BLASTX nr result
ID: Ephedra26_contig00004350
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00004350
(675 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela... 251 2e-83
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela... 251 1e-81
ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [A... 249 4e-81
ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Popu... 248 6e-79
gb|EMJ15038.1| hypothetical protein PRUPE_ppa006486mg [Prunus pe... 245 1e-78
gb|EXB82788.1| Splicing factor U2af large subunit B [Morus notab... 241 1e-78
ref|XP_001766902.1| predicted protein [Physcomitrella patens] gi... 251 1e-78
ref|XP_004251659.1| PREDICTED: splicing factor U2af large subuni... 241 5e-78
ref|XP_006353517.1| PREDICTED: splicing factor U2af large subuni... 241 5e-78
ref|XP_006353520.1| PREDICTED: splicing factor U2af large subuni... 241 5e-78
ref|XP_006353521.1| PREDICTED: splicing factor U2af large subuni... 241 5e-78
ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Popu... 244 4e-77
ref|XP_006467824.1| PREDICTED: splicing factor U2af large subuni... 245 4e-77
ref|XP_006449310.1| hypothetical protein CICLE_v10014912mg [Citr... 245 4e-77
ref|XP_006449309.1| hypothetical protein CICLE_v10014912mg [Citr... 245 4e-77
ref|XP_006449311.1| hypothetical protein CICLE_v10014912mg [Citr... 245 4e-77
gb|EMT26945.1| Splicing factor U2af large subunit A [Aegilops ta... 245 5e-77
gb|EMS52811.1| Splicing factor U2af large subunit A [Triticum ur... 245 5e-77
ref|XP_002327819.1| predicted protein [Populus trichocarpa] 244 9e-77
sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large... 246 2e-76
>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein
SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 251 bits (642), Expect(2) = 2e-83
Identities = 120/138 (86%), Positives = 130/138 (94%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYIN EKKFAFVEMRTVEEASNAMALDGI+FEGVSVRVRRP+DYNPS+AATLGPSQPSP
Sbjct: 103 NVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSP 162
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
+LNL+AVGLTPGA G A GPDR+FVGGLPYYLTE Q+KELLESFGPLRGFD V+DR+TGN
Sbjct: 163 HLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGN 222
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTD+A
Sbjct: 223 SKGYGFCVYQDPAVTDVA 240
Score = 84.7 bits (208), Expect(2) = 2e-83
Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGS-----LIPGSTSPM---ENPTKVLCLTEVVS 580
+GQ KP+Q N K+AL G+ ++PG + M E PTKV+CL +VVS
Sbjct: 265 SGQPKPDQANVLAQAQQQIALQKLALQGAPYYNMMMPGVDNGMTMPETPTKVVCLKQVVS 324
Query: 581 PDELKDDEEYQDIVEDIREECAKYGNIANL 670
PDELK+D+EY++I+ED+REEC KYG++A L
Sbjct: 325 PDELKEDDEYEEILEDMREECGKYGSVATL 354
>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein
SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 251 bits (642), Expect(2) = 1e-81
Identities = 120/138 (86%), Positives = 130/138 (94%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYIN EKKFAFVEMRTVEEASNAMALDGI+FEGVSVRVRRP+DYNPS+AATLGPSQPSP
Sbjct: 103 NVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSP 162
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
+LNL+AVGLTPGA G A GPDR+FVGGLPYYLTE Q+KELLESFGPLRGFD V+DR+TGN
Sbjct: 163 HLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGN 222
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTD+A
Sbjct: 223 SKGYGFCVYQDPAVTDVA 240
Score = 79.0 bits (193), Expect(2) = 1e-81
Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGS-----LIPGSTSPM---ENPTKVLCLTEVVS 580
+GQ KP+Q N ++AL G+ ++PG + M E PTKV+CL +VVS
Sbjct: 265 SGQPKPDQANVLAQAQQQIAL-QLALQGAPYYNMMMPGVDNGMTMPETPTKVVCLKQVVS 323
Query: 581 PDELKDDEEYQDIVEDIREECAKYGNIANL 670
PDELK+D+EY++I+ED+REEC KYG++A L
Sbjct: 324 PDELKEDDEYEEILEDMREECGKYGSVATL 353
>ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [Amborella trichopoda]
gi|548832419|gb|ERM95215.1| hypothetical protein
AMTR_s00009p00267190 [Amborella trichopoda]
Length = 491
Score = 249 bits (637), Expect(2) = 4e-81
Identities = 120/138 (86%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMRTVEEASNAMALDGI FEGVSVRVRRPTDYNPSLAA LGPSQPSP
Sbjct: 183 NVYINHEKKFAFVEMRTVEEASNAMALDGITFEGVSVRVRRPTDYNPSLAAALGPSQPSP 242
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
+L L+AVGL PGAIG A GPDR+FVGGLPYY TE Q++ELLESFGPLRGFD V+DR+TGN
Sbjct: 243 HLTLAAVGLIPGAIGGAEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRDTGN 302
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTDIA
Sbjct: 303 SKGYGFCVYQDPAVTDIA 320
Score = 79.0 bits (193), Expect(2) = 4e-81
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALT--GSLIPG-STSPMENPTKVLCLTEVVSPDELK 595
TGQ KP+QE K+ L G+ +PG + + ENPTKVLCLTEVVS DEL+
Sbjct: 343 TGQAKPDQEIILAQAQQHIALQKLVLQAGGAAVPGVAVTVSENPTKVLCLTEVVSADELQ 402
Query: 596 DDEEYQDIVEDIREECAKYGNIANL 670
DDEEY++I+ED+REE K+G + +
Sbjct: 403 DDEEYEEILEDMREEGRKFGPLTTV 427
>ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Populus trichocarpa]
gi|550340286|gb|EEE85659.2| hypothetical protein
POPTR_0004s04100g [Populus trichocarpa]
Length = 545
Score = 248 bits (634), Expect(2) = 6e-79
Identities = 120/138 (86%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRPTDYNPSLAATLGPSQPSP
Sbjct: 236 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPSLAATLGPSQPSP 295
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
LNL+AVGL PG I A GPDRVFVGGLPYY TE Q++ELLESFGPLRGFD V+DR+TGN
Sbjct: 296 LLNLAAVGLVPGTISGAEGPDRVFVGGLPYYFTEIQIRELLESFGPLRGFDLVKDRDTGN 355
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTDIA
Sbjct: 356 SKGYGFCVYQDPAVTDIA 373
Score = 72.8 bits (177), Expect(2) = 6e-79
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Frame = +2
Query: 428 GQTKPEQENXXXXXXXXXXXXKMALTGSL--IPGSTSPMEN----PTKVLCLTEVVSPDE 589
GQ+K EQEN KMAL + +PG P+ P+KVLCLTE ++ +
Sbjct: 397 GQSKSEQENILAQAQQHIAIQKMALQAGVMNLPGVGIPLAESAYTPSKVLCLTEAITMEV 456
Query: 590 LKDDEEYQDIVEDIREECAKYGNIANL 670
L DDEEY++I+ED+REEC K+G + N+
Sbjct: 457 LADDEEYEEILEDMREECCKFGTLINV 483
>gb|EMJ15038.1| hypothetical protein PRUPE_ppa006486mg [Prunus persica]
Length = 409
Score = 245 bits (626), Expect(2) = 1e-78
Identities = 116/138 (84%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRPTDYNP+LAA LGPSQPSP
Sbjct: 100 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPSQPSP 159
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
LNL AVGLT GA+G A GPDR+FVGGLPYY TE Q++ELL+SFGPLRGFD V+D++TGN
Sbjct: 160 LLNLGAVGLTQGAVGGAEGPDRIFVGGLPYYFTEAQIRELLQSFGPLRGFDLVKDKDTGN 219
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTDIA
Sbjct: 220 SKGYGFCVYQDPAVTDIA 237
Score = 75.1 bits (183), Expect(2) = 1e-78
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Frame = +2
Query: 428 GQTKPEQENXXXXXXXXXXXXKMALTG---SLIPGSTSPM---ENPTKVLCLTEVVSPDE 589
GQ+K EQEN KMAL +L+ G + M E PTKVLCLTE ++ D+
Sbjct: 261 GQSKSEQENILVQAQQHIAMQKMALQVVDLNLLGGGMATMASGETPTKVLCLTEAITADQ 320
Query: 590 LKDDEEYQDIVEDIREECAKYGNIANL 670
L DDEEY +I+ED+R+EC+K+G + N+
Sbjct: 321 LGDDEEYVEILEDMRDECSKFGTLVNV 347
>gb|EXB82788.1| Splicing factor U2af large subunit B [Morus notabilis]
Length = 530
Score = 241 bits (616), Expect(2) = 1e-78
Identities = 118/151 (78%), Positives = 130/151 (86%), Gaps = 13/151 (8%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFE-------------GVSVRVRRPTDYNP 141
NVYINHEKKFAFVEMRTVEEASNAMALDGI+FE GV+VRVRRPTDYNP
Sbjct: 208 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEASNLILISSSLLCGVAVRVRRPTDYNP 267
Query: 142 SLAATLGPSQPSPNLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPL 321
+LAATLGPSQPSP+LNL+A GLTPGAI A GP+R+FVGGLPYY TEPQ++ELLESFGPL
Sbjct: 268 ALAATLGPSQPSPHLNLAAAGLTPGAITGAEGPERIFVGGLPYYFTEPQIRELLESFGPL 327
Query: 322 RGFDFVRDRETGNSKGYAFCVYQDPNVTDIA 414
RGFD V+D++TGNSKGY FCVYQDP VTDIA
Sbjct: 328 RGFDLVKDKDTGNSKGYGFCVYQDPAVTDIA 358
Score = 78.6 bits (192), Expect(2) = 1e-78
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Frame = +2
Query: 428 GQTKPEQENXXXXXXXXXXXXKMALT--GSLIPG-STSPMEN---PTKVLCLTEVVSPDE 589
GQ+K EQEN KMAL G +P + +EN PTK+LCLTE +S D+
Sbjct: 382 GQSKSEQENILAQAQQHIAIQKMALHAGGVKLPEIGMTLVENVGIPTKILCLTEAISSDQ 441
Query: 590 LKDDEEYQDIVEDIREECAKYGNIANL 670
LKDDEEY++IVED+REEC K+G++ N+
Sbjct: 442 LKDDEEYEEIVEDMREECGKFGSVVNV 468
>ref|XP_001766902.1| predicted protein [Physcomitrella patens]
gi|162681881|gb|EDQ68304.1| predicted protein
[Physcomitrella patens]
Length = 486
Score = 251 bits (641), Expect(2) = 1e-78
Identities = 120/138 (86%), Positives = 130/138 (94%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYIN EKKFAFVEMRTVEEASNAMALDGI+FEGVSVRVRRP+DYNPS+AATLGPSQPSP
Sbjct: 197 NVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPSP 256
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
+LNL+AVGLTPGA G A GPDR+FVGGLPYYLTE Q+KELLESFGPLRGFD V+DR+TGN
Sbjct: 257 HLNLAAVGLTPGAAGGADGPDRIFVGGLPYYLTEVQIKELLESFGPLRGFDLVKDRDTGN 316
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP+V DIA
Sbjct: 317 SKGYGFCVYQDPSVVDIA 334
Score = 68.9 bits (167), Expect(2) = 1e-78
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
+GQ KP+Q N K+AL + PTKV+ LTEVV+P++L+DDE
Sbjct: 356 SGQPKPDQANVLAHAQQQIAIQKLALQA----------KTPTKVVALTEVVTPNQLEDDE 405
Query: 605 EYQDIVEDIREECAKYGNIAN 667
EYQ+I+ED+ EC KYG + N
Sbjct: 406 EYQEIMEDMGTECGKYGTLVN 426
>ref|XP_004251659.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
lycopersicum]
Length = 607
Score = 241 bits (614), Expect(2) = 5e-78
Identities = 113/138 (81%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNPSLAATLGPSQP+P
Sbjct: 313 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAATLGPSQPNP 372
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL+PG+ G GPDR+FVGGLPYY TE Q++ELLESFGPLRGF+ V+D+ETGN
Sbjct: 373 NLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNLVKDKETGN 432
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVY D +VTDIA
Sbjct: 433 SKGYAFCVYADVSVTDIA 450
Score = 77.4 bits (189), Expect(2) = 5e-78
Identities = 43/82 (52%), Positives = 50/82 (60%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q KPEQE ++ L PG PTKVLCLT VVSPDELKDDE
Sbjct: 473 TLQPKPEQEIVLMHAQQQIALQRLMLQ----PGGP-----PTKVLCLTHVVSPDELKDDE 523
Query: 605 EYQDIVEDIREECAKYGNIANL 670
+Y+DIVED+R EC K+GN+ NL
Sbjct: 524 DYEDIVEDMRMECGKFGNLVNL 545
>ref|XP_006353517.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Solanum tuberosum] gi|565373928|ref|XP_006353518.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X2 [Solanum tuberosum]
gi|565373930|ref|XP_006353519.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X3 [Solanum
tuberosum]
Length = 605
Score = 241 bits (614), Expect(2) = 5e-78
Identities = 113/138 (81%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNPSLAATLGPSQP+P
Sbjct: 311 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAATLGPSQPNP 370
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL+PG+ G GPDR+FVGGLPYY TE Q++ELLESFGPLRGF+ V+D+ETGN
Sbjct: 371 NLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNLVKDKETGN 430
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVY D +VTDIA
Sbjct: 431 SKGYAFCVYADVSVTDIA 448
Score = 77.4 bits (189), Expect(2) = 5e-78
Identities = 43/82 (52%), Positives = 50/82 (60%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q KPEQE ++ L PG PTKVLCLT VVSPDELKDDE
Sbjct: 471 TLQPKPEQEIVLMHAQQQIALQRLMLQ----PGGP-----PTKVLCLTHVVSPDELKDDE 521
Query: 605 EYQDIVEDIREECAKYGNIANL 670
+Y+DIVED+R EC K+GN+ NL
Sbjct: 522 DYEDIVEDMRMECGKFGNLVNL 543
>ref|XP_006353520.1| PREDICTED: splicing factor U2af large subunit B-like isoform X4
[Solanum tuberosum]
Length = 602
Score = 241 bits (614), Expect(2) = 5e-78
Identities = 113/138 (81%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNPSLAATLGPSQP+P
Sbjct: 308 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAATLGPSQPNP 367
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL+PG+ G GPDR+FVGGLPYY TE Q++ELLESFGPLRGF+ V+D+ETGN
Sbjct: 368 NLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNLVKDKETGN 427
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVY D +VTDIA
Sbjct: 428 SKGYAFCVYADVSVTDIA 445
Score = 77.4 bits (189), Expect(2) = 5e-78
Identities = 43/82 (52%), Positives = 50/82 (60%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q KPEQE ++ L PG PTKVLCLT VVSPDELKDDE
Sbjct: 468 TLQPKPEQEIVLMHAQQQIALQRLMLQ----PGGP-----PTKVLCLTHVVSPDELKDDE 518
Query: 605 EYQDIVEDIREECAKYGNIANL 670
+Y+DIVED+R EC K+GN+ NL
Sbjct: 519 DYEDIVEDMRMECGKFGNLVNL 540
>ref|XP_006353521.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
[Solanum tuberosum] gi|565373936|ref|XP_006353522.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X6 [Solanum tuberosum]
Length = 367
Score = 241 bits (614), Expect(2) = 5e-78
Identities = 113/138 (81%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNPSLAATLGPSQP+P
Sbjct: 73 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAATLGPSQPNP 132
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL+PG+ G GPDR+FVGGLPYY TE Q++ELLESFGPLRGF+ V+D+ETGN
Sbjct: 133 NLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNLVKDKETGN 192
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVY D +VTDIA
Sbjct: 193 SKGYAFCVYADVSVTDIA 210
Score = 77.4 bits (189), Expect(2) = 5e-78
Identities = 43/82 (52%), Positives = 50/82 (60%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q KPEQE ++ L PG PTKVLCLT VVSPDELKDDE
Sbjct: 233 TLQPKPEQEIVLMHAQQQIALQRLMLQ----PGGP-----PTKVLCLTHVVSPDELKDDE 283
Query: 605 EYQDIVEDIREECAKYGNIANL 670
+Y+DIVED+R EC K+GN+ NL
Sbjct: 284 DYEDIVEDMRMECGKFGNLVNL 305
>ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Populus trichocarpa]
gi|550338812|gb|ERP61027.1| hypothetical protein
POPTR_0005s12700g [Populus trichocarpa]
Length = 588
Score = 244 bits (624), Expect(2) = 4e-77
Identities = 116/138 (84%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMR+VEEASNAMALDGI+FEG V+VRRP+DYNPSLAATLGPSQP+P
Sbjct: 290 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 349
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNLSAVGL PG+ G GPDR+FVGGLPYY TE Q++ELLESFGPLRGFD V+DRETGN
Sbjct: 350 NLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGN 409
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVYQD +VTDIA
Sbjct: 410 SKGYAFCVYQDLSVTDIA 427
Score = 70.5 bits (171), Expect(2) = 4e-77
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q KPEQEN ++AL ++ PTKV+CLT+VV+ DELKDD+
Sbjct: 450 TNQPKPEQENVLLHAQQ-----QIALQRLMLQPQPQQQPVPTKVVCLTQVVTGDELKDDD 504
Query: 605 EYQDIVEDIREECAKYGNIANL 670
EY+DI+ED+R E K+G + N+
Sbjct: 505 EYEDILEDMRTEAGKFGQLVNV 526
>ref|XP_006467824.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
[Citrus sinensis]
Length = 522
Score = 245 bits (625), Expect(2) = 4e-77
Identities = 118/138 (85%), Positives = 125/138 (90%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRPTDYNP+LAA LGP QPSP
Sbjct: 215 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 274
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL GAIG A GPDRVFVGGLPYY TE Q+KELLESFG L GFD V+DR+TGN
Sbjct: 275 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 334
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTDIA
Sbjct: 335 SKGYGFCVYQDPAVTDIA 352
Score = 70.1 bits (170), Expect(2) = 4e-77
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGS----LIPGSTSPMENPTKVLCLTEVVSPDEL 592
+GQ+K EQE+ KMAL S L G + E KVLCLTE ++ D L
Sbjct: 375 SGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADAL 434
Query: 593 KDDEEYQDIVEDIREECAKYGNIANL 670
DDEEY++I+ED+REEC KYG + N+
Sbjct: 435 ADDEEYEEILEDMREECGKYGTLVNV 460
>ref|XP_006449310.1| hypothetical protein CICLE_v10014912mg [Citrus clementina]
gi|557551921|gb|ESR62550.1| hypothetical protein
CICLE_v10014912mg [Citrus clementina]
Length = 522
Score = 245 bits (625), Expect(2) = 4e-77
Identities = 118/138 (85%), Positives = 125/138 (90%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRPTDYNP+LAA LGP QPSP
Sbjct: 215 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 274
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL GAIG A GPDRVFVGGLPYY TE Q+KELLESFG L GFD V+DR+TGN
Sbjct: 275 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 334
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTDIA
Sbjct: 335 SKGYGFCVYQDPAVTDIA 352
Score = 70.1 bits (170), Expect(2) = 4e-77
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGS----LIPGSTSPMENPTKVLCLTEVVSPDEL 592
+GQ+K EQE+ KMAL S L G + E KVLCLTE ++ D L
Sbjct: 375 SGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADAL 434
Query: 593 KDDEEYQDIVEDIREECAKYGNIANL 670
DDEEY++I+ED+REEC KYG + N+
Sbjct: 435 ADDEEYEEILEDMREECGKYGTLVNV 460
>ref|XP_006449309.1| hypothetical protein CICLE_v10014912mg [Citrus clementina]
gi|557551920|gb|ESR62549.1| hypothetical protein
CICLE_v10014912mg [Citrus clementina]
Length = 521
Score = 245 bits (625), Expect(2) = 4e-77
Identities = 118/138 (85%), Positives = 125/138 (90%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRPTDYNP+LAA LGP QPSP
Sbjct: 215 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 274
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL GAIG A GPDRVFVGGLPYY TE Q+KELLESFG L GFD V+DR+TGN
Sbjct: 275 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 334
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTDIA
Sbjct: 335 SKGYGFCVYQDPAVTDIA 352
Score = 70.1 bits (170), Expect(2) = 4e-77
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGS----LIPGSTSPMENPTKVLCLTEVVSPDEL 592
+GQ+K EQE+ KMAL S L G + E KVLCLTE ++ D L
Sbjct: 374 SGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADAL 433
Query: 593 KDDEEYQDIVEDIREECAKYGNIANL 670
DDEEY++I+ED+REEC KYG + N+
Sbjct: 434 ADDEEYEEILEDMREECGKYGTLVNV 459
>ref|XP_006449311.1| hypothetical protein CICLE_v10014912mg [Citrus clementina]
gi|557551922|gb|ESR62551.1| hypothetical protein
CICLE_v10014912mg [Citrus clementina]
Length = 520
Score = 245 bits (625), Expect(2) = 4e-77
Identities = 118/138 (85%), Positives = 125/138 (90%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMRTVEEASNAMALDGI+FEGV+VRVRRPTDYNP+LAA LGP QPSP
Sbjct: 215 NVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSP 274
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGL GAIG A GPDRVFVGGLPYY TE Q+KELLESFG L GFD V+DR+TGN
Sbjct: 275 NLNLAAVGLASGAIGGAEGPDRVFVGGLPYYFTETQIKELLESFGTLHGFDLVKDRDTGN 334
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGY FCVYQDP VTDIA
Sbjct: 335 SKGYGFCVYQDPAVTDIA 352
Score = 70.1 bits (170), Expect(2) = 4e-77
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGS----LIPGSTSPMENPTKVLCLTEVVSPDEL 592
+GQ+K EQE+ KMAL S L G + E KVLCLTE ++ D L
Sbjct: 375 SGQSKTEQESILAQAQQHIAIQKMALQTSGMNTLGGGMSLFGETLAKVLCLTEAITADAL 434
Query: 593 KDDEEYQDIVEDIREECAKYGNIANL 670
DDEEY++I+ED+REEC KYG + N+
Sbjct: 435 ADDEEYEEILEDMREECGKYGTLVNV 460
>gb|EMT26945.1| Splicing factor U2af large subunit A [Aegilops tauschii]
Length = 663
Score = 245 bits (625), Expect(2) = 5e-77
Identities = 117/138 (84%), Positives = 126/138 (91%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNPSLAA LGPSQP+P
Sbjct: 368 NVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNP 427
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL AVGLTPG+ G GPDR+FVGGLPYY TE QV+ELLESFGPLRGFD V+DRETGN
Sbjct: 428 NLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 487
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVYQD NVTDIA
Sbjct: 488 SKGYAFCVYQDLNVTDIA 505
Score = 69.7 bits (169), Expect(2) = 5e-77
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q +PEQE K+ L + G+ PTKV+CLT+VVS DEL+DDE
Sbjct: 528 TSQPRPEQETILLHAQQQVQMQKLVLQ---VGGAL-----PTKVVCLTQVVSADELRDDE 579
Query: 605 EYQDIVEDIREECAKYGNI 661
EY+DI+ED+REE KYGN+
Sbjct: 580 EYEDILEDMREEGRKYGNL 598
>gb|EMS52811.1| Splicing factor U2af large subunit A [Triticum urartu]
Length = 588
Score = 245 bits (625), Expect(2) = 5e-77
Identities = 117/138 (84%), Positives = 126/138 (91%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNPSLAA LGPSQP+P
Sbjct: 293 NVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNP 352
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL AVGLTPG+ G GPDR+FVGGLPYY TE QV+ELLESFGPLRGFD V+DRETGN
Sbjct: 353 NLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 412
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVYQD NVTDIA
Sbjct: 413 SKGYAFCVYQDLNVTDIA 430
Score = 69.7 bits (169), Expect(2) = 5e-77
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q +PEQE K+ L + G+ PTKV+CLT+VVS DEL+DDE
Sbjct: 453 TSQPRPEQETILLHAQQQVQMQKLVLQ---VGGAL-----PTKVVCLTQVVSADELRDDE 504
Query: 605 EYQDIVEDIREECAKYGNI 661
EY+DI+ED+REE KYGN+
Sbjct: 505 EYEDILEDMREEGRKYGNL 523
>ref|XP_002327819.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 244 bits (624), Expect(2) = 9e-77
Identities = 116/138 (84%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINHEKKFAFVEMR+VEEASNAMALDGI+FEG V+VRRP+DYNPSLAATLGPSQP+P
Sbjct: 243 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 302
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNLSAVGL PG+ G GPDR+FVGGLPYY TE Q++ELLESFGPLRGFD V+DRETGN
Sbjct: 303 NLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGN 362
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVYQD +VTDIA
Sbjct: 363 SKGYAFCVYQDLSVTDIA 380
Score = 69.3 bits (168), Expect(2) = 9e-77
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +2
Query: 425 TGQTKPEQENXXXXXXXXXXXXKMALTGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDE 604
T Q KPEQEN ++AL ++ PTKV+CLT+VV+ DELKDD+
Sbjct: 403 TNQPKPEQENVLLHAQQ-----QIALQRLMLQPQPQQQPVPTKVVCLTQVVTGDELKDDD 457
Query: 605 EYQDIVEDIREECAKYGNIANL 670
EY+DI+ED+R E K+G + N+
Sbjct: 458 EYEDILEDMRTEAGKFGLLVNV 479
>sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B gi|108864649|gb|ABA95281.2| transposon
protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein
OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 246 bits (629), Expect(2) = 2e-76
Identities = 118/138 (85%), Positives = 127/138 (92%)
Frame = +1
Query: 1 NVYINHEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPSLAATLGPSQPSP 180
NVYINH+KKFAFVEMR+VEEASNAMALDGI+FEG V+VRRPTDYNPSLAA LGPSQPSP
Sbjct: 254 NVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSP 313
Query: 181 NLNLSAVGLTPGAIGSAVGPDRVFVGGLPYYLTEPQVKELLESFGPLRGFDFVRDRETGN 360
NLNL+AVGLTPG+ G GPDR+FVGGLPYY TE QV+ELLESFGPLRGFD V+DRETGN
Sbjct: 314 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 373
Query: 361 SKGYAFCVYQDPNVTDIA 414
SKGYAFCVYQD NVTDIA
Sbjct: 374 SKGYAFCVYQDLNVTDIA 391
Score = 66.6 bits (161), Expect(2) = 2e-76
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 431 QTKPEQENXXXXXXXXXXXXKMAL-TGSLIPGSTSPMENPTKVLCLTEVVSPDELKDDEE 607
Q +PEQE+ K+ G+L PTKV+CLT+VVS DELKDDEE
Sbjct: 416 QPRPEQESILLQAQQQVQLQKLVYQVGAL----------PTKVVCLTQVVSADELKDDEE 465
Query: 608 YQDIVEDIREECAKYGNI 661
Y+DI+ED+R E KYGN+
Sbjct: 466 YEDIMEDMRLEAGKYGNL 483