BLASTX nr result
ID: Ephedra26_contig00004421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00004421
(1068 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS64223.1| hypothetical protein M569_10558, partial [Genlise... 60 1e-06
ref|XP_002513525.1| nucleic acid binding protein, putative [Rici... 60 1e-06
ref|XP_006482954.1| PREDICTED: zinc finger CCCH domain-containin... 60 2e-06
ref|XP_006438916.1| hypothetical protein CICLE_v10030728mg [Citr... 60 2e-06
ref|XP_006438914.1| hypothetical protein CICLE_v10030728mg [Citr... 60 2e-06
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 60 2e-06
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 60 2e-06
ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containin... 59 3e-06
ref|XP_002320513.1| RNA recognition motif-containing family prot... 59 4e-06
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 58 6e-06
>gb|EPS64223.1| hypothetical protein M569_10558, partial [Genlisea aurea]
Length = 525
Score = 60.5 bits (145), Expect = 1e-06
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKHVSVTSSLDLKEYDHLHLGPR-LFDSSDIIRR* 179
+RVLVKPYKEKGK+ E+K ++ + + S LD +++ L GPR LF + +++ R
Sbjct: 418 SRVLVKPYKEKGKIQEKK-QQQLQMERDALSPSGLDSRDHIDLPFGPRILFSTQEMMLRR 476
Query: 180 FIDQE----HALELERKRLSDLNFIDSQKRHGH 266
++QE H +EL+ +R+ +L+ D + +H H
Sbjct: 477 KLEQEAELQHVIELQGRRMMNLHLSDLKNQHIH 509
>ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223547433|gb|EEF48928.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 700
Score = 60.1 bits (144), Expect = 1e-06
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKH-----VSVTSSLDLKEYDHLHLGPRLFDSSD- 164
+RVLVKPYKEKGK+ ++K + +Q + S S LD +E LHLG R+F ++
Sbjct: 434 SRVLVKPYKEKGKVPDKKQPHQQQQMERGDYSACSSPSGLDSREPFDLHLGARMFQNTQE 493
Query: 165 -IIRR*FIDQ---EHALELERKRLSDLNFIDSQKRHGH 266
++RR +Q + A+EL+ +RL +L +D K H H
Sbjct: 494 MLLRRKLEEQAELQQAIELQGRRLMNLQLLDF-KNHNH 530
>ref|XP_006482954.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Citrus sinensis]
Length = 713
Score = 59.7 bits (143), Expect = 2e-06
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKH--VSVTSSLDLKEYDHLHLGPRLF--DSSDII 170
ARVLVKPYKEKGK+ ++K ++ E+ + + LD ++ L LG R+F ++ D++
Sbjct: 440 ARVLVKPYKEKGKVPDKKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDML 499
Query: 171 RR*FI----DQEHALELERKRLSDLNFIDSQKRHGH 266
R + D + ALEL+ +RL L +D +K H H
Sbjct: 500 WRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHH 535
>ref|XP_006438916.1| hypothetical protein CICLE_v10030728mg [Citrus clementina]
gi|557541112|gb|ESR52156.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
Length = 807
Score = 59.7 bits (143), Expect = 2e-06
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKH--VSVTSSLDLKEYDHLHLGPRLF--DSSDII 170
ARVLVKPYKEKGK+ ++K ++ E+ + + LD ++ L LG R+F ++ D++
Sbjct: 440 ARVLVKPYKEKGKVPDKKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDML 499
Query: 171 RR*FI----DQEHALELERKRLSDLNFIDSQKRHGH 266
R + D + ALEL+ +RL L +D +K H H
Sbjct: 500 WRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHH 535
>ref|XP_006438914.1| hypothetical protein CICLE_v10030728mg [Citrus clementina]
gi|557541110|gb|ESR52154.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
Length = 690
Score = 59.7 bits (143), Expect = 2e-06
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKH--VSVTSSLDLKEYDHLHLGPRLF--DSSDII 170
ARVLVKPYKEKGK+ ++K ++ E+ + + LD ++ L LG R+F ++ D++
Sbjct: 440 ARVLVKPYKEKGKVPDKKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDML 499
Query: 171 RR*FI----DQEHALELERKRLSDLNFIDSQKRHGH 266
R + D + ALEL+ +RL L +D +K H H
Sbjct: 500 WRRKMEEQADLQQALELQSRRLMGLQLLDVKKHHHH 535
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 59.7 bits (143), Expect = 2e-06
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKHVSVTSSLDLK-EYDHLHLGPRLFDSSDIIRR* 179
ARVLVKPY+EK +L +RK EK + + S LD++ EY + P ++D + +IR+
Sbjct: 415 ARVLVKPYREKSRLVDRKYPEKIDHPVYYS-PHFLDMEPEYQSV---PGIWDDARLIRKQ 470
Query: 180 F-IDQEHALELERKRLSDLNFIDSQKRHGHF 269
+QEHA+ELER+RLS+ H +F
Sbjct: 471 LREEQEHAIELERRRLSEFQMASKPLSHNYF 501
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 59.7 bits (143), Expect = 2e-06
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKHVSVTSSLDLKEYDHLHLGPRLFDSSDIIRR*F 182
ARVLVKPY+EK +L +RK SEK + H +S + H PR+ +++ +R+ F
Sbjct: 401 ARVLVKPYREKSRLVDRKFSEKMQ---HAMCYNSHFIDADSEFHSMPRVCENARFLRKQF 457
Query: 183 IDQ-EHALELERKRLSDLNFIDSQKRHGHF 269
+++ E ALELER+RLS+++ H HF
Sbjct: 458 MEENEQALELERRRLSEMHLAAKPLSH-HF 486
>ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 556
Score = 59.3 bits (142), Expect = 3e-06
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKHVSVTSSLDLKEYDHLHLGPRLFDSSDIIRR*F 182
ARVLVKPY+EK KLAERK E+ E + H S S D++ H R +++S +R+
Sbjct: 396 ARVLVKPYREKSKLAERKYQERMEPADHYSPHFS-DME--PEFHSMSRCYNNSRWLRKKL 452
Query: 183 I-DQEHALELERKRLSDLNF 239
+ +QE ALELER RL+ L+F
Sbjct: 453 LEEQEIALELERSRLAQLHF 472
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 58.5 bits (140), Expect = 4e-06
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKHVSVTSSLDLKEYDHLHLGPRLFDSSDIIRR*F 182
ARVLVKPY+EK +L +RK +EK + H S + LH PR+ D+S ++R+
Sbjct: 392 ARVLVKPYREKSRLVDRKYAEKIQ---HPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQL 448
Query: 183 IDQ-EHALELERKRLSDLNF----IDSQKRHGH 266
+++ E ALELER+RLS+ + HGH
Sbjct: 449 MEEHEQALELERRRLSEFQLAPKPLARHAYHGH 481
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 58.2 bits (139), Expect = 6e-06
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 ARVLVKPYKEKGKLAERKNSEKAEQSKHVSVTSSLDLKEYDHLHLGPRLFDSSDIIRR*F 182
ARVLVKPY+EK +L +RK SEK + H SS + LH P + D+S ++R+
Sbjct: 418 ARVLVKPYREKSRLIDRKFSEKLQ---HPMYNSSHFIDGDSELHPMPTISDNSRLLRKQL 474
Query: 183 IDQ-EHALELERKRLSDLNFIDSQKRH 260
+++ EHALE ER+RL + + H
Sbjct: 475 MEENEHALEFERRRLLEFHLGPKSLNH 501