BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004991
         (1446 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH72675.1| RAD23 [Pinus sylvestris var. mongolica]                443   e-121
gb|ABK24371.1| unknown [Picea sitchensis]                             441   e-121
ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [A...   412   e-112
ref|XP_002512770.1| uv excision repair protein rad23, putative [...   408   e-111
ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [S...   407   e-111
ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23...   406   e-110
ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [C...   405   e-110
ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23...   400   e-109
gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1...   399   e-108
ref|XP_004303217.1| PREDICTED: putative DNA repair protein RAD23...   398   e-108
ref|XP_004147454.1| PREDICTED: putative DNA repair protein RAD23...   397   e-108
ref|XP_006385947.1| hypothetical protein POPTR_0003s18540g [Popu...   397   e-108
ref|NP_565216.2| ubiquitin receptor RAD23b [Arabidopsis thaliana...   397   e-108
gb|ABG89119.1| Rad23-3Ai [synthetic construct]                        397   e-108
ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarp...   396   e-107
ref|XP_006646967.1| PREDICTED: ubiquitin receptor RAD23b-like is...   395   e-107
gb|EMJ16752.1| hypothetical protein PRUPE_ppa007284mg [Prunus pe...   395   e-107
ref|NP_850982.1| ubiquitin receptor RAD23b [Arabidopsis thaliana...   394   e-107
ref|XP_006302422.1| hypothetical protein CARUB_v10020503mg [Caps...   394   e-107
dbj|BAC76390.1| RAD23-like protein [Arabidopsis thaliana]             394   e-107

>gb|ACH72675.1| RAD23 [Pinus sylvestris var. mongolica]
          Length = 390

 Score =  443 bits (1139), Expect = e-121
 Identities = 244/386 (63%), Positives = 277/386 (71%), Gaps = 29/386 (7%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKLSVKTLKG  FEI+ Q +DT+MAVKKQIEEI+GKD YPCGQQLLIHQGKVLKDDTTIE
Sbjct: 1    MKLSVKTLKGNRFEIEAQPNDTVMAVKKQIEEIQGKDTYPCGQQLLIHQGKVLKDDTTIE 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSAT----------------PSSTTVKQGEXXXXXX 375
            +N ITEN FLVVMLTKSK+S+A G S+T                P+S  V+         
Sbjct: 61   DNTITENGFLVVMLTKSKTSSAVGASSTSTASTVQPTQTSTPPAPASNPVEVASPVVSQL 120

Query: 376  XXXXXXXXXXXXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRA 555
                                 DPY EAAS LV G++LEQTIQQ+LDMGGG+WDR+TVVRA
Sbjct: 121  PAVAPAASVSAPETTAVQANADPYGEAASILVAGSNLEQTIQQMLDMGGGSWDRDTVVRA 180

Query: 556  LRAAYNNPERAIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQN----------PSTAP 705
            LRAAYNNPERA++YLYSGIPE AEIAVPVA         ++Q  N           +TAP
Sbjct: 181  LRAAYNNPERAVEYLYSGIPETAEIAVPVARSPPSNPGATDQGTNNVIAGESDSAEATAP 240

Query: 706  SGGPNVAPLNLFPQGTPNI--AAGNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSK 879
            SGGPN APLNLFPQG PN+  AAG G LDFLR+N QFQ LR+MVQ NPQILQPMLQELSK
Sbjct: 241  SGGPNAAPLNLFPQGLPNLGAAAGGGALDFLRNNPQFQALRTMVQANPQILQPMLQELSK 300

Query: 880  QNPQLMGLLEENQEEFLSLINETDQDAEEDQLGDF-EEMPHTINVTEEEHAAIERLEAMG 1056
            QNPQLM L++++Q EFL LINE   + + D LG F  EMP +INVT EE  AIERLEAMG
Sbjct: 301  QNPQLMRLIQDHQAEFLHLINE---ETDGDLLGQFAAEMPQSINVTPEEREAIERLEAMG 357

Query: 1057 FEHSLVIEAFLACDKNEQLAANYLLE 1134
            F+ +LVIEAFLACDKNE+LAANYLLE
Sbjct: 358  FDRALVIEAFLACDKNEELAANYLLE 383


>gb|ABK24371.1| unknown [Picea sitchensis]
          Length = 390

 Score =  441 bits (1133), Expect = e-121
 Identities = 242/386 (62%), Positives = 275/386 (71%), Gaps = 29/386 (7%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKLSVKTLKG  FEI  Q +DT+MAVKKQIEEI+GKD YPCGQQLLIHQGKVLKDDTTIE
Sbjct: 1    MKLSVKTLKGNRFEIDAQPNDTVMAVKKQIEEIQGKDTYPCGQQLLIHQGKVLKDDTTIE 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSAT----------------PSSTTVKQGEXXXXXX 375
            +N ITEN FLVVMLTK+K+S+A+G S+T                P+S  V+         
Sbjct: 61   DNQITENGFLVVMLTKTKTSSAAGASSTSSASTIQHTQTSTPLAPASNPVEAASPVVSQP 120

Query: 376  XXXXXXXXXXXXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRA 555
                                 DPY EAAS LV G++LEQTIQQ+LDMGGG+WDR+TVVRA
Sbjct: 121  PAVAPATSVSAPETTAVQANADPYGEAASILVAGSNLEQTIQQMLDMGGGSWDRDTVVRA 180

Query: 556  LRAAYNNPERAIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQN----------PSTAP 705
            LRAAYNNPERA++YLYSGIPE AEIAVPVA      +  + Q  N           +T P
Sbjct: 181  LRAAYNNPERAVEYLYSGIPETAEIAVPVARSPPSNSGAAGQGTNDVVAAESDLAQATVP 240

Query: 706  SGGPNVAPLNLFPQGTPNI--AAGNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSK 879
            SGGPN APLNLFPQG PN+   AG G LDFLR+N QFQ LR+MVQ NPQILQPMLQELSK
Sbjct: 241  SGGPNAAPLNLFPQGLPNLGATAGGGALDFLRNNPQFQALRTMVQANPQILQPMLQELSK 300

Query: 880  QNPQLMGLLEENQEEFLSLINETDQDAEEDQLGDF-EEMPHTINVTEEEHAAIERLEAMG 1056
            QNPQLM L++++Q EFL LINE   + E D LG F  EMP +INVT EE  AIERLEAMG
Sbjct: 301  QNPQLMRLIQDHQAEFLHLINE---ETEGDLLGQFAAEMPQSINVTPEEREAIERLEAMG 357

Query: 1057 FEHSLVIEAFLACDKNEQLAANYLLE 1134
            F+ +LVIEAFLACDKNE+LAANYLLE
Sbjct: 358  FDRALVIEAFLACDKNEELAANYLLE 383


>ref|XP_006845449.1| hypothetical protein AMTR_s00019p00116110 [Amborella trichopoda]
            gi|548848021|gb|ERN07124.1| hypothetical protein
            AMTR_s00019p00116110 [Amborella trichopoda]
          Length = 370

 Score =  412 bits (1058), Expect = e-112
 Identities = 222/363 (61%), Positives = 264/363 (72%), Gaps = 6/363 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ +DT+MAVKK IEE++GKD YPCGQQLLIH GKVLKD+TT+E
Sbjct: 1    MKLTVKTLKGNHFEIRVQANDTVMAVKKHIEELQGKDNYPCGQQLLIHNGKVLKDETTLE 60

Query: 244  ENAITENSFLVVMLTKSKSSTASG-VSATPS-STTVKQGEXXXXXXXXXXXXXXXXXXXX 417
            EN ++E+ FLVVML+KSK+S + G  SA PS + T  Q                      
Sbjct: 61   ENKVSEDGFLVVMLSKSKTSGSGGATSAQPSAAATNPQNPTPAPESRPQPMASQNPARGS 120

Query: 418  XXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDY 597
                   + Y +AAS LV GN+LEQ IQQILDMGG +WDR+TV RALRAAYNNPERA++Y
Sbjct: 121  DAGPEVTNVYGQAASTLVAGNNLEQMIQQILDMGGDSWDRDTVTRALRAAYNNPERAVEY 180

Query: 598  LYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAP-SGGPNVAPLNLFPQGTP--NIAA 768
            LYSGIP  AE+AVPV   S+  A  + +      AP S GPN +PLN+FPQG+P     A
Sbjct: 181  LYSGIPAAAEVAVPVVPTSAQAADATTEADVAGVAPNSAGPNASPLNMFPQGSPTSGAIA 240

Query: 769  GNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINET 948
            G G+LDFLR+NEQFQ LR MVQ NPQILQPMLQELSKQNPQL+ L++E+Q EFL LINE 
Sbjct: 241  GGGSLDFLRNNEQFQTLRHMVQANPQILQPMLQELSKQNPQLLRLIQEHQAEFLQLINEP 300

Query: 949  DQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANY 1125
             + AE D  G  E +MP +I VT EE  AIERLEAMGF+ +LVIEAFLACD+NE+LA NY
Sbjct: 301  AEGAEGDLFGQAEQDMPQSITVTPEEREAIERLEAMGFDRALVIEAFLACDRNEELAINY 360

Query: 1126 LLE 1134
            LLE
Sbjct: 361  LLE 363


>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
            gi|223547781|gb|EEF49273.1| uv excision repair protein
            rad23, putative [Ricinus communis]
          Length = 359

 Score =  408 bits (1049), Expect = e-111
 Identities = 220/364 (60%), Positives = 265/364 (72%), Gaps = 7/364 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ +DT+MAVKK IE+++GKD YPCGQQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSAT-PSSTTVKQGEXXXXXXXXXXXXXXXXXXXXX 420
            +N +TE+ FLVVML+KSK+S +SG S+T P++ T                          
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSGSSGTSSTQPAAAT----------PPTTAPSSNSTPAVEV 110

Query: 421  XXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYL 600
                  D Y EAASNLV G++LEQTIQQI+DMGGGTWD+ETV RALRAAYNNPERA+DYL
Sbjct: 111  QPPTQTDTYGEAASNLVAGDNLEQTIQQIMDMGGGTWDKETVTRALRAAYNNPERAVDYL 170

Query: 601  YSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIAAGN-- 774
            YSGIPE AE+AVPVAH  +G+A  +     P+   SG PN +PLN+FPQ   + A G   
Sbjct: 171  YSGIPETAEVAVPVAHLPAGQATETGAA--PAAPLSGVPNSSPLNMFPQEALSAAGGGSA 228

Query: 775  ---GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINE 945
               G+LDFLR+N QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ +++E+  EFL L+NE
Sbjct: 229  GGLGSLDFLRNNAQFQTLRSMVQANPQILQPMLQELGKQNPQLLRMIQEHHAEFLQLLNE 288

Query: 946  TDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAAN 1122
              + +E D     E +MPH INVT  E AAIERL AMGF+ +LVIEAFLACD+NE LAAN
Sbjct: 289  PLEGSEGDIFDQGEQDMPHAINVTPAEQAAIERLVAMGFDRALVIEAFLACDRNEVLAAN 348

Query: 1123 YLLE 1134
            YLLE
Sbjct: 349  YLLE 352


>ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [Solanum tuberosum]
          Length = 367

 Score =  407 bits (1047), Expect = e-111
 Identities = 219/363 (60%), Positives = 264/363 (72%), Gaps = 6/363 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ  DTIMAVKK IE+++GKD YPCGQQLLIH GKVLKD++T+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLL 60

Query: 244  ENAITENSFLVVMLTKSKSSTASG-VSATPSSTTVKQGEXXXXXXXXXXXXXXXXXXXXX 420
            EN ++E+ FLVVML+KSK++++SG  SA   +T                           
Sbjct: 61   ENNVSEDGFLVVMLSKSKTASSSGTTSAQQPATAANPTTTPEVIPPSQVPKDVVSASDAA 120

Query: 421  XXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYL 600
                  D Y++AASNLV GNSLEQTIQQ++DMGGG+WD+ETV RALRAAYNNPERA+DYL
Sbjct: 121  AASLPADDYSQAASNLVAGNSLEQTIQQLMDMGGGSWDKETVTRALRAAYNNPERAVDYL 180

Query: 601  YSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIA----A 768
            YSGIPE AE+AVPVA      AA +     P+   SG PN APLNLFPQ   N+A    A
Sbjct: 181  YSGIPETAEVAVPVARGGVNSAAAA-PTAAPTPPSSGAPNSAPLNLFPQ--ENVAGAGSA 237

Query: 769  GNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINET 948
            G G+LDFLR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+  ++E+ +EFL LINE 
Sbjct: 238  GLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHDQEFLQLINEP 297

Query: 949  DQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANY 1125
               ++ D     E E+PHT++VT EE   IERLEAMGF+ +LVIEAFLACD+NE+LAANY
Sbjct: 298  VDGSDGDMFDQAEQEIPHTVSVTPEEQEVIERLEAMGFDRALVIEAFLACDRNEELAANY 357

Query: 1126 LLE 1134
            LLE
Sbjct: 358  LLE 360


>ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23-1-like [Solanum
            lycopersicum]
          Length = 366

 Score =  406 bits (1043), Expect = e-110
 Identities = 218/363 (60%), Positives = 263/363 (72%), Gaps = 6/363 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ  DTIMAVKK IE+++GKD YPCGQQLLIH GKVLKD++T+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLL 60

Query: 244  ENAITENSFLVVMLTKSKSSTASG-VSATPSSTTVKQGEXXXXXXXXXXXXXXXXXXXXX 420
            EN ++E+ FLVVML+KSK++++SG  SA   +T                           
Sbjct: 61   ENNVSEDGFLVVMLSKSKTASSSGTTSAQQPATAANPTTTPEVIPPSQAPKDVVSASDAA 120

Query: 421  XXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYL 600
                  D Y++AASNLV GN+LEQTIQQ++DMGGG+WD+ETV RALRAAYNNPERA+DYL
Sbjct: 121  AASLPADDYSQAASNLVAGNNLEQTIQQLMDMGGGSWDKETVTRALRAAYNNPERAVDYL 180

Query: 601  YSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIA----A 768
            YSGIPE AE++VPVA      AAV      P    SG PN APLNLFPQ   N+A    A
Sbjct: 181  YSGIPETAEVSVPVARGGVNSAAVPTAA--PIAPSSGAPNSAPLNLFPQ--ENVAGGGGA 236

Query: 769  GNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINET 948
            G G+LDFLR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+  ++E+ +EFL LINE 
Sbjct: 237  GLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHDQEFLQLINEP 296

Query: 949  DQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANY 1125
               ++ D     E E+PHT++VT EE   IERLEAMGF+ +LVIEAFLACD+NE+LAANY
Sbjct: 297  VDGSDGDMFDQAEQEIPHTVSVTPEEQEVIERLEAMGFDRALVIEAFLACDRNEELAANY 356

Query: 1126 LLE 1134
            LLE
Sbjct: 357  LLE 359


>ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [Citrus sinensis]
          Length = 377

 Score =  405 bits (1040), Expect = e-110
 Identities = 222/373 (59%), Positives = 268/373 (71%), Gaps = 16/373 (4%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ  DT+MAVKK IE+++GKD YPCGQQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSA------TP------SSTTVKQGEXXXXXXXXXX 387
            +N ++E+ FLVVML+KSK+  ++G S+      TP      S++T  Q            
Sbjct: 61   DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPTPS 120

Query: 388  XXXXXXXXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAA 567
                             D Y +AASNLV GN LEQTIQQI+DMGGGTWD+ETV RAL+AA
Sbjct: 121  IPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA 180

Query: 568  YNNPERAIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAP-SGGPNVAPLNLFP 744
            YNNPERA+DYLYSGIPE AE+AVPVAH  + +AA +        AP SG PN +PLN+FP
Sbjct: 181  YNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGA---AGAAPVSGVPNSSPLNMFP 237

Query: 745  QGTPN--IAAGNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQ 918
            Q T +   A+G G+LDFLR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ L++E+Q
Sbjct: 238  QETLSGAPASGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHQ 297

Query: 919  EEFLSLINETDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLAC 1095
             EFL LINE    +E D     E +MPH INVT  E  AI+RLEAMGF+ +LVIEAFLAC
Sbjct: 298  AEFLQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLAC 357

Query: 1096 DKNEQLAANYLLE 1134
            D+NE+LAANYLLE
Sbjct: 358  DRNEELAANYLLE 370


>ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis sativus]
          Length = 358

 Score =  400 bits (1029), Expect = e-109
 Identities = 212/363 (58%), Positives = 260/363 (71%), Gaps = 6/363 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQL DT+MAVKK IE+++GKD YPCGQQLLIH GKVLKD++T+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSATPSSTTVKQGEXXXXXXXXXXXXXXXXXXXXXX 423
            EN ++E  FLVVML+KSK+S ++G S+T  +      +                      
Sbjct: 61   ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSVQT----- 115

Query: 424  XXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLY 603
                 D Y +AASNLV GN+LEQT+QQ++DMGGG WDRETVVRALRAAYNNPERA+DYLY
Sbjct: 116  -----DTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLY 170

Query: 604  SGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIAAGN--- 774
            SGIPE AE+AVPV    SG+A  +  + +     SG PN APLN+FPQ   +  +G    
Sbjct: 171  SGIPESAEVAVPVGRFGSGQA--TETDASVPAPVSGAPNTAPLNMFPQEALSAGSGGGGG 228

Query: 775  --GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINET 948
              G+L+FLR+N QFQ LR+MV  NPQILQPMLQEL KQNPQL+ L++++  EFL LINE 
Sbjct: 229  NLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLLRLIQDHHAEFLQLINEP 288

Query: 949  DQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANY 1125
              + E +     E +MPH INVT  E AAIERLEAMGF+ +LVIEAFLACD+NE+LAANY
Sbjct: 289  VDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANY 348

Query: 1126 LLE 1134
            LLE
Sbjct: 349  LLE 351


>gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
          Length = 373

 Score =  399 bits (1024), Expect = e-108
 Identities = 217/368 (58%), Positives = 261/368 (70%), Gaps = 11/368 (2%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ +DT+MAVKK IE+ +GKD YPCGQQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 244  ENAITENSFLVVMLTKSKS------STASGVSATPSST--TVKQGEXXXXXXXXXXXXXX 399
            +N ++E+ FLVVML+KSKS      S+A   S+TPS T                      
Sbjct: 61   DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSTPSVTPPASNPAPAPEAPAQAPTSKGT 120

Query: 400  XXXXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNP 579
                         D Y++AASNLV GN+LEQTIQQ++DMGGG WD+ETV RALRAAYNNP
Sbjct: 121  TSASDTATANPNTDTYSQAASNLVAGNNLEQTIQQLMDMGGGNWDKETVTRALRAAYNNP 180

Query: 580  ERAIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPN 759
            ERA+DYLYSGIPE AE+AVPV    + +   +     P+   SG PN +PLN+FPQ T +
Sbjct: 181  ERAVDYLYSGIPESAEVAVPVGRFPTSQTTETGAA--PAAPVSGAPNSSPLNMFPQETLS 238

Query: 760  --IAAGNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLS 933
               A G G+LDFLR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ L++E+  EFL 
Sbjct: 239  GAGAGGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHHAEFLQ 298

Query: 934  LINETDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQ 1110
            LINE  + +E D     E +MPH INVT  E  AIERLEAMGF+ +LVIEAFLACD+NE+
Sbjct: 299  LINEPLEGSEGDIFDQAEQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEE 358

Query: 1111 LAANYLLE 1134
            LAANYLLE
Sbjct: 359  LAANYLLE 366


>ref|XP_004303217.1| PREDICTED: putative DNA repair protein RAD23-1-like [Fragaria vesca
            subsp. vesca]
          Length = 371

 Score =  398 bits (1023), Expect = e-108
 Identities = 215/366 (58%), Positives = 256/366 (69%), Gaps = 9/366 (2%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ  DT+MAVKK IE+I+GKD YPCGQQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSATPSSTTVKQG------EXXXXXXXXXXXXXXXX 405
            +N +TE+ FLVVML+KSK+S  +G S+   ++T+                          
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSGLAGASSAQPASTIPPTTAPITTSTTRAEAPIQTPPSEST 120

Query: 406  XXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPER 585
                       D Y +AASNLV G +L++TIQQI+DMGGG WDRETV RALRAAYNNPER
Sbjct: 121  TPASDTADVHTDTYGQAASNLVAGTNLDETIQQIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 586  AIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIA 765
            A+DYLYS IPE AE+AVPVAH    +A  +     P    SG PN APLN+FPQ   + A
Sbjct: 181  AVDYLYSSIPETAEVAVPVAHFPGSQATETGITNAPPV--SGAPNSAPLNMFPQEALSGA 238

Query: 766  AGN--GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLI 939
                 G+LDFLR+N QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ L++E+  EFL LI
Sbjct: 239  GAGALGSLDFLRNNHQFQTLRSMVQANPQILQPMLQELGKQNPQLLRLIQEHHAEFLQLI 298

Query: 940  NETDQDAEEDQLGD-FEEMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLA 1116
            NE  + +E D      +EMPH INVT  E  AIERLEAMGF+ +LVIEAFLACD+NE+LA
Sbjct: 299  NEPLEGSEGDMFDQPDQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELA 358

Query: 1117 ANYLLE 1134
            ANYLLE
Sbjct: 359  ANYLLE 364


>ref|XP_004147454.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis sativus]
          Length = 374

 Score =  397 bits (1021), Expect = e-108
 Identities = 215/371 (57%), Positives = 261/371 (70%), Gaps = 14/371 (3%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HF+I+VQ  DT++ VKK IE ++GKD+YPC QQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSAT------PSSTTVKQGEXXXXXXXXXXXXXXXX 405
            EN ITE+ FLVVML+KSK+  ++G S+T      P++T                      
Sbjct: 61   ENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVA 120

Query: 406  XXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPER 585
                       D Y +AASNLV GN+LEQTIQ+I+DMGGG+WDRETV RALRAAYNNPER
Sbjct: 121  ISDVPTANAQIDTYGQAASNLVSGNNLEQTIQEIMDMGGGSWDRETVTRALRAAYNNPER 180

Query: 586  AIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAP--SGGPNVAPLNLFPQGTPN 759
            A+DYLYSGIPE AE+A PVA P +G+      +   +TAP  SGGPN +PLN+FPQ +  
Sbjct: 181  AVDYLYSGIPETAEVAAPVARPPTGQPI----DAGGATAPPVSGGPNSSPLNMFPQESLA 236

Query: 760  IAAGN-----GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEE 924
             AAG      G+L+FLR+N QFQ LRSMVQ NPQILQ MLQEL KQNPQL+ L++++Q E
Sbjct: 237  AAAGGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAE 296

Query: 925  FLSLINETDQDAEEDQLGD-FEEMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDK 1101
            FL LINE  +  E D      ++MPH INVT  E  AIERLEAMGF+   VIEAFLACD+
Sbjct: 297  FLQLINEPLEGFEGDLFDQPDQDMPHAINVTPAEQQAIERLEAMGFDRDQVIEAFLACDR 356

Query: 1102 NEQLAANYLLE 1134
            NE+LAANYLLE
Sbjct: 357  NEELAANYLLE 367


>ref|XP_006385947.1| hypothetical protein POPTR_0003s18540g [Populus trichocarpa]
            gi|550343468|gb|ERP63744.1| hypothetical protein
            POPTR_0003s18540g [Populus trichocarpa]
          Length = 372

 Score =  397 bits (1020), Expect = e-108
 Identities = 214/365 (58%), Positives = 252/365 (69%), Gaps = 8/365 (2%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEIKV   DTIM VKK IE+ +GKD YPCGQQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSATPSST---TVKQGEXXXXXXXXXXXXXXXXXXX 414
            +N +TE+ FLVVML+KSK+ TA   S  P ST   T                        
Sbjct: 61   DNKVTEDGFLVVMLSKSKTGTAGTSSTQPVSTPPTTTPTSISTPAPDAQALDSKSASASD 120

Query: 415  XXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAID 594
                    D Y +AASNLV G++LEQT+QQI+DMGGGTWD+ETV RALRAAYNNPERA+D
Sbjct: 121  SATANAQSDTYGQAASNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPERAVD 180

Query: 595  YLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQ----GTPNI 762
            YLYSGIPE AE+AVPVA   + +A  +           G PN +PLN+FP+    G    
Sbjct: 181  YLYSGIPETAEVAVPVARFPADQATETGAAPAAPAPAFGAPNSSPLNMFPETISGGGGGA 240

Query: 763  AAGNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLIN 942
              G G+LDFLR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ +++E+  EFL LIN
Sbjct: 241  GGGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRIIQEHHAEFLQLIN 300

Query: 943  ETDQDAEEDQLGD-FEEMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAA 1119
            E    +E D      ++MPH INVT  E  AIERLEAMGF+ +LVIEAFLACD+NEQLAA
Sbjct: 301  EPLDGSEGDIFDQPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEQLAA 360

Query: 1120 NYLLE 1134
            NYLLE
Sbjct: 361  NYLLE 365


>ref|NP_565216.2| ubiquitin receptor RAD23b [Arabidopsis thaliana]
            gi|14334442|gb|AAK59419.1| putative DNA repair protein
            RAD23 [Arabidopsis thaliana] gi|17104777|gb|AAL34277.1|
            putative DNA repair protein RAD23 [Arabidopsis thaliana]
            gi|332198158|gb|AEE36279.1| putative DNA repair protein
            RAD23-1 [Arabidopsis thaliana]
          Length = 365

 Score =  397 bits (1020), Expect = e-108
 Identities = 217/364 (59%), Positives = 257/364 (70%), Gaps = 7/364 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+V   DTIMAVKK IE+ +GKD YPCGQQLLIH GKVLKD+T++ 
Sbjct: 1    MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 244  ENAITENSFLVVMLTKSKSSTASG-VSATPSSTTVKQGEXXXXXXXXXXXXXXXXXXXXX 420
            EN +TE  FLVVML+KSKS  ++G  S  P S T    +                     
Sbjct: 61   ENKVTEEGFLVVMLSKSKSGGSAGQASVQPVSATTSSTKPAAPSTTQSSPVPASPIPAQE 120

Query: 421  XXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYL 600
                  D Y +AAS LV G+SLEQ +QQI++MGGG+WD+ETV RALRAAYNNPERA+DYL
Sbjct: 121  QPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYL 180

Query: 601  YSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIAAGN-- 774
            YSGIP+ AE+AVPV      EA ++     P    SGGPN +PL+LFPQ T   AAG+  
Sbjct: 181  YSGIPQTAEVAVPVP-----EAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGD 234

Query: 775  -GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINE-- 945
             GTL+FLR+N+QFQQLR+MV  NPQILQPMLQEL KQNPQL+ L++ENQ EFL L+NE  
Sbjct: 235  LGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPY 294

Query: 946  TDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAAN 1122
               D E D     E EMPH INVT  E  AI+RLEAMGF+ +LVIEAFLACD+NE+LAAN
Sbjct: 295  EGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAAN 354

Query: 1123 YLLE 1134
            YLLE
Sbjct: 355  YLLE 358


>gb|ABG89119.1| Rad23-3Ai [synthetic construct]
          Length = 365

 Score =  397 bits (1019), Expect = e-108
 Identities = 217/364 (59%), Positives = 256/364 (70%), Gaps = 7/364 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+V   DTIMAVKK IE+ +GKD YPCGQQLLIH GKVLKD+T++ 
Sbjct: 1    MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 244  ENAITENSFLVVMLTKSKSSTASG-VSATPSSTTVKQGEXXXXXXXXXXXXXXXXXXXXX 420
            EN +TE  FLVVML+KSKS  ++G  S  P S T                          
Sbjct: 61   ENKVTEEGFLVVMLSKSKSGGSAGQASVQPVSATTSSTNPAAPSTTQSSPVPASPIPAQE 120

Query: 421  XXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYL 600
                  D Y +AAS LV G+SLEQ +QQI++MGGG+WD+ETV RALRAAYNNPERA+DYL
Sbjct: 121  QPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYL 180

Query: 601  YSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIAAGN-- 774
            YSGIP+ AE+AVPV      EA ++     P    SGGPN +PL+LFPQ T   AAG+  
Sbjct: 181  YSGIPQTAEVAVPVP-----EAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGD 234

Query: 775  -GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINE-- 945
             GTL+FLR+N+QFQQLR+MV  NPQILQPMLQEL KQNPQL+ L++ENQ EFL L+NE  
Sbjct: 235  LGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPY 294

Query: 946  TDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAAN 1122
               D E D     E EMPH INVT  E  AI+RLEAMGF+ +LVIEAFLACD+NE+LAAN
Sbjct: 295  EGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAAN 354

Query: 1123 YLLE 1134
            YLLE
Sbjct: 355  YLLE 358


>ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarpa]
            gi|222841402|gb|EEE78949.1| DNA repair protein RAD23
            [Populus trichocarpa]
          Length = 358

 Score =  396 bits (1017), Expect = e-107
 Identities = 213/362 (58%), Positives = 251/362 (69%), Gaps = 5/362 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEIKV   DTIM VKK IE+ +GKD YPCGQQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSATPSSTTVKQGEXXXXXXXXXXXXXXXXXXXXXX 423
            +N +TE+ FLVVML+KSK+ TA   S  P ST                            
Sbjct: 61   DNKVTEDGFLVVMLSKSKTGTAGTSSTQPVSTP-----------PTTTPTSISTPAPDAQ 109

Query: 424  XXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYLY 603
                 D Y +AASNLV G++LEQT+QQI+DMGGGTWD+ETV RALRAAYNNPERA+DYLY
Sbjct: 110  AFAQSDTYGQAASNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPERAVDYLY 169

Query: 604  SGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQ----GTPNIAAG 771
            SGIPE AE+AVPVA   + +A  +           G PN +PLN+FP+    G      G
Sbjct: 170  SGIPETAEVAVPVARFPADQATETGAAPAAPAPAFGAPNSSPLNMFPETISGGGGGAGGG 229

Query: 772  NGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINETD 951
             G+LDFLR+N+QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ +++E+  EFL LINE  
Sbjct: 230  LGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRIIQEHHAEFLQLINEPL 289

Query: 952  QDAEEDQLGD-FEEMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAANYL 1128
              +E D      ++MPH INVT  E  AIERLEAMGF+ +LVIEAFLACD+NEQLAANYL
Sbjct: 290  DGSEGDIFDQPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEQLAANYL 349

Query: 1129 LE 1134
            LE
Sbjct: 350  LE 351


>ref|XP_006646967.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X2 [Oryza
            brachyantha]
          Length = 370

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/366 (58%), Positives = 257/366 (70%), Gaps = 9/366 (2%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ HDTIMAVKK IEEI+GKD+YP GQQLLIH GKVLKD++T+E
Sbjct: 1    MKLTVKTLKGTHFEIRVQPHDTIMAVKKNIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE 60

Query: 244  ENAITENSFLVVMLTKSKSSTASG-----VSATPSSTTVKQGEXXXXXXXXXXXXXXXXX 408
            EN ++E+ FLVVML+KSK+S +SG      S+TPS+      +                 
Sbjct: 61   ENKVSEDGFLVVMLSKSKASGSSGALTALASSTPSTRQAPPPDAPQQATQPPAAPSTTPQ 120

Query: 409  XXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERA 588
                      + Y +AASNL+ G+SL+ TI Q+++MGGG+WDR+ V RALRA YNNPERA
Sbjct: 121  LERPPADDPSNAYGQAASNLLSGSSLDTTINQLMEMGGGSWDRDKVKRALRAPYNNPERA 180

Query: 589  IDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNI-- 762
            ++YLYSGIP  AE+AVP     +     S+  +  S   SG PN +PLNLFPQG PN   
Sbjct: 181  VEYLYSGIPVTAEVAVPAGGQGANTTEPSSTTREASL--SGIPNTSPLNLFPQGGPNDGG 238

Query: 763  AAGNGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLIN 942
             AG GTL+FLR N+QFQ LR MV  NPQILQPMLQELSKQNPQL+ L++EN +EFL LIN
Sbjct: 239  GAGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENHDEFLQLIN 298

Query: 943  ETDQDAEEDQLG--DFEEMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLA 1116
            E    A+ D L   D +EMPH INVT EE  AI RLEAMGF+ + VIEAF ACD+NEQLA
Sbjct: 299  EPFDGADGDFLDQPDQDEMPHAINVTPEEQEAIGRLEAMGFDRARVIEAFFACDRNEQLA 358

Query: 1117 ANYLLE 1134
             NYLLE
Sbjct: 359  VNYLLE 364


>gb|EMJ16752.1| hypothetical protein PRUPE_ppa007284mg [Prunus persica]
          Length = 374

 Score =  395 bits (1014), Expect = e-107
 Identities = 216/370 (58%), Positives = 257/370 (69%), Gaps = 13/370 (3%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+VQ  DT+MAVKK IE+++GKD YPCGQQLLIH GKVLKD+TT+ 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSAT------PSSTTVKQGEXXXXXXXXXXXXXXXX 405
            +N +TE+ FLVVML+KSK+S  +G S+T      P  T                      
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSGLAGASSTQPTSTNPPPTPPTTNSTTRPEAPAQPPPVQST 120

Query: 406  XXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPER 585
                       D Y +AAS L+ G +LEQTIQQI+DMGGG WDRETV RALRAAYNNPER
Sbjct: 121  ISASDSANVHTDTYGQAASTLLAGTNLEQTIQQIMDMGGGNWDRETVTRALRAAYNNPER 180

Query: 586  AIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAP-SGGPNVAPLNLFPQGTPNI 762
            A+DYLYS IPE AE+AVPV H  + +A  +      + AP SG PN APLN+FPQ T + 
Sbjct: 181  AVDYLYSSIPETAEVAVPVGHFPASQATETGA---ANAAPVSGAPNSAPLNMFPQETLSG 237

Query: 763  AAGN--GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSL 936
            A     G+L FLR+N QFQ LRSMVQ NPQILQPMLQEL KQNPQL+ L++E+  EFL L
Sbjct: 238  AGAGALGSLAFLRNNRQFQALRSMVQANPQILQPMLQELGKQNPQLLRLIQEHHTEFLQL 297

Query: 937  INETDQDAEEDQL----GDFEEMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKN 1104
            INE  + +E D      G  ++MPH INVT  E  AIERLEAMGF+ +LVIEAFLACD+N
Sbjct: 298  INEPLEGSEGDIFDQPDGPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRN 357

Query: 1105 EQLAANYLLE 1134
            E+LAANYLLE
Sbjct: 358  EELAANYLLE 367


>ref|NP_850982.1| ubiquitin receptor RAD23b [Arabidopsis thaliana]
            gi|73620991|sp|Q84L33.3|RD23B_ARATH RecName:
            Full=Ubiquitin receptor RAD23b; Short=AtRAD23b; AltName:
            Full=Putative DNA repair protein RAD23-1; AltName:
            Full=RAD23-like protein 1; Short=AtRAD23-1
            gi|21593616|gb|AAM65583.1| DNA repair protein RAD23,
            putative [Arabidopsis thaliana]
            gi|110735096|gb|ABG89118.1| Rad23-3Aii [synthetic
            construct] gi|332198160|gb|AEE36281.1| putative DNA
            repair protein RAD23-1 [Arabidopsis thaliana]
          Length = 371

 Score =  394 bits (1011), Expect = e-107
 Identities = 216/370 (58%), Positives = 258/370 (69%), Gaps = 13/370 (3%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+V   DTIMAVKK IE+ +GKD YPCGQQLLIH GKVLKD+T++ 
Sbjct: 1    MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVSAT-------PSSTTVKQGEXXXXXXXXXXXXXXX 402
            EN +TE  FLVVML+KSKS  ++G ++        P S T    +               
Sbjct: 61   ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPAS 120

Query: 403  XXXXXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPE 582
                        D Y +AAS LV G+SLEQ +QQI++MGGG+WD+ETV RALRAAYNNPE
Sbjct: 121  PIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPE 180

Query: 583  RAIDYLYSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNI 762
            RA+DYLYSGIP+ AE+AVPV      EA ++     P    SGGPN +PL+LFPQ T   
Sbjct: 181  RAVDYLYSGIPQTAEVAVPVP-----EAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-A 234

Query: 763  AAGN---GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLS 933
            AAG+   GTL+FLR+N+QFQQLR+MV  NPQILQPMLQEL KQNPQL+ L++ENQ EFL 
Sbjct: 235  AAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQ 294

Query: 934  LINE--TDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKN 1104
            L+NE     D E D     E EMPH INVT  E  AI+RLEAMGF+ +LVIEAFLACD+N
Sbjct: 295  LVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRN 354

Query: 1105 EQLAANYLLE 1134
            E+LAANYLLE
Sbjct: 355  EELAANYLLE 364


>ref|XP_006302422.1| hypothetical protein CARUB_v10020503mg [Capsella rubella]
            gi|482571132|gb|EOA35320.1| hypothetical protein
            CARUB_v10020503mg [Capsella rubella]
          Length = 368

 Score =  394 bits (1011), Expect = e-107
 Identities = 215/367 (58%), Positives = 259/367 (70%), Gaps = 10/367 (2%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+V   DTIMAVKK IE+ +GKD YPCGQQLLIH GKVLKD+T++ 
Sbjct: 1    MKLTVKTLKGNHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 244  ENAITENSFLVVMLTKSKSSTASGVS----ATPSSTTVKQGEXXXXXXXXXXXXXXXXXX 411
            EN +TE  FLVVML+KSK++ + G S    AT +++T    +                  
Sbjct: 61   ENKVTEEGFLVVMLSKSKTAGSVGQSSAQPATATTSTTSSAKPAAPSTIQSTAVPTSSIP 120

Query: 412  XXXXXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAI 591
                     D Y EAAS LV G+SLEQ +QQI++MGGG+WD+ETV RALRAAYNNPERA+
Sbjct: 121  SQEQPRAQTDTYGEAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAV 180

Query: 592  DYLYSGIPEVAEIAVPV-AHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIAA 768
            DYLYSGIPE AE+AVPV    S+G  A       P T  SGGPN +PL+LFPQ T   A 
Sbjct: 181  DYLYSGIPETAEVAVPVPVAQSAGSGAA------PVTPASGGPNSSPLDLFPQETVAAAG 234

Query: 769  G--NGTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLIN 942
               +GTL+FLR+N+QFQQLR+MV  NPQILQPMLQEL KQNPQL+ L++ENQ EFL L+N
Sbjct: 235  SGDHGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVN 294

Query: 943  E--TDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQL 1113
            E     D + D     E EMPH +NVT  E  AI+RLEAMGF+ +LVIEAFLAC++NE+L
Sbjct: 295  EPYEGSDGDADMFDPPEQEMPHAVNVTPAEQEAIQRLEAMGFDRALVIEAFLACERNEEL 354

Query: 1114 AANYLLE 1134
            AANYLLE
Sbjct: 355  AANYLLE 361


>dbj|BAC76390.1| RAD23-like protein [Arabidopsis thaliana]
          Length = 365

 Score =  394 bits (1011), Expect = e-107
 Identities = 215/364 (59%), Positives = 256/364 (70%), Gaps = 7/364 (1%)
 Frame = +1

Query: 64   MKLSVKTLKGVHFEIKVQLHDTIMAVKKQIEEIEGKDAYPCGQQLLIHQGKVLKDDTTIE 243
            MKL+VKTLKG HFEI+V   DTIMAVKK IE+ +GKD YPCGQQLLIH GKVLKD+T++ 
Sbjct: 1    MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 244  ENAITENSFLVVMLTKSKSSTASG-VSATPSSTTVKQGEXXXXXXXXXXXXXXXXXXXXX 420
            EN +TE  FLVVML+KSKS  ++G  S  P S T    +                     
Sbjct: 61   ENKVTEEGFLVVMLSKSKSGGSAGQASVQPVSATTSSTKPAAPSTTQSSPVPASPIPAQE 120

Query: 421  XXXXXXDPYAEAASNLVGGNSLEQTIQQILDMGGGTWDRETVVRALRAAYNNPERAIDYL 600
                  D Y +AAS LV G+SLEQ +QQI++MGGG+WD+ETV RALRAAYNNPERA+DYL
Sbjct: 121  QPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYL 180

Query: 601  YSGIPEVAEIAVPVAHPSSGEAAVSNQEQNPSTAPSGGPNVAPLNLFPQGTPNIAAGN-- 774
            YSGIP+ AE+AVPV      EA ++     P    SGGPN +PL+LFPQ T   AAG+  
Sbjct: 181  YSGIPQTAEVAVPVP-----EAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGD 234

Query: 775  -GTLDFLRDNEQFQQLRSMVQENPQILQPMLQELSKQNPQLMGLLEENQEEFLSLINE-- 945
             GTL+FLR+N+Q +QLR+MV  NPQILQPMLQEL KQNPQL+ L++ENQ EFL L+NE  
Sbjct: 235  LGTLEFLRNNDQLEQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPY 294

Query: 946  TDQDAEEDQLGDFE-EMPHTINVTEEEHAAIERLEAMGFEHSLVIEAFLACDKNEQLAAN 1122
               D E D     E EMPH INVT  E  AI+RLEAMGF+ +LVIEAFLACD+NE+LAAN
Sbjct: 295  EGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAAN 354

Query: 1123 YLLE 1134
            YLLE
Sbjct: 355  YLLE 358