BLASTX nr result

ID: Ephedra26_contig00004947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004947
         (936 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844055.1| hypothetical protein AMTR_s00006p00245940 [A...    65   3e-08
gb|ADE76664.1| unknown [Picea sitchensis]                              59   2e-06

>ref|XP_006844055.1| hypothetical protein AMTR_s00006p00245940 [Amborella trichopoda]
           gi|548846454|gb|ERN05730.1| hypothetical protein
           AMTR_s00006p00245940 [Amborella trichopoda]
          Length = 672

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 55/148 (37%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
 Frame = +1

Query: 208 NALSALKKLRRLTLFNVSKGAAI-----LELDDNMPEVLKDLHYLSMDRFKLPKSISHFR 372
           N+LS L+ L  LTL  ++KG  I     LE     P +L+ L  LS    KLP      R
Sbjct: 450 NSLSNLQCLPSLTL--LAKGDTIQTRHNLEAVLQPPALLEKLQ-LSGKLEKLPSWFGTLR 506

Query: 373 QLQELILFSTHVEDYGDLGLERLPCLAYLSISYGKCEEFPESFGKAGAFPRLVELKLSDF 552
            L +LIL S+ + + G   L+ LP L  L +        P     AG FP+L E  L + 
Sbjct: 507 NLTKLILLSSKLNEEGFYELQELPRLRILKLYAYVGNGMP---CMAGGFPQLREFVLENL 563

Query: 553 LSLKKMPSIEEGGMPCLKSAFLEKCPNL 636
             L++  S+EEG MPCL+S  + KCP L
Sbjct: 564 YELEEWKSLEEGSMPCLESLDIIKCPKL 591


>gb|ADE76664.1| unknown [Picea sitchensis]
          Length = 290

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 5/160 (3%)
 Frame = +1

Query: 178 DQQTADAISRNALSALKKLR-RLTLFNVSKGAAILELDDNMPEVLKDLHYLSMDRFKLPK 354
           D Q  D  +   ++ ++ L  R   F++ K    L L  +M E ++ L  + +    +PK
Sbjct: 77  DYQLEDEGTFRGMTKMRTLYVRYVHFDIFKSEG-LHLPTDM-EAMERLEIVHLICCVVPK 134

Query: 355 SISHFRQLQELILFSTHVEDYGDL-GLERLPCLAYLSISYGKCE---EFPESFGKAGAFP 522
            I   + L EL L   +     D  GLE++P L  L + + +     EFP  FG+AGAF 
Sbjct: 135 WIFQLQNLMELTLHGMYNASSADFRGLEKIPNLKKLLLGWNQNPDFIEFPNEFGEAGAFL 194

Query: 523 RLVELKLSDFLSLKKMPSIEEGGMPCLKSAFLEKCPNLRD 642
           +L EL +  F  LK +PS  E  MP L+   + +C  L +
Sbjct: 195 KLEELVIHYFKHLKSIPSFHEDAMPRLRCLKITECQPLEN 234


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