BLASTX nr result
ID: Ephedra26_contig00005413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00005413
(892 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT19052.1| Splicing factor U2AF 50 kDa subunit [Aegilops tau... 64 6e-08
gb|EMS68073.1| Splicing factor U2AF 50 kDa subunit [Triticum ura... 64 1e-07
ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840... 64 1e-07
ref|XP_004160593.1| PREDICTED: uncharacterized LOC101213128 [Cuc... 61 5e-07
ref|XP_004147181.1| PREDICTED: uncharacterized protein LOC101213... 61 5e-07
gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japo... 61 5e-07
ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group] g... 61 5e-07
gb|ABF93875.1| RNA recognition motif family protein, expressed [... 61 5e-07
gb|ABF93874.1| RNA recognition motif family protein, expressed [... 61 5e-07
ref|XP_006649367.1| PREDICTED: splicing factor U2af large subuni... 59 2e-06
gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays] 58 4e-06
gb|AFW89624.1| hypothetical protein ZEAMMB73_282398 [Zea mays] 58 4e-06
ref|NP_001170011.1| uncharacterized protein LOC100383918 [Zea ma... 58 4e-06
gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indi... 58 5e-06
ref|NP_850210.2| RNA recognition motif-containing protein [Arabi... 57 7e-06
>gb|EMT19052.1| Splicing factor U2AF 50 kDa subunit [Aegilops tauschii]
Length = 1232
Score = 64.3 bits (155), Expect = 6e-08
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Frame = +3
Query: 150 SGISDCASHEKQEQTDREQPVQHGSNSKEPRDPPLSESLAATAIHEIQSVTSDTVDNKTS 329
+ + D + D+E H +++ +D TA+ +IQ+ +D +T
Sbjct: 1058 TAVGDIHAKAAGPTVDQEMEADHMDSTQADQD--------GTAVDDIQARAADMDSTQTD 1109
Query: 330 LNMGISNKE--GE-HTGPVD---------GEKLTNGEADKNSPN----SEEGKS------ 443
+ ++ GE H GP G+ + E +K + SE G+
Sbjct: 1110 QDASAVGEDSLGEGHAGPTTLEACGSTTPGDVVETSETEKEQQSADDVSESGEEKQPVAV 1169
Query: 444 ------TPTSDQ--LEVASIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRW 599
P SD LE SI VEF+R+E AC+AAH+LHGR +G + VS Y Y +
Sbjct: 1170 ADTRDVAPVSDTIVLEAGSILVEFMRKEAACMAAHSLHGRSFGDRTVSAGYAPHDLYLQR 1229
Query: 600 FPR 608
+PR
Sbjct: 1230 YPR 1232
>gb|EMS68073.1| Splicing factor U2AF 50 kDa subunit [Triticum urartu]
Length = 1253
Score = 63.5 bits (153), Expect = 1e-07
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Frame = +3
Query: 186 EQTDREQPVQHGSNSKEPRDPPLSESLAATAIHEIQSVTSDTVDNKTSLNMGISNKE--G 359
+ D+E H +++ +D TA+ IQ +D +T + ++ G
Sbjct: 1099 DTVDQEMEADHMDSTQADQD--------GTAVDYIQGRAADMDSTQTDQDASPVGEDSLG 1150
Query: 360 E-HTGPV-----------------DGEKLTNGEADKNSPNSEEGKSTPTSDQ--LEVASI 479
E H GP + EK D + +E+ P SD LE SI
Sbjct: 1151 EGHAGPTTLEACGSTTPVGVVEKSETEKEQQSADDVSESGAEKLPVAPVSDTIVLEAGSI 1210
Query: 480 FVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEF+R+E AC+AAH+LHGR +G + VS Y Y + +PR
Sbjct: 1211 LVEFMRKEAACMAAHSLHGRSFGDRTVSAGYAPHALYLQRYPR 1253
>ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840355 [Brachypodium
distachyon]
Length = 840
Score = 63.5 bits (153), Expect = 1e-07
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Frame = +3
Query: 84 DVTHTIADSSENGARDGLISCCSGISDCASHEKQEQTDREQPVQHGSNSKEPRDPPLSES 263
DV H ++S E+ D L C + D+ + H + DP L +
Sbjct: 653 DVDHPSSESQEHKELDTLCEC----------DVPAAVDQYTDLDHIHATAA--DPALDQH 700
Query: 264 LAATAIHEIQSVTSD---------TVDNKTS--------LNMGISNKEGEHTGPVDGEKL 392
+ A + Q+V D TVD+ ++ L + S G+ + E
Sbjct: 701 MEADHMDSKQAVHMDSTQADHHATTVDDDSAVGHAGPRTLEICSSTTPGDVVDTSERENQ 760
Query: 393 TNGEADKNSPNSEEGKSTPTSDQ--------LEVASIFVEFLREETACLAAHNLHGREYG 548
G D + +E+ T D LE SI VEF+R+E AC+AAH+LHGR +G
Sbjct: 761 QQGTNDVSESGAEQLPEAGTRDDALVSGTIMLEAGSILVEFMRKEAACMAAHSLHGRSFG 820
Query: 549 SKKVSVSYFSETSYQRWFPR 608
+ +S Y Y + +PR
Sbjct: 821 DRSLSAGYAPHDLYLQMYPR 840
>ref|XP_004160593.1| PREDICTED: uncharacterized LOC101213128 [Cucumis sativus]
Length = 918
Score = 61.2 bits (147), Expect = 5e-07
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Frame = +3
Query: 3 QVNSSTQIVIEDSKLQQNSAMQINKDDDVTHTIADSSENGA-RDGLIS---CCSGISDCA 170
Q NS+T I + L+ N+A N D A+ +NG +D + C G +D
Sbjct: 717 QENSTTVISRNSNDLEDNNANLDNCPSDSNQKQANCPDNGRHQDEAVEDKLCQMGNTDAT 776
Query: 171 SHEKQEQTDREQPVQHGSNSKEPRDPPLSESLAATAIHEIQS-VTSDTVDNKTSLNMGIS 347
E + + + H + E R P ++ A I++ + V + S +M
Sbjct: 777 CFEVADCENASERTGHVLS--EQRSSPENDFQDAKVTEIIETGLDKKLVCVEASSSMMAD 834
Query: 348 NKEGEHTGPVDGEKLTNGEADKNSPNSEEGKSTPTSDQ---LEVASIFVEFLREETACLA 518
N++ G ++ + +K+ K P ++Q + S+FVEF R E +C+A
Sbjct: 835 NEKKSLNGLDPVVRIASNAVEKSE------KKDPDNNQESLFVLGSVFVEFGRIEASCMA 888
Query: 519 AHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
AH+LHGR Y +++S+ Y Y++ FP+
Sbjct: 889 AHSLHGRIYDGQEISIEYIPHGLYRKRFPK 918
>ref|XP_004147181.1| PREDICTED: uncharacterized protein LOC101213128 [Cucumis sativus]
Length = 910
Score = 61.2 bits (147), Expect = 5e-07
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Frame = +3
Query: 3 QVNSSTQIVIEDSKLQQNSAMQINKDDDVTHTIADSSENGA-RDGLIS---CCSGISDCA 170
Q NS+T I + L+ N+A N D A+ +NG +D + C G +D
Sbjct: 709 QENSTTVISRNSNDLEDNNANLDNCPSDSNQKQANCPDNGRHQDEAVEDKLCQMGNTDAT 768
Query: 171 SHEKQEQTDREQPVQHGSNSKEPRDPPLSESLAATAIHEIQS-VTSDTVDNKTSLNMGIS 347
E + + + H + E R P ++ A I++ + V + S +M
Sbjct: 769 CFEVADCENASERTGHVLS--EQRSSPENDFQDAKVTEIIETGLDKKLVCVEASSSMMAD 826
Query: 348 NKEGEHTGPVDGEKLTNGEADKNSPNSEEGKSTPTSDQ---LEVASIFVEFLREETACLA 518
N++ G ++ + +K+ K P ++Q + S+FVEF R E +C+A
Sbjct: 827 NEKKSLNGLDPVVRIASNAVEKSE------KKDPDNNQESLFVLGSVFVEFGRIEASCMA 880
Query: 519 AHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
AH+LHGR Y +++S+ Y Y++ FP+
Sbjct: 881 AHSLHGRIYDGQEISIEYIPHGLYRKRFPK 910
>gb|EAZ25510.1| hypothetical protein OsJ_09334 [Oryza sativa Japonica Group]
Length = 942
Score = 61.2 bits (147), Expect = 5e-07
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEEGKSTPTSDQ--------LEVASIF 482
SL S G+ E G A + N+E+ + D LE I
Sbjct: 841 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 900
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 901 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 942
>ref|NP_001048907.1| Os03g0138100 [Oryza sativa Japonica Group]
gi|113547378|dbj|BAF10821.1| Os03g0138100 [Oryza sativa
Japonica Group]
Length = 404
Score = 61.2 bits (147), Expect = 5e-07
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEEGKSTPTSDQ--------LEVASIF 482
SL S G+ E G A + N+E+ + D LE I
Sbjct: 303 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 362
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 363 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 404
>gb|ABF93875.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 61.2 bits (147), Expect = 5e-07
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEEGKSTPTSDQ--------LEVASIF 482
SL S G+ E G A + N+E+ + D LE I
Sbjct: 863 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 922
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 923 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964
>gb|ABF93874.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 964
Score = 61.2 bits (147), Expect = 5e-07
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Frame = +3
Query: 327 SLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEEGKSTPTSDQ--------LEVASIF 482
SL S G+ E G A + N+E+ + D LE I
Sbjct: 863 SLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAGCIL 922
Query: 483 VEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
VEFLR+E AC+AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 923 VEFLRKEAACIAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 964
>ref|XP_006649367.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Oryza brachyantha] gi|573923585|ref|XP_006649368.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X2 [Oryza brachyantha]
gi|573923587|ref|XP_006649369.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X3 [Oryza
brachyantha]
Length = 957
Score = 59.3 bits (142), Expect = 2e-06
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 7/178 (3%)
Frame = +3
Query: 96 TIADSSENGARDGLISC---CSGISDCASHEKQEQTDR----EQPVQHGSNSKEPRDPPL 254
+I +++ D L C +G + + +QTD + V G+ K DP +
Sbjct: 797 SIPKGADHNELDRLRKCDAPTAGDENTDQSAEADQTDTIDADVRAVDDGTLEKGHADPLI 856
Query: 255 SESLAATAIHEIQSVTSDTVDNKTSLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEE 434
E ++ + +N+ G+S E VD + +
Sbjct: 857 PEICCSSPPGD--GADKPGRENEQQCGTGVSESNTEKAPAVD---------------ARD 899
Query: 435 GKSTPTSDQLEVASIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
S ++ LE I VEFLR+E AC AAH+LHGR +GS+ VS Y Y + +PR
Sbjct: 900 SASASSTSALEAGCILVEFLRKEAACTAAHSLHGRRFGSRIVSAGYAPHDLYLQKYPR 957
>gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 635
Score = 58.2 bits (139), Expect = 4e-06
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 399 GEADKNSPNSEEGKSTPTSDQ---LEVASIFVEFLREETACLAAHNLHGREYGSKKVSVS 569
G+ ++ P +E ++ TSD E S+ VEFLREE AC+AAH+LHGR +G++ V
Sbjct: 564 GDVTEDRPE-KEAQAVGTSDTGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAG 622
Query: 570 YFSETSYQRWFPR 608
Y Y + +PR
Sbjct: 623 YAPYDLYLQKYPR 635
>gb|AFW89624.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
Length = 378
Score = 58.2 bits (139), Expect = 4e-06
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 399 GEADKNSPNSEEGKSTPTSDQ---LEVASIFVEFLREETACLAAHNLHGREYGSKKVSVS 569
G+ ++ P +E ++ TSD E S+ VEFLREE AC+AAH+LHGR +G++ V
Sbjct: 307 GDVTEDRPE-KEAQAVGTSDTGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAG 365
Query: 570 YFSETSYQRWFPR 608
Y Y + +PR
Sbjct: 366 YAPYDLYLQKYPR 378
>ref|NP_001170011.1| uncharacterized protein LOC100383918 [Zea mays]
gi|224032879|gb|ACN35515.1| unknown [Zea mays]
Length = 331
Score = 58.2 bits (139), Expect = 4e-06
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 399 GEADKNSPNSEEGKSTPTSDQ---LEVASIFVEFLREETACLAAHNLHGREYGSKKVSVS 569
G+ ++ P +E ++ TSD E S+ VEFLREE AC+AAH+LHGR +G++ V
Sbjct: 260 GDVTEDRPE-KEAQAVGTSDTGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAG 318
Query: 570 YFSETSYQRWFPR 608
Y Y + +PR
Sbjct: 319 YAPYDLYLQKYPR 331
>gb|EEC74478.1| hypothetical protein OsI_09930 [Oryza sativa Indica Group]
Length = 1128
Score = 57.8 bits (138), Expect = 5e-06
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Frame = +3
Query: 318 NKTSLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNSEEGKSTPTSDQ--------LEVA 473
++ SL S G+ E G A + N+E+ + D LE
Sbjct: 1024 DQASLETSCSTAPGDGADKSGRENEQQGGAGVSESNTEKAPAVDARDNALASNTSALEAG 1083
Query: 474 SIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFPR 608
I VEFLR+E AC AAH+LHGR +GS+ VS Y Y + + R
Sbjct: 1084 CILVEFLRKEAACTAAHSLHGRRFGSRIVSAGYAPHDLYLQKYTR 1128
>ref|NP_850210.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330253741|gb|AEC08835.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 322
Score = 57.4 bits (137), Expect = 7e-06
Identities = 36/119 (30%), Positives = 54/119 (45%)
Frame = +3
Query: 249 PLSESLAATAIHEIQSVTSDTVDNKTSLNMGISNKEGEHTGPVDGEKLTNGEADKNSPNS 428
P S++ A T+ E + + S ++ + + E E+ V + D
Sbjct: 203 PCSDTAAETSTQENEDLHSTEQEHCEKIVEESAQAEAENPQEVASVRTVKTRWDAGDKIE 262
Query: 429 EEGKSTPTSDQLEVASIFVEFLREETACLAAHNLHGREYGSKKVSVSYFSETSYQRWFP 605
EE + P D E IF+E+ R E C AAH+LHGR Y ++ V Y S+ YQ FP
Sbjct: 263 EEQEEDP-EDVFETGCIFIEYRRPEATCDAAHSLHGRLYDNRIVKAEYVSKELYQIRFP 320