BLASTX nr result
ID: Ephedra26_contig00005773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00005773
(645 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25816.1| unknown [Picea sitchensis] 249 5e-64
ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloropl... 231 1e-58
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl... 231 1e-58
gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vu... 230 2e-58
gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus... 230 3e-58
ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloropl... 229 5e-58
ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloropl... 229 7e-58
ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group] g... 225 8e-57
ref|XP_004515536.1| PREDICTED: 30S ribosomal protein 2, chloropl... 224 1e-56
ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula] ... 224 2e-56
gb|AFK42365.1| unknown [Medicago truncatula] 223 5e-56
ref|XP_006660491.1| PREDICTED: 30S ribosomal protein 2, chloropl... 222 8e-56
gb|EOX96750.1| RNA-binding family protein [Theobroma cacao] 222 8e-56
ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Popu... 221 1e-55
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides] 221 1e-55
ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri... 220 2e-55
ref|XP_004956457.1| PREDICTED: 30S ribosomal protein 2, chloropl... 220 3e-55
ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloropl... 219 5e-55
ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloropl... 219 7e-55
gb|EMT04407.1| 30S ribosomal protein 2, chloroplastic [Aegilops ... 219 7e-55
>gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 249 bits (636), Expect = 5e-64
Identities = 126/180 (70%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
Frame = +1
Query: 67 KPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEE 246
K + R++YVGNIPR+ TNEELA +F E G V+KAEVMYDKYT++SRRF FVTMST E+
Sbjct: 67 KQKEIERRLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVED 126
Query: 247 AQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEE-PFIDSPHKVYVGNISRTVTTE 423
AQAA+EK+N TE+GGR IKVNI+EKPLD+SGL TEE FIDSP+KVYVGN+++ VTTE
Sbjct: 127 AQAAIEKMNGTEIGGRVIKVNITEKPLDVSGLNRLTEEAEFIDSPYKVYVGNLAKAVTTE 186
Query: 424 TLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVS 603
TLKK F+EKG++L AKV R ETGKS GYGFVSFSSEA+V+ AISAFNN LEGK +RV+
Sbjct: 187 TLKKKFAEKGNVLDAKVTRIPETGKSGGYGFVSFSSEADVEAAISAFNNVVLEGKPMRVN 246
Score = 57.4 bits (137), Expect = 4e-06
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +1
Query: 88 KVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVEK 267
KVYVGN+ ++VT E L F+E G V A+V T KS +GFV+ S+ + +AA+
Sbjct: 173 KVYVGNLAKAVTTETLKKKFAEKGNVLDAKVTRIPETGKSGGYGFVSFSSEADVEAAISA 232
Query: 268 LNETEMGGRTIKVNIS 315
N + G+ ++VN++
Sbjct: 233 FNNVVLEGKPMRVNVT 248
>ref|XP_006585341.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X2
[Glycine max]
Length = 302
Score = 231 bits (589), Expect = 1e-58
Identities = 121/188 (64%), Positives = 147/188 (78%), Gaps = 3/188 (1%)
Frame = +1
Query: 55 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMS 234
Q A E R++YVGNIPR+VTNEELA + E G V+KAEVMYDKY+ +SRRF FVTM
Sbjct: 116 QAATATEASARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMK 175
Query: 235 TAEEAQAAVEKLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNIS 405
T E+A A +EKLN TE+GGR +KVN++EKPL DL L+A+ E FIDSPHKVYVGN++
Sbjct: 176 TVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAE-ESEFIDSPHKVYVGNLA 234
Query: 406 RTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEG 585
+TVTT+TLK FSEKG +LSAKV R T KSSGYGFV+FSSE +V+ AIS+FNN LEG
Sbjct: 235 KTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLEG 294
Query: 586 KKIRVSKA 609
+ IRV+KA
Sbjct: 295 QTIRVNKA 302
>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic isoform X1
[Glycine max]
Length = 246
Score = 231 bits (589), Expect = 1e-58
Identities = 121/188 (64%), Positives = 147/188 (78%), Gaps = 3/188 (1%)
Frame = +1
Query: 55 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMS 234
Q A E R++YVGNIPR+VTNEELA + E G V+KAEVMYDKY+ +SRRF FVTM
Sbjct: 60 QAATATEASARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMK 119
Query: 235 TAEEAQAAVEKLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNIS 405
T E+A A +EKLN TE+GGR +KVN++EKPL DL L+A+ E FIDSPHKVYVGN++
Sbjct: 120 TVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAE-ESEFIDSPHKVYVGNLA 178
Query: 406 RTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEG 585
+TVTT+TLK FSEKG +LSAKV R T KSSGYGFV+FSSE +V+ AIS+FNN LEG
Sbjct: 179 KTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLEG 238
Query: 586 KKIRVSKA 609
+ IRV+KA
Sbjct: 239 QTIRVNKA 246
>gb|AHA84212.1| chloroplast 30S ribosomal protein 2 [Phaseolus vulgaris]
Length = 246
Score = 230 bits (587), Expect = 2e-58
Identities = 118/187 (63%), Positives = 147/187 (78%), Gaps = 2/187 (1%)
Frame = +1
Query: 55 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMS 234
Q A E R++YVGNIPR+V N+EL+ + E G ++KAEVMYDKY+ +SRRF FVTM
Sbjct: 60 QAATVTEAAARRLYVGNIPRTVNNDELSKIVQEHGAIEKAEVMYDKYSGRSRRFAFVTMK 119
Query: 235 TAEEAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLK-AQTEEP-FIDSPHKVYVGNISR 408
T E+A A +EKLN TE+GGR IKVN++EKPL S L +Q+EE FIDSPHKVYVGN+++
Sbjct: 120 TVEDANAVIEKLNGTEIGGREIKVNVTEKPLSTSDLPLSQSEESQFIDSPHKVYVGNLAK 179
Query: 409 TVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGK 588
TVTT+TLKK F EKG +LSAKV R T KSSGYGFV+FSSE +V+ AIS+FNN LEG+
Sbjct: 180 TVTTDTLKKFFFEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEDDVEAAISSFNNSSLEGQ 239
Query: 589 KIRVSKA 609
K+RV+KA
Sbjct: 240 KVRVNKA 246
>gb|ESW21069.1| hypothetical protein PHAVU_005G039000g [Phaseolus vulgaris]
Length = 241
Score = 230 bits (586), Expect = 3e-58
Identities = 116/177 (65%), Positives = 145/177 (81%), Gaps = 2/177 (1%)
Frame = +1
Query: 85 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVE 264
R++YVGNIPR+V N+EL+ + E G ++KAEVMYDKY+ +SRRF FVTM T E+A A +E
Sbjct: 65 RRLYVGNIPRTVNNDELSKIVQEHGAIEKAEVMYDKYSGRSRRFAFVTMKTVEDANAVIE 124
Query: 265 KLNETEMGGRTIKVNISEKPLDLSGLK-AQTEEP-FIDSPHKVYVGNISRTVTTETLKKA 438
KLN TE+GGR IKVN++EKPL S L +Q+EE FIDSPHKVYVGN+++TVTT+TLKK
Sbjct: 125 KLNGTEIGGREIKVNVTEKPLSTSDLPLSQSEESQFIDSPHKVYVGNLAKTVTTDTLKKF 184
Query: 439 FSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSKA 609
FSEKG +LSAKV R T KSSGYGFV+FSSE +V+ AIS+FNN LEG+K+RV+KA
Sbjct: 185 FSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEDDVEAAISSFNNSSLEGQKVRVNKA 241
>ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus] gi|449489082|ref|XP_004158209.1| PREDICTED: 30S
ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
Length = 251
Score = 229 bits (584), Expect = 5e-58
Identities = 122/188 (64%), Positives = 145/188 (77%), Gaps = 4/188 (2%)
Frame = +1
Query: 58 TAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMST 237
T + RK+Y+GNIPR+V NEEL + E G V+KAEVMYDKY+ +SRRF FVTM T
Sbjct: 65 TQGASSVAERKLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKT 124
Query: 238 AEEAQAAVEKLNETEMGGRTIKVNISEKP----LDLSGLKAQTEEPFIDSPHKVYVGNIS 405
E+A AA+EKLNETE+GGR IKVNI+EKP +D+S L+A+ E FIDSP+KVYVGNIS
Sbjct: 125 VEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAE-ESQFIDSPYKVYVGNIS 183
Query: 406 RTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEG 585
TV+TETLK FSEKG +LSAKV R T KSSGYGFV+FSSE EV AIS+FNN LEG
Sbjct: 184 STVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAISSFNNALLEG 243
Query: 586 KKIRVSKA 609
+ IRV+KA
Sbjct: 244 QPIRVNKA 251
>ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Glycine max]
Length = 246
Score = 229 bits (583), Expect = 7e-58
Identities = 120/188 (63%), Positives = 146/188 (77%), Gaps = 3/188 (1%)
Frame = +1
Query: 55 QTAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMS 234
Q A E R++YVGNIPR+VTN+ELA + E G V+KAEVMYDKY+ +SRRF FVTM
Sbjct: 60 QAATATEAAARRLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMK 119
Query: 235 TAEEAQAAVEKLNETEMGGRTIKVNISEKP---LDLSGLKAQTEEPFIDSPHKVYVGNIS 405
T E+A A +EKLN TE+GGR IKVN++EKP LDL L+A+ E FIDSPHKVYVGN++
Sbjct: 120 TVEDATAVIEKLNGTELGGREIKVNVTEKPLSTLDLPLLQAE-ESEFIDSPHKVYVGNLA 178
Query: 406 RTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEG 585
+TVTT+TLK FSEKG +LSAKV R T KSSGYGFV+F SE +V+ AIS+FNN LEG
Sbjct: 179 KTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAISSFNNSLLEG 238
Query: 586 KKIRVSKA 609
+ IRV+KA
Sbjct: 239 QTIRVNKA 246
>ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific
ribosomal protein 2 precursor [Oryza sativa Japonica
Group] gi|49388840|dbj|BAD26030.1| putative
plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group] gi|113630993|dbj|BAF24674.1|
Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein
OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 225 bits (574), Expect = 8e-57
Identities = 117/183 (63%), Positives = 143/183 (78%), Gaps = 1/183 (0%)
Frame = +1
Query: 64 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAE 243
A E+ RK+YVGNIPR+VTN+ELA +F++ GTV++AEVM+DKYT +SRRFGFVTMST E
Sbjct: 63 APEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPE 122
Query: 244 EAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEEP-FIDSPHKVYVGNISRTVTT 420
EA AA+E LNETE+GGR IKVN++E L A EP F+DS +KVYVGN++++VTT
Sbjct: 123 EANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTT 182
Query: 421 ETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRV 600
E LK FSEKG +LSA V R T KS GYGFV+FSSE EVQ A+S FNN ELEG+ IRV
Sbjct: 183 EMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQPIRV 242
Query: 601 SKA 609
+KA
Sbjct: 243 NKA 245
Score = 63.9 bits (154), Expect = 4e-08
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 355 EEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSE 534
E P + K+YVGNI RTVT + L F++ G++ A+V+ TG+S +GFV+ S+
Sbjct: 62 EAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTP 121
Query: 535 AEVQEAISAFNNQELEGKKIRVS 603
E AI + N E+ G+KI+V+
Sbjct: 122 EEANAAIESLNETEVGGRKIKVN 144
>ref|XP_004515536.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cicer
arietinum]
Length = 250
Score = 224 bits (572), Expect = 1e-56
Identities = 114/185 (61%), Positives = 145/185 (78%), Gaps = 1/185 (0%)
Frame = +1
Query: 58 TAAKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMST 237
T P+ RK+Y+GNIPR+VTN+ELA + E G+V+KAEVMYDKY+++SRRF FVTM T
Sbjct: 66 TVTSPKEADRKLYIGNIPRTVTNDELAQIVQEHGSVEKAEVMYDKYSKRSRRFAFVTMKT 125
Query: 238 AEEAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEE-PFIDSPHKVYVGNISRTV 414
E+A A VEKLN T++GGR IKVNI+EKPL L Q EE F+DSP+KVYVGN+++TV
Sbjct: 126 IEDANAVVEKLNGTQIGGREIKVNITEKPLTTVDLSLQAEESTFVDSPYKVYVGNLAKTV 185
Query: 415 TTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKI 594
T+++LK FSEKG L AKV R T KSSG+GFV+FSS+ +V+ AIS+FNN LEG+KI
Sbjct: 186 TSDSLKNLFSEKGKALGAKVSRVPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKI 245
Query: 595 RVSKA 609
RV+KA
Sbjct: 246 RVNKA 250
>ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein
[Medicago truncatula]
Length = 235
Score = 224 bits (571), Expect = 2e-56
Identities = 113/176 (64%), Positives = 142/176 (80%), Gaps = 1/176 (0%)
Frame = +1
Query: 85 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVE 264
RK+YVGNIPR+V+N+EL + E G V+KAEVMYDKY+++SRRF FVTM T E+A AA E
Sbjct: 60 RKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAE 119
Query: 265 KLNETEMGGRTIKVNISEKPLDLSGLKAQT-EEPFIDSPHKVYVGNISRTVTTETLKKAF 441
KLN TE+GGR IKVNI+EKPL GL Q E F+DSP+KVYVGN+++ VT+++LKK F
Sbjct: 120 KLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFF 179
Query: 442 SEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSKA 609
SEKG+ LSAKV R T KSSG+GFV+FSS+ +V+ AIS+FNN LEG+KIRV+KA
Sbjct: 180 SEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNKA 235
>gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 223 bits (567), Expect = 5e-56
Identities = 112/175 (64%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Frame = +1
Query: 85 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVE 264
RK+YVGNIPR+V+N+EL + E G V+KAEVMYDKY+++SRRF FVTM T E+A AA E
Sbjct: 60 RKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAE 119
Query: 265 KLNETEMGGRTIKVNISEKPLDLSGLKAQT-EEPFIDSPHKVYVGNISRTVTTETLKKAF 441
KLN TE+GGR IKVNI+EKPL GL Q E F+DSP+KVYVGN+++ VT+++LKK F
Sbjct: 120 KLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFF 179
Query: 442 SEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSK 606
SEKG+ LSAKV R T KSSG+GFV+FSS+ +V+ AIS+FNN LEG+KIRV+K
Sbjct: 180 SEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNK 234
>ref|XP_006660491.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Oryza
brachyantha]
Length = 243
Score = 222 bits (565), Expect = 8e-56
Identities = 115/183 (62%), Positives = 142/183 (77%), Gaps = 1/183 (0%)
Frame = +1
Query: 64 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAE 243
A E+ RK+YVGNIPR+VTN+ELA +F++ GTV +AEVMYDKYT +SRRFGFVTMST E
Sbjct: 61 APEEVAARKLYVGNIPRTVTNDELAAMFADHGTVDRAEVMYDKYTGRSRRFGFVTMSTPE 120
Query: 244 EAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEEP-FIDSPHKVYVGNISRTVTT 420
EA AA+E LNETE+GGR IKVN++E L A EP F+DS +KVYVGN++++VTT
Sbjct: 121 EANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTT 180
Query: 421 ETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRV 600
E LK FSEKG +LSA V R T KS GYGFV+FSS+ EV+ A+S FN+ ELEG+ IRV
Sbjct: 181 EMLKNFFSEKGQVLSATVSRIPGTSKSKGYGFVTFSSDEEVEAAVSTFNDAELEGQPIRV 240
Query: 601 SKA 609
+KA
Sbjct: 241 NKA 243
Score = 65.1 bits (157), Expect = 2e-08
Identities = 34/95 (35%), Positives = 56/95 (58%)
Frame = +1
Query: 319 KPLDLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVRRAETGK 498
+P ++ + E P + K+YVGNI RTVT + L F++ G++ A+V+ TG+
Sbjct: 48 RPAMVAASSSLLEAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVDRAEVMYDKYTGR 107
Query: 499 SSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVS 603
S +GFV+ S+ E AI + N E+ G+KI+V+
Sbjct: 108 SRRFGFVTMSTPEEANAAIESLNETEVGGRKIKVN 142
>gb|EOX96750.1| RNA-binding family protein [Theobroma cacao]
Length = 253
Score = 222 bits (565), Expect = 8e-56
Identities = 113/178 (63%), Positives = 143/178 (80%), Gaps = 3/178 (1%)
Frame = +1
Query: 85 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVE 264
R++Y+GNIPR+V N+EL + E G V+KAEVMYDKY+ +SRRF FVTM T E+A AA+E
Sbjct: 77 RRLYIGNIPRTVNNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIE 136
Query: 265 KLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 435
KLN TE+G R IKVNI+EKPL DLS L+ + + F+DSPHKVYVGN+++T+TT+TLKK
Sbjct: 137 KLNGTEIGQREIKVNITEKPLPQVDLSLLQDEDSQ-FVDSPHKVYVGNLAKTITTDTLKK 195
Query: 436 AFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSKA 609
FSEKG +LSAKV R T KS G+GFV+FSSE EV+ AISAFNN LEG+++RV+KA
Sbjct: 196 FFSEKGKVLSAKVSRVPGTSKSGGFGFVTFSSEEEVEAAISAFNNSLLEGQQVRVNKA 253
>ref|XP_002314019.1| hypothetical protein POPTR_0009s07030g [Populus trichocarpa]
gi|222850427|gb|EEE87974.1| hypothetical protein
POPTR_0009s07030g [Populus trichocarpa]
Length = 255
Score = 221 bits (564), Expect = 1e-55
Identities = 114/178 (64%), Positives = 144/178 (80%), Gaps = 3/178 (1%)
Frame = +1
Query: 85 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVE 264
R++YVGNIPR++TNEEL + E G V+KAEVMYDKY+ +SRRF FVTM TAE+A AA+E
Sbjct: 79 RRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIE 138
Query: 265 KLNETEMGGRTIKVNISEKP---LDLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 435
KLN TE+GGR IKVNI+EKP LDL L++ E F+DSP+KVYVGN+++TV T+TLK
Sbjct: 139 KLNGTEIGGREIKVNITEKPLQSLDLPSLQSD-ESQFVDSPYKVYVGNLAKTVATDTLKN 197
Query: 436 AFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSKA 609
FS+KG++LSAKV R T KSSG+GFV+FSSE +V+ AIS+FNN LEG+ IRV+KA
Sbjct: 198 FFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLEGQPIRVNKA 255
Score = 57.8 bits (138), Expect = 3e-06
Identities = 28/86 (32%), Positives = 49/86 (56%)
Frame = +1
Query: 346 AQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSF 525
A +P ++ ++YVGNI RT+T E L K E G++ A+V+ +G+S + FV+
Sbjct: 68 AAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTM 127
Query: 526 SSEAEVQEAISAFNNQELEGKKIRVS 603
+ + AI N E+ G++I+V+
Sbjct: 128 KTAEDANAAIEKLNGTEIGGREIKVN 153
>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 221 bits (563), Expect = 1e-55
Identities = 114/178 (64%), Positives = 144/178 (80%), Gaps = 3/178 (1%)
Frame = +1
Query: 85 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVE 264
R++YVGNIPR++TNEEL + E G V+KAEVMYDKY+ +SRRF FVTM TAE+A AA+E
Sbjct: 79 RRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIE 138
Query: 265 KLNETEMGGRTIKVNISEKP---LDLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 435
KLN TE+GGR IKVNI+EKP LDL L++ E F+DSP+KVYVGN+++TV T+TLK
Sbjct: 139 KLNGTEIGGREIKVNITEKPLQSLDLPSLQSD-ETQFVDSPYKVYVGNLAKTVATDTLKN 197
Query: 436 AFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSKA 609
FS+KG++LSAKV R T KSSG+GFV+FSSE +V+ AIS+FNN LEG+ IRV+KA
Sbjct: 198 FFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLEGQPIRVNKA 255
Score = 57.8 bits (138), Expect = 3e-06
Identities = 28/86 (32%), Positives = 49/86 (56%)
Frame = +1
Query: 346 AQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSF 525
A +P ++ ++YVGNI RT+T E L K E G++ A+V+ +G+S + FV+
Sbjct: 68 AAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTM 127
Query: 526 SSEAEVQEAISAFNNQELEGKKIRVS 603
+ + AI N E+ G++I+V+
Sbjct: 128 KTAEDANAAIEKLNGTEIGGREIKVN 153
>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547691|gb|EEF49184.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 256
Score = 220 bits (561), Expect = 2e-55
Identities = 113/178 (63%), Positives = 141/178 (79%), Gaps = 3/178 (1%)
Frame = +1
Query: 85 RKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAAVE 264
+++Y+GNIPR+V N+EL + E G V+KAEVMYDKY+ +SRRF FVTM T E+A A +E
Sbjct: 80 KRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDANAVIE 139
Query: 265 KLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKK 435
KLN T++GGR IKVNI+EKPL DLS L+ + E F+DSPHKVYVGN+++TVT+E LK
Sbjct: 140 KLNGTQIGGREIKVNITEKPLASGDLSFLQLE-ESQFVDSPHKVYVGNLAKTVTSEILKN 198
Query: 436 AFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSKA 609
FSEKG +LSAKV R T KSSGYGFVSFS E +V+ AIS+FNN LEG+KIRV+KA
Sbjct: 199 FFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAISSFNNSLLEGQKIRVNKA 256
>ref|XP_004956457.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like isoform X2
[Setaria italica]
Length = 244
Score = 220 bits (560), Expect = 3e-55
Identities = 114/183 (62%), Positives = 140/183 (76%), Gaps = 1/183 (0%)
Frame = +1
Query: 64 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAE 243
A E+ RK+YVGNIPR+VTN+EL +F+ GTV++AEVMYDKYT +SRRFGFVTMST E
Sbjct: 62 APAEVAARKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVE 121
Query: 244 EAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEEP-FIDSPHKVYVGNISRTVTT 420
EA AA+E LNETE+GGR IKVN++E L A EP F+DS +KVYVGN+++TVTT
Sbjct: 122 EANAAIEALNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKTVTT 181
Query: 421 ETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRV 600
E LK F+EKG ILSA V T KS GYGFV+FSSE EV+ A++ FNN ELEG+ IRV
Sbjct: 182 EVLKNFFAEKGQILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNNAELEGQPIRV 241
Query: 601 SKA 609
++A
Sbjct: 242 NRA 244
Score = 64.3 bits (155), Expect = 3e-08
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +1
Query: 325 LDLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVRRAETGKSS 504
L ++ A E P + K+YVGNI RTVT + L+ F+ G++ A+V+ T +S
Sbjct: 51 LRVAASSAVLEAPAEVAARKLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSR 110
Query: 505 GYGFVSFSSEAEVQEAISAFNNQELEGKKIRVS 603
+GFV+ S+ E AI A N E+ G+KI+V+
Sbjct: 111 RFGFVTMSTVEEANAAIEALNETEVGGRKIKVN 143
>ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 219 bits (558), Expect = 5e-55
Identities = 114/183 (62%), Positives = 141/183 (77%), Gaps = 1/183 (0%)
Frame = +1
Query: 64 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAE 243
A EL RK+YVGNIPR+VTN+EL +F++ GTV +A+VMYDKY+ +SRRFGFVTMS+ E
Sbjct: 62 APEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVE 121
Query: 244 EAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEEP-FIDSPHKVYVGNISRTVTT 420
EA AA+E LNETE+GGR IKVN++E L A EP F+DS +KVYVGN+++TVTT
Sbjct: 122 EANAAIESLNETEVGGRKIKVNVTESFLPNIDPSAPEPEPAFVDSQYKVYVGNLAKTVTT 181
Query: 421 ETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRV 600
E LK FSEKG +LSA V R T KS GYGFV+FSSE EV+ A+S FNN ELEG+ IRV
Sbjct: 182 EVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEGQPIRV 241
Query: 601 SKA 609
++A
Sbjct: 242 NRA 244
Score = 66.6 bits (161), Expect = 6e-09
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +1
Query: 346 AQTEEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSF 525
A E P + K+YVGNI RTVT + L+ F++ G++L A V+ +G+S +GFV+
Sbjct: 58 AVLEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTM 117
Query: 526 SSEAEVQEAISAFNNQELEGKKIRVS 603
SS E AI + N E+ G+KI+V+
Sbjct: 118 SSVEEANAAIESLNETEVGGRKIKVN 143
>ref|XP_006482842.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Citrus
sinensis]
Length = 258
Score = 219 bits (557), Expect = 7e-55
Identities = 111/180 (61%), Positives = 143/180 (79%), Gaps = 3/180 (1%)
Frame = +1
Query: 79 FRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAEEAQAA 258
F R+VY+GNIPR++ N+EL + E G V+KAEV+YDKYT +SRRF FV M T E+A A
Sbjct: 80 FARRVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAV 139
Query: 259 VEKLNETEMGGRTIKVNISEKPL---DLSGLKAQTEEPFIDSPHKVYVGNISRTVTTETL 429
+EKLN TE+GGR IKVNI+EKPL DLS L+A+ + F+DSP+KVYVGN+++TVT+E L
Sbjct: 140 IEKLNGTEIGGREIKVNITEKPLVQVDLSLLQAE-DSNFVDSPYKVYVGNLAKTVTSEML 198
Query: 430 KKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRVSKA 609
KK FSEKG +LSAKV+R T KSSG+GFV+FSSE + + AIS+ NN LEG++IRV+KA
Sbjct: 199 KKCFSEKGQVLSAKVLRVPGTSKSSGFGFVTFSSEEDAEAAISSLNNSLLEGQRIRVNKA 258
>gb|EMT04407.1| 30S ribosomal protein 2, chloroplastic [Aegilops tauschii]
Length = 185
Score = 219 bits (557), Expect = 7e-55
Identities = 114/183 (62%), Positives = 140/183 (76%), Gaps = 1/183 (0%)
Frame = +1
Query: 64 AKPELFRRKVYVGNIPRSVTNEELAGVFSEFGTVQKAEVMYDKYTQKSRRFGFVTMSTAE 243
A EL RK+YVGNIPR+VTN+EL+ +F+ GTV +AEVMYDKY+ +SRRFGFVTMSTAE
Sbjct: 3 APEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAE 62
Query: 244 EAQAAVEKLNETEMGGRTIKVNISEKPLDLSGLKAQTEEP-FIDSPHKVYVGNISRTVTT 420
E AA+E LN+TE+GGR IKVN++E L A EP F+DS +KVYVGN+++ VTT
Sbjct: 63 EVAAAIESLNDTEVGGRKIKVNVTESFLPNIDTSAPESEPSFVDSQYKVYVGNLAKKVTT 122
Query: 421 ETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSEAEVQEAISAFNNQELEGKKIRV 600
E LK FSEKG +LSA V R T KS GYGFV+FSSE EV+ A+S FNN ELEG+ IRV
Sbjct: 123 EVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEGQTIRV 182
Query: 601 SKA 609
++A
Sbjct: 183 NRA 185
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +1
Query: 355 EEPFIDSPHKVYVGNISRTVTTETLKKAFSEKGSILSAKVVRRAETGKSSGYGFVSFSSE 534
E P + K+YVGNI RTVT + L F+ G+++ A+V+ +G+S +GFV+ S+
Sbjct: 2 EAPEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTA 61
Query: 535 AEVQEAISAFNNQELEGKKIRVS 603
EV AI + N+ E+ G+KI+V+
Sbjct: 62 EEVAAAIESLNDTEVGGRKIKVN 84