BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00005215
         (1418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001760032.1| predicted protein [Physcomitrella patens] gi...    89   3e-15
ref|XP_002966000.1| hypothetical protein SELMODRAFT_407201 [Sela...    74   2e-10
gb|EOX90616.1| Uncharacterized protein TCM_000033 [Theobroma cacao]    65   7e-08
emb|CBI36039.3| unnamed protein product [Vitis vinifera]               64   2e-07
ref|XP_002515951.1| conserved hypothetical protein [Ricinus comm...    62   5e-07
ref|XP_006426855.1| hypothetical protein CICLE_v10026494mg [Citr...    60   2e-06
ref|XP_006485734.1| PREDICTED: DNA-directed RNA polymerase III s...    60   2e-06
ref|XP_006465707.1| PREDICTED: DNA-directed RNA polymerase III s...    60   2e-06
ref|XP_006440853.1| hypothetical protein CICLE_v10022257mg [Citr...    60   2e-06

>ref|XP_001760032.1| predicted protein [Physcomitrella patens]
           gi|162688782|gb|EDQ75157.1| predicted protein
           [Physcomitrella patens]
          Length = 357

 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
 Frame = +3

Query: 9   GGGRFRNYPILQKDEFGNF----KKPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLL 176
           G GR      L +D+ GN     K+  P  LFP +++ LP  P +++ D  LV +R HL 
Sbjct: 9   GRGRGGGAQFLARDDDGNLIFNKKQEGPTPLFPKVER-LPDLPTVTKRDEMLVFRRHHLQ 67

Query: 177 SLWNNSPYFIEPPNKKAKVGLAAEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELLT 356
             W  SPY+IE    K + G+ AEI+RYSD+Y+      R PL+S LKL  + FP ELL 
Sbjct: 68  KAWECSPYYIEKIKTKTE-GIVAEIDRYSDRYRTNRRANRVPLNSVLKLTGASFPVELLG 126

Query: 357 QG 362
           QG
Sbjct: 127 QG 128


>ref|XP_002966000.1| hypothetical protein SELMODRAFT_407201 [Selaginella moellendorffii]
           gi|300166814|gb|EFJ33420.1| hypothetical protein
           SELMODRAFT_407201 [Selaginella moellendorffii]
          Length = 242

 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
 Frame = +3

Query: 3   RFGGGRFRNYPILQKDEFGNF----KKPDPPQLFPDLKKELPSFPEISE-MDTYLVGKRR 167
           R GGGR    PI+ +DE G      K   PP LFP ++  LP  P+I++  + +LV +RR
Sbjct: 17  RGGGGRAG--PII-RDETGGILTARKLEGPPPLFPAVET-LPERPDITQGNNAFLVERRR 72

Query: 168 HLLSLWNNSPYFIEPPNKKAKVGLAAEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAE 347
            L + WN S Y+IE  +K     + +++ER   + KP     R  LS YL+L+  +FPAE
Sbjct: 73  TLHTFWNESAYYIEAVDKDTS-SVPSDVERCLSRSKPGPQTKRKSLSLYLQLSSMFFPAE 131

Query: 348 LLTQGSKRVREVKGSELW 401
           LL    K+ RE     +W
Sbjct: 132 LLGNQRKKRRENDEEGIW 149


>gb|EOX90616.1| Uncharacterized protein TCM_000033 [Theobroma cacao]
          Length = 418

 Score = 65.1 bits (157), Expect = 7e-08
 Identities = 44/126 (34%), Positives = 62/126 (49%)
 Frame = +3

Query: 9   GGGRFRNYPILQKDEFGNFKKPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLLSLWN 188
           G GR R Y       F  + KP+P  LFPD+  ELP    + E  T ++   R L + W 
Sbjct: 216 GRGRGRGYG---GGGFSGYFKPEPVVLFPDV--ELPDVKGVPEEKTLVIWNSR-LQNYWK 269

Query: 189 NSPYFIEPPNKKAKVGLAAEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELLTQGSK 368
            SPY++E     +K   + +IERYSD  KP++   R  L+  L+L    FP EL+    +
Sbjct: 270 ASPYYLE--ENVSKKSQSKDIERYSDWEKPKSTSKRDSLNQILQLQSHNFPKELIGDSRR 327

Query: 369 RVREVK 386
             R  K
Sbjct: 328 AQRSAK 333


>emb|CBI36039.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = +3

Query: 69  KPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLLSLWNNSPYFIEP--PNKKAKVGLA 242
           K +P  LFPD+  ELP    + E +  LV +   L + W +SPY++E   P K      +
Sbjct: 74  KQEPFVLFPDI--ELPDVSSVPE-EKNLVIRNARLQNYWKSSPYYLEDIVPRKSQ----S 126

Query: 243 AEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELLTQGSKRVREVKGSELWVSQADGS 422
            +IER+SD+ K R  + R PL   L+L  + FP EL+ QG K     K    W  ++D  
Sbjct: 127 TDIERFSDRVKLRTTLKRDPLEQILRLTSNNFPLELV-QGMKGATHNKRKVQWNPESDMQ 185

Query: 423 KYD 431
           K +
Sbjct: 186 KLE 188


>ref|XP_002515951.1| conserved hypothetical protein [Ricinus communis]
           gi|223544856|gb|EEF46371.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   RFGGGRFRNYPILQKDEFG-NFKKPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLLS 179
           RFGGGR           FG  F + +P   FP++  ELP    + E    +VG  + L++
Sbjct: 83  RFGGGR---------GGFGFGFARQEPFVEFPEV--ELPDRKAVKEERVLVVGNAK-LVA 130

Query: 180 LWNNSPYFIEPPNKKAKVGLAAEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELLTQ 359
            W +SPY++E    K    +  ++ER+SD  K + ++ R  L ++L+L  S FP EL+  
Sbjct: 131 FWKSSPYYLEETISKKSQSM--DVERFSDWGKSKTSLKRDALGNFLQLRSSNFPKELIA- 187

Query: 360 GSKRVREVKGSELWVSQADGSKYD 431
           G+K  R       W   +D  K+D
Sbjct: 188 GAKWERPNPKKVRWDPNSDLQKWD 211


>ref|XP_006426855.1| hypothetical protein CICLE_v10026494mg [Citrus clementina]
           gi|557528845|gb|ESR40095.1| hypothetical protein
           CICLE_v10026494mg [Citrus clementina]
          Length = 208

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
 Frame = +3

Query: 63  FKKPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLLSLWNNSPYFIEPPNKKAKVGLA 242
           F K +P +LFP++  ELP    +  ++  L+     LL+ W +SPYF+E      K   +
Sbjct: 21  FAKQEPFELFPEI--ELPDHKNVP-IERNLILWNSRLLNYWKSSPYFLE--ENVEKNSQS 75

Query: 243 AEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 377
            +IERYSD  KP+ +  R  ++ +L+L  S FPAEL+      +  KRVR
Sbjct: 76  VDIERYSDWNKPKVSSNRGSINQFLQLHSSNFPAELVKDSREQRNPKRVR 125


>ref|XP_006485734.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc31-like
           [Citrus sinensis]
          Length = 208

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
 Frame = +3

Query: 63  FKKPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLLSLWNNSPYFIEPPNKKAKVGLA 242
           F K +P +LFP++  ELP+   I  ++  L+     LL+ W +SPYF+E   +K    + 
Sbjct: 21  FAKQEPFKLFPEI--ELPAHKNIP-IEKNLILWNSRLLNYWKSSPYFLEESVEKNSQSV- 76

Query: 243 AEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 377
            +IERYSD  KP+ +  R  ++ +L+L  + FPAEL+      +  KRVR
Sbjct: 77  -DIERYSDWNKPKVSSNRGSINQFLQLRSNNFPAELVKDSREQRNPKRVR 125


>ref|XP_006465707.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc31-like
           isoform X1 [Citrus sinensis]
           gi|568822579|ref|XP_006465708.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc31-like isoform X2 [Citrus
           sinensis]
          Length = 208

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
 Frame = +3

Query: 63  FKKPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLLSLWNNSPYFIEPPNKKAKVGLA 242
           F K +P +LFP++  ELP    +  ++  L+     LL+ W +SPYF+E      K   +
Sbjct: 21  FAKQEPFELFPEI--ELPDHKNVL-IERNLILWNSRLLNYWKSSPYFLE--ENVEKNSQS 75

Query: 243 AEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 377
            +IERYSD  KP+ +  R  ++ +L+L  S FPAEL+      +  KRVR
Sbjct: 76  VDIERYSDWNKPKVSSNRGSINQFLQLHSSNFPAELVKDSREQRNPKRVR 125


>ref|XP_006440853.1| hypothetical protein CICLE_v10022257mg [Citrus clementina]
           gi|557543115|gb|ESR54093.1| hypothetical protein
           CICLE_v10022257mg [Citrus clementina]
          Length = 208

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
 Frame = +3

Query: 63  FKKPDPPQLFPDLKKELPSFPEISEMDTYLVGKRRHLLSLWNNSPYFIEPPNKKAKVGLA 242
           F K +P +LFP++  ELP+   I  ++  L+     LL+ W +SPYF+E      K   +
Sbjct: 21  FAKQEPFKLFPEI--ELPAHKNIP-IEKNLILWNSRLLNYWKSSPYFLE--ENVEKNSQS 75

Query: 243 AEIERYSDKYKPRNNVYRPPLSSYLKLAQSYFPAELL-----TQGSKRVR 377
            +IERYSD  KP+ +  R  ++ +L+L  + FPAEL+      +  KRVR
Sbjct: 76  VDIERYSDWNKPKVSSNRGSINQFLQLRSNNFPAELVKDSREQRNPKRVR 125