BLASTX nr result

ID: Ephedra26_contig00004425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004425
         (636 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28096.3| unnamed protein product [Vitis vinifera]               57   5e-06
ref|XP_002281270.1| PREDICTED: coatomer subunit beta'-1-like [Vi...    57   5e-06
gb|EMT25162.1| Coatomer subunit beta'-2 [Aegilops tauschii]            56   8e-06
gb|EMS65587.1| Coatomer subunit beta'-2 [Triticum urartu]              56   8e-06

>emb|CBI28096.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -1

Query: 111 DVYFKSTNYYRGVNCVDYYTGGDKPFLITGSNDQTTK 1
           D  F   ++ +GVNCVDY+TGGDKP+LITGS+DQT K
Sbjct: 178 DPNFTLDDHMKGVNCVDYFTGGDKPYLITGSDDQTAK 214


>ref|XP_002281270.1| PREDICTED: coatomer subunit beta'-1-like [Vitis vinifera]
          Length = 934

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -1

Query: 111 DVYFKSTNYYRGVNCVDYYTGGDKPFLITGSNDQTTK 1
           D  F   ++ +GVNCVDY+TGGDKP+LITGS+DQT K
Sbjct: 204 DPNFTLDDHMKGVNCVDYFTGGDKPYLITGSDDQTAK 240


>gb|EMT25162.1| Coatomer subunit beta'-2 [Aegilops tauschii]
          Length = 823

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -1

Query: 111 DVYFKSTNYYRGVNCVDYYTGGDKPFLITGSNDQTTK 1
           D  F    + +GVNCVDY+TGGD+PFLITGS+DQT K
Sbjct: 193 DPNFTLDGHSKGVNCVDYFTGGDRPFLITGSDDQTAK 229


>gb|EMS65587.1| Coatomer subunit beta'-2 [Triticum urartu]
          Length = 835

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -1

Query: 111 DVYFKSTNYYRGVNCVDYYTGGDKPFLITGSNDQTTK 1
           D  F    + +GVNCVDY+TGGD+PFLITGS+DQT K
Sbjct: 227 DPNFTLDGHSKGVNCVDYFTGGDRPFLITGSDDQTAK 263


Top