 213 VGATRFPPKTITLSEIHEER-RTTEEASFLVSAVVSNFDMQRPQWYTACVL------CKK 371
           V +        T+S+I +E+  T+E+  ++  +    F       YTAC L      C K
Sbjct: 513 VSSIGRTDVRKTISQIKDEKLGTSEKPDWITVSASVTFIKVDNFCYTACPLMIGDRQCNK 572

Query: 372 KY-NKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
           K  N  DG       K+ C  C  T D     Y LR ++QD
Sbjct: 573 KVTNNGDG-------KWRCDRCDQTVDECEYRYILRFQIQD 606


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223540930|gb|EEF42488.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 901

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGF------V 215
           +LA+++ R +DF   ++ +I  +++FI+P IPE   LK+WF +   + PS+        V
Sbjct: 483 VLAVKSGRVSDFNGKAVGTISTSQLFIEPDIPEARRLKEWFEKEGRNTPSVSISRELSSV 542

Query: 216 GATRFPPKTITLSEIHEERRTTEEASFLVSAVVSNFDMQRPQW-YTACVL------CKKK 374
           G +       T+S+I +E+  T E    ++   +   ++   + YTAC +      C KK
Sbjct: 543 GRSEIHK---TISQIKDEKLGTSEKPDWITINATVIYIKADNFCYTACPIMAGDRPCSKK 599

Query: 375 Y-NKPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
             N  DG       K+ C  C  + D     Y L+L+LQD
Sbjct: 600 VTNNGDG-------KWRCEKCDQSMDECDYRYILQLQLQD 632


>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 425

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGF---VGAT 224
           +LA+++ R +DF   ++ +I  +++FI+P  PE  SL++WF +   S  S+     V + 
Sbjct: 30  VLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASV 89

Query: 225 RFPPKTITLSEIHEER-RTTEEASFLVSAVVSNFDMQRPQWYTACVL------CKKKY-N 380
                  T+S+I +ER  T+E+  ++  +   +F       YTAC +      C KK  N
Sbjct: 90  GRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTN 149

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
             DG       K+ C  C  + D     Y L+L++QD
Sbjct: 150 NGDG-------KWRCDRCDQSVDECDYRYILQLQIQD 179


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 861

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGF---VGAT 224
           +LA+++ R +DF   ++ +I  +++FI+P  PE  SL++WF +   S  S+     V + 
Sbjct: 466 VLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASV 525

Query: 225 RFPPKTITLSEIHEER-RTTEEASFLVSAVVSNFDMQRPQWYTACVL------CKKKY-N 380
                  T+S+I +ER  T+E+  ++  +   +F       YTAC +      C KK  N
Sbjct: 526 GRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTN 585

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
             DG       K+ C  C  + D     Y L+L++QD
Sbjct: 586 NGDG-------KWRCDRCDQSVDECDYRYILQLQIQD 615


>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Solanum lycopersicum]
          Length = 899

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
 Frame = +3

Query: 54  MLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQWFSQLCHSRPSMGF---VGAT 224
           +LA++  R  DF   SI +I  +++FI+P  PE    K WF +   + PSM     V + 
Sbjct: 457 VLAVKAGRVNDFNGKSIGTISTSKLFIEPDFPEALKTKAWFEREGKNMPSMSLSREVSSV 516

Query: 225 RFPPKTITLSEIHEER-RTTEEASFLVSAVVSNFDMQRPQWYTACVL------CKKKY-N 380
                  T+S+I +E+  T+E+  ++  +    F       YTAC L      C KK  N
Sbjct: 517 GRTDVRKTISQIKDEKLGTSEKPDWITISATVTFIKVDNFCYTACPLMIGDRQCNKKVTN 576

Query: 381 KPDGPSKGEQQKYFCYACTNTSDTTTLCYNLRLKLQD 491
             DG       K+ C  C  T D     Y L+ ++QD
Sbjct: 577 NGDG-------KWRCDRCDQTVDECEYRYILQFQIQD 606