BLASTX nr result

ID: Ephedra26_contig00004487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004487
         (519 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                              65   7e-09

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 29/200 (14%)
 Frame = +3

Query: 3   KWESIYKFKEQCFLLLGNMIHIANLLLGIESR---KIEMGDSLILKLSRRSMNCIMDGFW 173
           ++E +   +++CF +L  MI +A ++  I+ R   +  M D +     + +   I++G  
Sbjct: 180 RFEDVSDNQDECFHVLKEMIFLAKVVKQIKERPQLQQRMHDEV-----KDATELIVEGSI 234

Query: 174 LCCSAMGA-----FSSYKREEEHFYEVTKNM----AKLQLQLTT-------CKTIN---- 293
            CCS M +     F S    +E   EV + +      + +Q+         CK  N    
Sbjct: 235 KCCSQMASSQFSNFFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSRR 294

Query: 294 --KNSLKLEQ----VTDLLELEADTNALAVVLQGYGGLGKTTLADAVFSNVFVDTEEFLC 455
             ++++ LE+    V DLLE  +  NA+AV+L G+GG+GKTTLADAVFS   VD +E   
Sbjct: 295 YPEHAVGLEESSREVIDLLEWGSQQNAVAVILHGFGGMGKTTLADAVFS--MVDIKECQY 352

Query: 456 SKVEXXXXXXXXXXXXELQE 515
           S V+            ELQ+
Sbjct: 353 STVQLFENIDSFPKIIELQK 372


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