BLASTX nr result

ID: Ephedra26_contig00005300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00005300
         (1576 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514707.1| hypothetical protein RCOM_1470750 [Ricinus c...    60   2e-06

>ref|XP_002514707.1| hypothetical protein RCOM_1470750 [Ricinus communis]
            gi|223546311|gb|EEF47813.1| hypothetical protein
            RCOM_1470750 [Ricinus communis]
          Length = 925

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
 Frame = +1

Query: 478  AEILMSIATKENFGCLEDINFQSSDALCQKTSLEWLANVIPEHSDSLPARDSYFSRSPTP 657
            AE ++SI+  E     E+  F+  +A  +  SL W A +     D           S   
Sbjct: 688  AEAIVSISLSEPQNETENETFRQPEA-AESVSLHWFAKLASSIVDD--------PESEFG 738

Query: 658  VSDNQRNAFYEDTKPEESVESYEALALKLEECADGDSSKLYSLEHKTIEHSTCYSNGILK 837
            V  + RN   +D    + ++ +EA+ LKLE   +    K    + +     +  S     
Sbjct: 739  VVLSCRNPDDQDEYLSDGIDYFEAMTLKLESKEEEYCCKANVQKEEVACPDSLPSQPRRG 798

Query: 838  RSKRGNYQNVLNKDNLL-SISTLSRQEISEDMQNISAIIRSTGGSTFGGFDKGSRDSATG 1014
            R++RG  Q    +  +L S+++LSR E++ED+Q I  +I +   ST      G+R    G
Sbjct: 799  RTRRGRQQQKDFQSEILPSLASLSRYEVTEDLQVIGGLIEAARRST------GARTGRIG 852

Query: 1015 DDWLSLPKRRRSRSWTNSKVARFLIDEMDSSKALKKDSTMLDEVAFSGKWEKPTRKRRMH 1194
              W +  +RRR  S ++SK          S +  ++    +++ +  G W K TR+RR H
Sbjct: 853  --WTTGRRRRRRTSMSSSKAESSACTA--SRQQSRQGECRIEDWSLIG-WGKKTRRRRGH 907

Query: 1195 R 1197
            R
Sbjct: 908  R 908


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