BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004562
         (1578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006306329.1| hypothetical protein CARUB_v10012204mg, part...    58   1e-05

>ref|XP_006306329.1| hypothetical protein CARUB_v10012204mg, partial [Capsella rubella]
            gi|482575040|gb|EOA39227.1| hypothetical protein
            CARUB_v10012204mg, partial [Capsella rubella]
          Length = 375

 Score = 58.2 bits (139), Expect = 1e-05
 Identities = 79/307 (25%), Positives = 118/307 (38%), Gaps = 4/307 (1%)
 Frame = -3

Query: 1411 DLLLKILTLTRSYKTAIRCSTLSKRWKGLHKGLPCLYIHEGDLYDTDEDEDVKTQIQDHY 1232
            D++L+ +      K AI+ S LSKRW+ +   +P LY  +  L  TDED   KT +  H 
Sbjct: 51   DVILQHILCFIPTKFAIKTSLLSKRWRHVWCDVPSLYFEQYKL--TDEDSIDKT-LSYHT 107

Query: 1231 IPKMLARDNQKIQTFYIEISYMSKLVFQKCVKALVTDHKVENLSLRSPDAVC-LPRSTFG 1055
             PKML   N  ++T    I    K    +          VENLSL   +  C +P   F 
Sbjct: 108  APKML---NFHLRTRTGRIDKWIKFAISR---------NVENLSLEVGNHECPIPDFFFI 155

Query: 1054 CQSLVTIKMGPLSLDNTPRDPLGFPKLRSCDLAVDIDKRLDMQKLNCLIRGCPXXXXXXX 875
              S+  +K      D TP+D + +  LR   L      R+  + +  ++ GCP       
Sbjct: 156  NTSVKQLKFNLSFTDLTPKDFVVWTSLRKLHLG---SCRVSDESIAKILSGCPVLESLTL 212

Query: 874  XXXLMGKCPEPLVISSPKLTNLDFGFWFEKEININDMALKIHIDAPELLTMRFYSWDGRK 695
                   C +P V+               K + +  + +  HI  P           G  
Sbjct: 213  YF-----CDQPTVLD------------LSKSLGLTKLDVDRHILVP-----------GPT 244

Query: 694  YTVEAHVQAPKLIEFV--CGPVDKGILSNVRSFKALKFIH-LVEIDVRPVDICMMFAALP 524
              +  HV   KL   +  C  VD   L+  +      ++H +V  DV  V +  M   L 
Sbjct: 245  QIIAPHVHTLKLRNSLLPCTLVDVSSLTEAKMDICFHYVHRMVTADVLQVMVLKMLEKLQ 304

Query: 523  LLEKLAF 503
              EKL F
Sbjct: 305  NTEKLTF 311