BLASTX nr result
ID: Ephedra26_contig00005593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00005593
(933 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK24003.1| unknown [Picea sitchensis] 314 3e-83
gb|ABK23251.1| unknown [Picea sitchensis] 308 2e-81
gb|ABR17662.1| unknown [Picea sitchensis] 300 5e-79
gb|ABK21727.1| unknown [Picea sitchensis] gi|116793253|gb|ABK266... 281 3e-73
ref|XP_006285334.1| hypothetical protein CARUB_v10006724mg [Caps... 237 4e-60
ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278 [Arab... 234 5e-59
gb|AAS00039.1| splicing factor-like protein [Vitis riparia] 233 6e-59
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac... 233 8e-59
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera] 233 8e-59
ref|NP_194280.1| arginine/serine-rich splicing factor 35 [Arabid... 232 1e-58
ref|NP_001078447.1| arginine/serine-rich splicing factor 35 [Ara... 232 1e-58
dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana] 231 4e-58
gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana] 230 7e-58
emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana] 230 7e-58
gb|EXC15932.1| Arginine/serine-rich-splicing factor RSP40 [Morus... 228 3e-57
ref|XP_006340379.1| PREDICTED: arginine/serine-rich-splicing fac... 228 3e-57
gb|EMJ19230.1| hypothetical protein PRUPE_ppa005993mg [Prunus pe... 227 4e-57
ref|XP_004308115.1| PREDICTED: arginine/serine-rich-splicing fac... 227 6e-57
ref|XP_004251258.1| PREDICTED: arginine/serine-rich-splicing fac... 226 7e-57
ref|XP_004149584.1| PREDICTED: arginine/serine-rich-splicing fac... 226 7e-57
>gb|ABK24003.1| unknown [Picea sitchensis]
Length = 289
Score = 314 bits (804), Expect = 3e-83
Identities = 163/257 (63%), Positives = 186/257 (72%), Gaps = 5/257 (1%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
+GYAFVYMEDERDAE AI +LD+TEFGRQRRRL VEWTKH +RG RR+E G+RS LKP
Sbjct: 35 SGYAFVYMEDERDAEDAIRALDKTEFGRQRRRLTVEWTKHAERGLRRSEDGRRSVTGLKP 94
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
TKTLFVINFDP+ TR RD+ERHFEPYGK+LNVRIRRNFAF+ + TQ+EATKA D TH+S
Sbjct: 95 TKTLFVINFDPYDTRARDLERHFEPYGKVLNVRIRRNFAFIHYGTQEEATKAFDATHMST 154
Query: 404 ILDKVITVEYAQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYG 240
+LD+VITVEYAQ P YGRRA RGSPDYG
Sbjct: 155 LLDRVITVEYAQREDGNRRGGPSSPIRGGRYGRSSEDHGRDRSASPIYGRRAMRGSPDYG 214
Query: 239 RAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRAS 60
RAPSP YARR ER SPDY RA SP+YSRR E+ +Y RA SP Y RP+K+S DYGR +
Sbjct: 215 RAPSPTYARRPERCSPDYGRATSPIYSRRPEKHGSDYGRAASPVYASRPQKNSLDYGRDA 274
Query: 59 SPNNERERSLSRSPVRQ 9
SP ER+R SRSPVR+
Sbjct: 275 SPLLERDR--SRSPVRR 289
>gb|ABK23251.1| unknown [Picea sitchensis]
Length = 299
Score = 308 bits (789), Expect = 2e-81
Identities = 159/257 (61%), Positives = 184/257 (71%), Gaps = 5/257 (1%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
+GYAF+YMEDERDAE AI LD T+FGRQRRRL VEWTKH DRG RR E G+RS L P
Sbjct: 35 SGYAFIYMEDERDAEDAIRGLDNTDFGRQRRRLTVEWTKHADRGFRRFEDGRRSDAGLNP 94
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
TKTLFVINFDP+ST+VRD+ERHFEPYGKL+ VRIRRNFAFVQ+E+Q++ATKAL++TH+SK
Sbjct: 95 TKTLFVINFDPYSTKVRDLERHFEPYGKLIYVRIRRNFAFVQYESQEDATKALESTHMSK 154
Query: 404 ILDKVITVEYAQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYG 240
+LD+VITVEYAQ P YGRR RGSPDYG
Sbjct: 155 MLDRVITVEYAQGEDSDRRGGYSSPIQSRRYGKAADVRDRDRSASPRYGRRPVRGSPDYG 214
Query: 239 RAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRAS 60
RA SP+YAR ER S DY RAPSP+Y+R ER S +Y RA SP Y RPR+ DYGR +
Sbjct: 215 RARSPIYARSSERHSHDYGRAPSPIYARHPERHSHDYGRAASPVYVSRPRRDIPDYGRVA 274
Query: 59 SPNNERERSLSRSPVRQ 9
SP +ER R SRSPVR+
Sbjct: 275 SPVHERYR--SRSPVRR 289
>gb|ABR17662.1| unknown [Picea sitchensis]
Length = 337
Score = 300 bits (768), Expect = 5e-79
Identities = 152/242 (62%), Positives = 178/242 (73%), Gaps = 5/242 (2%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
+G+AF+YMEDE+DAE AI LD TEFG QRRRL VEWTK+ DRG RR+E G+RS LKP
Sbjct: 35 SGFAFIYMEDEQDAEDAIRGLDSTEFGTQRRRLSVEWTKNADRGVRRSEDGRRSVTDLKP 94
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
TKTLFVINFD ++T+V DIERHFEPYGKLLNVRIRRNFAFVQ+E Q++ATKAL++THLSK
Sbjct: 95 TKTLFVINFDSYNTKVEDIERHFEPYGKLLNVRIRRNFAFVQYELQEDATKALESTHLSK 154
Query: 404 ILDKVITVEYAQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYG 240
+LDKV+TV+YAQ P +GRRA RGSPDYG
Sbjct: 155 MLDKVLTVKYAQREDGDRRGRRSSPIRRGRYSRAGEDHDRDRSASPLHGRRAVRGSPDYG 214
Query: 239 RAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRAS 60
RA SP++ RR ERRSPDY RAPSP+Y+RR ER SP+Y RA SP Y +RP + S DYGRA
Sbjct: 215 RASSPIHGRRPERRSPDYGRAPSPIYARRPERRSPDYGRAPSPIYAKRPERRSPDYGRAP 274
Query: 59 SP 54
SP
Sbjct: 275 SP 276
Score = 122 bits (305), Expect = 3e-25
Identities = 58/91 (63%), Positives = 72/91 (79%)
Frame = -2
Query: 278 YGRRATRGSPDYGRAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEE 99
Y RR R SPDYGRAPSP+YA+R ERRSPDY RAPSP+Y++R ER SP+Y RA SP Y
Sbjct: 240 YARRPERRSPDYGRAPSPIYAKRPERRSPDYGRAPSPIYAKRPERRSPDYGRAASPVYAS 299
Query: 98 RPRKSSADYGRASSPNNERERSLSRSPVRQN 6
R +K+S DYGR +SP +E++R SRSP+RQ+
Sbjct: 300 RRQKNSPDYGRVASPVHEQDR--SRSPMRQS 328
>gb|ABK21727.1| unknown [Picea sitchensis] gi|116793253|gb|ABK26673.1| unknown
[Picea sitchensis]
Length = 271
Score = 281 bits (718), Expect = 3e-73
Identities = 147/253 (58%), Positives = 178/253 (70%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
+GYAF+YM+DERDAE AI LD EFGRQRRRLCVEWTKHP++G RR EGG+RS+ +KP
Sbjct: 35 SGYAFIYMDDERDAEDAIRGLDNREFGRQRRRLCVEWTKHPEKGFRRPEGGRRSTMYIKP 94
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
KTLFVINFDP T V+D+E+HFEPYGK+LNVRIRRNFAFVQFE+Q+EATKAL +T SK
Sbjct: 95 AKTLFVINFDPADTGVKDLEKHFEPYGKVLNVRIRRNFAFVQFESQEEATKALHSTDKSK 154
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
+LD +I+VEYAQ +YGR A R+ SP
Sbjct: 155 VLDSIISVEYAQRDDGDRRGGRSSPVRRG------------SYGRSAEGRD----RSESP 198
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSPNNE 45
+Y+RR R SPDY RAPSP+Y+RR+ERSSP+Y RA SP Y R ++ S DYGR SP +E
Sbjct: 199 IYSRRALRDSPDYGRAPSPIYARRSERSSPDYGRAASPIYARRLQRDSPDYGRVLSPVHE 258
Query: 44 RERSLSRSPVRQN 6
R R SRSPV ++
Sbjct: 259 RYR--SRSPVMRS 269
>ref|XP_006285334.1| hypothetical protein CARUB_v10006724mg [Capsella rubella]
gi|482554039|gb|EOA18232.1| hypothetical protein
CARUB_v10006724mg [Capsella rubella]
Length = 348
Score = 237 bits (605), Expect = 4e-60
Identities = 139/257 (54%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 585
G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK G RR+ GG +RSS ++P
Sbjct: 36 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKSERGGDRRSGGGSRRSSSGMRP 95
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFD +TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E Q++ATKALD T+ SK
Sbjct: 96 SKTLFVINFDADNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATKALDATNNSK 155
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++DKVI+VEYA Y R RGSPDYGR SP
Sbjct: 156 LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 212
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 57
V A R+ER SPDY R SP +++ R SPEY R DSP R R +S Y R S
Sbjct: 213 VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSP--RRRERVASPKYSR--S 268
Query: 56 PNNERER-SLSRSPVRQ 9
PNN+RER S + SP ++
Sbjct: 269 PNNKRERMSPNHSPFKK 285
>ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278 [Arabidopsis lyrata subsp.
lyrata] gi|297315506|gb|EFH45929.1| hypothetical protein
ARALYDRAFT_492278 [Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 234 bits (596), Expect = 5e-59
Identities = 137/257 (53%), Positives = 167/257 (64%), Gaps = 6/257 (2%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 585
G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK G RR+ GG +RSS ++P
Sbjct: 36 GFAFVYMEDERDAEDAIRALDRIEFGRKGRRLRVEWTKSEREGDRRSGGGSRRSSSGMRP 95
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFD +TR RD+ERHFEPYGK+LNVRIRRNFAF+Q+E Q++AT+ALD T+ SK
Sbjct: 96 SKTLFVINFDADNTRTRDLERHFEPYGKILNVRIRRNFAFIQYEAQEDATRALDATNNSK 155
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++DKVI+VEYA Y R RGSPDYGR SP
Sbjct: 156 LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 212
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 57
V A R++R SPDY R SP +++ SPEY R DSP R R +S Y R S
Sbjct: 213 VAAYRKDRTSPDYGRRRSPSPYKKSRCGSPEYGRDRRGNDSP--RRRERVASPKYSR--S 268
Query: 56 PNNERER-SLSRSPVRQ 9
PNN+RER S + SP ++
Sbjct: 269 PNNKRERMSPNHSPFKK 285
>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 233 bits (595), Expect = 6e-59
Identities = 132/273 (48%), Positives = 170/273 (62%), Gaps = 22/273 (8%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
TG+AF+YMEDERDAE AI LDRT FGR+ RRL VEWTK +RG RR G +RSS +L+P
Sbjct: 35 TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQ-ERGIRRPSGSRRSSTNLRP 93
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
KTLFVINFDP++TR RD+ERHF+PYGK+LN+RIRRNFAF+Q+E+Q++AT+AL+ T++SK
Sbjct: 94 AKTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSK 153
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYG-RRATRGSPDYGRAPS 228
++D+VI+VEYA + R RGSPDYGR S
Sbjct: 154 LMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSS 213
Query: 227 PVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSS----------- 81
P A R+ER SPDY R PSP RR +R+ P++ R+ SP++ R R S
Sbjct: 214 P-SAYRRERASPDYGRDPSP-SPRRRDRAMPDHGRSRSPSHHRRERTSHDSARGPSRSPY 271
Query: 80 ---------ADYGRASSPN-NERERSLSRSPVR 12
DYGR SP+ RE+ + P R
Sbjct: 272 RSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR 304
Score = 58.5 bits (140), Expect = 3e-06
Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 25/114 (21%)
Frame = -2
Query: 272 RRATRGSPDYGRAPSPVYARRQERRSPDYTRAP--SPLYSRRAERSSPEYRRADSPA--- 108
RR R PD+GR+ SP + RR ER S D R P SP S R++R+ P+Y R SP+
Sbjct: 235 RRRDRAMPDHGRSRSPSHHRR-ERTSHDSARGPSRSPYRSERSDRAIPDYGRGRSPSPGR 293
Query: 107 -------YEERP-------------RKSSADYGRASSPNNERERSLSRSPVRQN 6
Y +RP K+ DYGR +SP++ R + VR N
Sbjct: 294 REKIMPDYPDRPSLSPERKEKTGRSEKAIPDYGRGASPSSPRRERTNSDYVRAN 347
>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
vinifera]
Length = 480
Score = 233 bits (594), Expect = 8e-59
Identities = 132/273 (48%), Positives = 170/273 (62%), Gaps = 22/273 (8%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
TG+AF+YMEDERDAE AI LDRT FGR+ RRL VEWTK +RG RR G +RSS +L+P
Sbjct: 37 TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQ-ERGIRRPSGSRRSSTNLRP 95
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
KTLFVINFDP++TR RD+ERHF+PYGK+LN+RIRRNFAF+Q+E+Q++AT+AL+ T++SK
Sbjct: 96 AKTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSK 155
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYG-RRATRGSPDYGRAPS 228
++D+VI+VEYA + R RGSPDYGR S
Sbjct: 156 LMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSS 215
Query: 227 PVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSS----------- 81
P A R+ER SPDY R PSP RR +R+ P++ R+ SP++ R R S
Sbjct: 216 P-SAYRRERASPDYGRDPSP-SPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPY 273
Query: 80 ---------ADYGRASSPN-NERERSLSRSPVR 12
DYGR SP+ RE+ + P R
Sbjct: 274 RSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR 306
>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
Length = 479
Score = 233 bits (594), Expect = 8e-59
Identities = 132/273 (48%), Positives = 170/273 (62%), Gaps = 22/273 (8%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
TG+AF+YMEDERDAE AI LDRT FGR+ RRL VEWTK +RG RR G +RSS +L+P
Sbjct: 35 TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQ-ERGIRRPSGSRRSSTNLRP 93
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
KTLFVINFDP++TR RD+ERHF+PYGK+LN+RIRRNFAF+Q+E+Q++AT+AL+ T++SK
Sbjct: 94 AKTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSK 153
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYG-RRATRGSPDYGRAPS 228
++D+VI+VEYA + R RGSPDYGR S
Sbjct: 154 LMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSS 213
Query: 227 PVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSS----------- 81
P A R+ER SPDY R PSP RR +R+ P++ R+ SP++ R R S
Sbjct: 214 P-SAYRRERASPDYGRDPSP-SPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPY 271
Query: 80 ---------ADYGRASSPN-NERERSLSRSPVR 12
DYGR SP+ RE+ + P R
Sbjct: 272 RSERSDRAIPDYGRGRSPSPGRREKIMPDYPDR 304
>ref|NP_194280.1| arginine/serine-rich splicing factor 35 [Arabidopsis thaliana]
gi|334186916|ref|NP_001190837.1| arginine/serine-rich
splicing factor 35 [Arabidopsis thaliana]
gi|4033468|sp|P92965.2|RSP40_ARATH RecName:
Full=Arginine/serine-rich-splicing factor RSP40
gi|2582641|emb|CAA67800.1| splicing factor [Arabidopsis
thaliana] gi|2980800|emb|CAA18176.1| splicing factor
At-SRp40 [Arabidopsis thaliana]
gi|332659667|gb|AEE85067.1| arginine/serine-rich
splicing factor 35 [Arabidopsis thaliana]
gi|332659670|gb|AEE85070.1| arginine/serine-rich
splicing factor 35 [Arabidopsis thaliana]
Length = 350
Score = 232 bits (592), Expect = 1e-58
Identities = 136/257 (52%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 585
G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK G +R+ GG +RSS S++P
Sbjct: 36 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRP 95
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFD +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++ SK
Sbjct: 96 SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSK 155
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++DKVI+VEYA Y R RGSPDYGR SP
Sbjct: 156 LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 212
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 57
V A R+ER SPDY R SP +++ R SPEY R DSP ER S Y R S
Sbjct: 213 VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 269
Query: 56 PNNERER-SLSRSPVRQ 9
PNN+RER S + SP ++
Sbjct: 270 PNNKRERMSPNHSPFKK 286
>ref|NP_001078447.1| arginine/serine-rich splicing factor 35 [Arabidopsis thaliana]
gi|222423494|dbj|BAH19717.1| AT4G25500 [Arabidopsis
thaliana] gi|332659669|gb|AEE85069.1|
arginine/serine-rich splicing factor 35 [Arabidopsis
thaliana]
Length = 317
Score = 232 bits (592), Expect = 1e-58
Identities = 136/257 (52%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 585
G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK G +R+ GG +RSS S++P
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRP 62
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFD +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++ SK
Sbjct: 63 SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSK 122
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++DKVI+VEYA Y R RGSPDYGR SP
Sbjct: 123 LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 179
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 57
V A R+ER SPDY R SP +++ R SPEY R DSP ER S Y R S
Sbjct: 180 VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 236
Query: 56 PNNERER-SLSRSPVRQ 9
PNN+RER S + SP ++
Sbjct: 237 PNNKRERMSPNHSPFKK 253
>dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana]
Length = 317
Score = 231 bits (588), Expect = 4e-58
Identities = 135/257 (52%), Positives = 168/257 (65%), Gaps = 6/257 (2%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 585
G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK G +R+ GG +RSS S++P
Sbjct: 3 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRP 62
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFD +TR RD+E+HFEPYGK++NVRIRRNFAF+Q++ Q++AT+ALD ++ SK
Sbjct: 63 SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYKAQEDATRALDASNNSK 122
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++DKVI+VEYA Y R RGSPDYGR SP
Sbjct: 123 LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 179
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 57
V A R+ER SPDY R SP +++ R SPEY R DSP ER S Y R S
Sbjct: 180 VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 236
Query: 56 PNNERER-SLSRSPVRQ 9
PNN+RER S + SP ++
Sbjct: 237 PNNKRERMSPNHSPFKK 253
>gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 350
Score = 230 bits (586), Expect = 7e-58
Identities = 135/257 (52%), Positives = 167/257 (64%), Gaps = 6/257 (2%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 585
G+AFVYMEDERDAE AI +LDR EFGR+ R L VEWTK G +R+ GG +RSS S++P
Sbjct: 36 GFAFVYMEDERDAEDAIRALDRFEFGRRGRTLRVEWTKSERGGDKRSGGGSRRSSSSMRP 95
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFD +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++ SK
Sbjct: 96 SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSK 155
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++DKVI+VEYA Y R RGSPDYGR SP
Sbjct: 156 LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPTPYKRE--RGSPDYGRGASP 212
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 57
V A R+ER SPDY R SP +++ R SPEY R DSP ER S Y R S
Sbjct: 213 VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 269
Query: 56 PNNERER-SLSRSPVRQ 9
PNN+RER S + SP ++
Sbjct: 270 PNNKRERMSPNHSPFKK 286
>emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 349
Score = 230 bits (586), Expect = 7e-58
Identities = 135/257 (52%), Positives = 167/257 (64%), Gaps = 6/257 (2%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG-KRSSGSLKP 585
G+AFVYMEDERDAE AI +LDR EFGR+ RRL VEWTK G +R+ GG +RSS S++P
Sbjct: 35 GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKGERGGDKRSGGGSRRSSSSMRP 94
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFD +TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E Q++AT+ALD ++ K
Sbjct: 95 SKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNRK 154
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++DKVI+VEYA Y R RGSPDYGR SP
Sbjct: 155 LMDKVISVEYA-VKDDDARGNGHSPERRRDRSPERRRRSPSPYKRE--RGSPDYGRGASP 211
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEY----RRADSPAYEERPRKSSADYGRASS 57
V A R+ER SPDY R SP +++ R SPEY R DSP ER S Y R S
Sbjct: 212 VAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERV-ASPTKYSR--S 268
Query: 56 PNNERER-SLSRSPVRQ 9
PNN+RER S + SP ++
Sbjct: 269 PNNKRERMSPNHSPFKK 285
>gb|EXC15932.1| Arginine/serine-rich-splicing factor RSP40 [Morus notabilis]
Length = 614
Score = 228 bits (580), Expect = 3e-57
Identities = 125/246 (50%), Positives = 164/246 (66%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
+G+AF+YMED+RDAE AI +LDR EFGR+ RRL VEWTK +RG RR G K+SS + +P
Sbjct: 211 SGFAFIYMEDDRDAEDAIRALDRREFGRKGRRLRVEWTKQ-ERGIRRPGGSKKSSANNRP 269
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFDP+ TR +D+ERHF+ YGK+++VRIRRNFAFVQ+E+Q++ATKAL+ T++SK
Sbjct: 270 SKTLFVINFDPYHTRTKDLERHFDQYGKIVSVRIRRNFAFVQYESQEDATKALEATNMSK 329
Query: 404 ILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
++D+VI+VEYA R RGSPDYGR SP
Sbjct: 330 LMDRVISVEYAVRDDDERKDGYSPDRSRDRSLERGRDRRRSPSPYRRERGSPDYGRGSSP 389
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSPNNE 45
A R+ER SPDY R SP ++ ER+SP+Y R SP+ R R + AD+GR SS +
Sbjct: 390 -GAYRRERGSPDYGRGRSPSPYKK-ERASPDYGRGRSPSPYRRER-AGADHGRGSSRSPN 446
Query: 44 RERSLS 27
R +S
Sbjct: 447 RREKVS 452
>ref|XP_006340379.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like isoform
X1 [Solanum tuberosum]
Length = 361
Score = 228 bits (580), Expect = 3e-57
Identities = 134/267 (50%), Positives = 170/267 (63%), Gaps = 6/267 (2%)
Frame = -2
Query: 803 NLYLFIIFTYGIFTGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRR 624
+ YL ++G +G+AFVYM+DERDAE AI LDR EFGR+ RRL +EW+K +R RR
Sbjct: 31 SFYLIYGVSWGWVSGFAFVYMDDERDAEDAIRGLDRIEFGRKGRRLRIEWSKE-ERNGRR 89
Query: 623 AEGGKRSSGSLKPTKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQD 444
E ++SS S+KP+KTLFVINFDP+STR RDIERHF+PYGK+LN+RIRRNFAFVQ+ETQ+
Sbjct: 90 PETSRKSSSSVKPSKTLFVINFDPYSTRSRDIERHFDPYGKILNIRIRRNFAFVQYETQE 149
Query: 443 EATKALDNTHLSKILDKVITVEYA--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGR 270
+AT+ALD T++SK++D+VITVEYA YGR
Sbjct: 150 DATRALDATNMSKLMDQVITVEYANKDDDDRRNGFSPDRNRDRGLKRGYDRGRSRSPYGR 209
Query: 269 RATRGSPDYG----RAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYE 102
RGSPDYG R+PSP+ RQ R SPDY R SP + R ER S EY SP
Sbjct: 210 E--RGSPDYGRGRARSPSPI---RQGRSSPDYGRRSSPNPNHR-ERDS-EYGSGRSP--- 259
Query: 101 ERPRKSSADYGRASSPNNERERSLSRS 21
++ + D+G SPN R R+ S +
Sbjct: 260 NMRKERNPDHGNGHSPNPRRLRAGSEN 286
>gb|EMJ19230.1| hypothetical protein PRUPE_ppa005993mg [Prunus persica]
Length = 433
Score = 227 bits (579), Expect = 4e-57
Identities = 126/246 (51%), Positives = 164/246 (66%), Gaps = 3/246 (1%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTK--HPDRGSRRAEGGKRSSGSL 591
+G+AF+YMEDERDAE AI LDR EFGR+ RRL VEWTK + +RG+RR +RSS +
Sbjct: 106 SGFAFIYMEDERDAEYAIRGLDRKEFGRKGRRLRVEWTKVANHERGTRRPGASRRSSTNT 165
Query: 590 KPTKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHL 411
+P+KTLFVINFDP+ TR +D+ERHF+PYGK+++VRIRRNFAFVQ+E+Q++AT+AL+ T++
Sbjct: 166 RPSKTLFVINFDPYHTRTKDLERHFDPYGKIVSVRIRRNFAFVQYESQEDATRALEATNM 225
Query: 410 SKILDKVITVEYA-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRA 234
SK++D+VI+VEYA + + RGSPDYGR
Sbjct: 226 SKLMDRVISVEYAVRDDDERRDGFSPDRRSRDRSLDRGRDRRRSPSPYKRERGSPDYGRG 285
Query: 233 PSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSP 54
PSP RR ER SPDY R PSP R ER SP+Y R SP+ R R +D+GR SS
Sbjct: 286 PSPGPYRR-ERGSPDYGRGPSPY---RRERVSPDYGRGRSPSPYRRER---SDHGRVSSR 338
Query: 53 NNERER 36
+ +ER
Sbjct: 339 SPRKER 344
>ref|XP_004308115.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like
[Fragaria vesca subsp. vesca]
Length = 376
Score = 227 bits (578), Expect = 6e-57
Identities = 129/260 (49%), Positives = 167/260 (64%), Gaps = 12/260 (4%)
Frame = -2
Query: 761 GYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKPT 582
G+AF+YM+DERDA+ AI LDR EFGR+ RRL VEW+KH +RGSRR +RSS +P+
Sbjct: 36 GFAFIYMDDERDADYAIRGLDRREFGRKGRRLRVEWSKH-ERGSRRPGASRRSSTITRPS 94
Query: 581 KTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSKI 402
KTLFVINFDP+ TR +D+ERHF+PYGK+++VRIRRNFAFVQ+E+Q++AT+AL+ T++SK+
Sbjct: 95 KTLFVINFDPYHTRTKDLERHFDPYGKIISVRIRRNFAFVQYESQEDATRALEATNMSKL 154
Query: 401 LDKVITVEYA-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYGRAPSP 225
+D+VI+VEYA + + RGSPDYGR PSP
Sbjct: 155 MDRVISVEYAVRDDDERRDGYSPDRRSRERSLERGRDRRRSPSPYKRERGSPDYGRGPSP 214
Query: 224 VYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRASSPN-- 51
RR ER SPDY R SP R ER+SP+Y R SP+ R R +D+GR SS +
Sbjct: 215 GPYRR-ERGSPDYGRGTSPY---RRERASPDYARGHSPSPYRRER---SDHGRVSSRSPR 267
Query: 50 ---------NERERSLSRSP 18
+R RS SRSP
Sbjct: 268 KERVSADHGRDRSRSRSRSP 287
>ref|XP_004251258.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Solanum
lycopersicum]
Length = 354
Score = 226 bits (577), Expect = 7e-57
Identities = 132/254 (51%), Positives = 165/254 (64%), Gaps = 6/254 (2%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGGKRSSGSLKP 585
+G+AFVYM+DERDAE AI LDR EFGR+ RRL +EW+K +R RR E ++SS S+KP
Sbjct: 35 SGFAFVYMDDERDAEDAIRGLDRIEFGRKGRRLRIEWSKE-ERNGRRPETSRKSSSSVKP 93
Query: 584 TKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKALDNTHLSK 405
+KTLFVINFDP+STR RDIERHF+PYGK+LN+RIRRNFAFVQ+ETQ++AT+ALD T++SK
Sbjct: 94 SKTLFVINFDPYSTRSRDIERHFDPYGKILNIRIRRNFAFVQYETQEDATRALDATNMSK 153
Query: 404 ILDKVITVEYA--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSPDYG--- 240
++D+VITVEYA YGR RGSPDYG
Sbjct: 154 LMDQVITVEYANKDDDDRRNGFSPDRNRDRGLKRGYDRGRSRSPYGRE--RGSPDYGRGR 211
Query: 239 -RAPSPVYARRQERRSPDYTRAPSPLYSRRAERSSPEYRRADSPAYEERPRKSSADYGRA 63
R+PSP+ RQ R SPDY R PSP + R ER S EY SP ++ + D+G
Sbjct: 212 ARSPSPI---RQGRSSPDYGRRPSPNPNHR-ERDS-EYGSGRSP---NMRKERNPDHGNG 263
Query: 62 SSPNNERERSLSRS 21
SPN R R+ S +
Sbjct: 264 HSPNPRRLRAGSEN 277
>ref|XP_004149584.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Cucumis
sativus] gi|449528505|ref|XP_004171244.1| PREDICTED:
arginine/serine-rich-splicing factor RSP40-like [Cucumis
sativus]
Length = 367
Score = 226 bits (577), Expect = 7e-57
Identities = 136/273 (49%), Positives = 173/273 (63%), Gaps = 21/273 (7%)
Frame = -2
Query: 764 TGYAFVYMEDERDAESAIHSLDRTEFGRQRRRLCVEWTKHPDRGSRRAEGG--------K 609
+G+AF+YMEDER+AE AIH+LDR EFGR+ RRL VEWTK +RG RR GG +
Sbjct: 35 SGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQ-ERGIRRPSGGGGGSGGGSR 93
Query: 608 RSSGSLKPTKTLFVINFDPFSTRVRDIERHFEPYGKLLNVRIRRNFAFVQFETQDEATKA 429
RSS + +P+KTLFVINFDP+ TR+RD+ERHF+PYGK+LNVRIRRNFAFVQ+E Q++AT+A
Sbjct: 94 RSSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRA 153
Query: 428 LDNTHLSKILDKVITVEYAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAYGRRATRGSP 249
L+ T++SK++D+VI+VEYA P R RGSP
Sbjct: 154 LEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSP---YRRERGSP 210
Query: 248 DYGRAPSPVYARRQERRSPDY--TRAPSPLYSRRAERSSPEYRRADSPAYE--ERPRKSS 81
DYG S RRQ R SPDY R+PSP Y R ER SP+Y R SP + R R+ S
Sbjct: 211 DYGNGISRSPYRRQ-RASPDYGSRRSPSP-YQRERERGSPDYSRGRSPKHSPYRRERERS 268
Query: 80 ADYGRASS---------PNNERERSLSRSPVRQ 9
+D+ RA S PN++R + S SP R+
Sbjct: 269 SDHIRAPSHSPPHQRERPNDDRIPNRSPSPYRR 301