BLASTX nr result

ID: Ephedra26_contig00005527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00005527
         (989 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76873.1| unknown [Picea sitchensis]                              77   1e-11

>gb|ADE76873.1| unknown [Picea sitchensis]
          Length = 371

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 21/208 (10%)
 Frame = +3

Query: 3   KSPSEPLMLRLSKELGLSERQIKRWFRYQREKEK--KKEDVDSNEEQGVGQGYN------ 158
           K P+E +  +LS+ELGLSE+Q++RWFR++R K+K  KKED DSNEE   G G N      
Sbjct: 39  KYPTESMKGKLSRELGLSEKQVQRWFRHRRLKDKKGKKEDPDSNEELDAGSGSNLQQQQH 98

Query: 159 -------QYGKPGLPALQDHPSPTFAPEPSVRKSAKEGNFCNLQKNGVNGSTSNSSFNVS 317
                  +  K  L  + D+PS   A E +     K  N   ++++  +    ++S + S
Sbjct: 99  VVRTELGRSEKRRLLGISDYPSAVLAAELTDHDMLKR-NHRVMEEDPHHAGNVSTSQDTS 157

Query: 318 NQRIKSFPESYNFSNEKYADVKEAQSWKRTREFSGTDMGNTFPR------KELKLEGPRQ 479
           + + +S  E     N  Y ++K + S KR  +     M +T+P+      +E  +    +
Sbjct: 158 SLQSRSSYEMDALRNGNYVEMKGSNSKKRKGQVMHMGMEHTYPQHFSVATEEQYIARGLK 217

Query: 480 QSNGRDLNSKEPRSIKRNSEFTDMDLEN 563
           Q+ G   NSK+ ++  R    T  D EN
Sbjct: 218 QAGGS--NSKQAKNWNR---LTAKDGEN 240


Top