BLASTX nr result
ID: Ephedra26_contig00004195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00004195
(884 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY08042.1| Poly(A) binding protein 7 [Theobroma cacao] 99 2e-18
gb|EMJ05237.1| hypothetical protein PRUPE_ppa020841mg [Prunus pe... 97 1e-17
ref|XP_004304322.1| PREDICTED: probable polyadenylate-binding pr... 96 1e-17
ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr... 96 2e-17
gb|EXB75946.1| putative polyadenylate-binding protein [Morus not... 93 1e-16
ref|XP_006430351.1| hypothetical protein CICLE_v10011287mg [Citr... 92 3e-16
ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric... 91 6e-16
ref|XP_004494108.1| PREDICTED: probable polyadenylate-binding pr... 91 7e-16
ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding pr... 88 4e-15
ref|XP_003521427.1| PREDICTED: polyadenylate-binding protein 7-l... 88 4e-15
ref|XP_006482368.1| PREDICTED: polyadenylate-binding protein 7-l... 86 1e-14
ref|XP_003554408.1| PREDICTED: polyadenylate-binding protein 7-l... 85 3e-14
ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Sela... 81 6e-13
ref|XP_006338922.1| PREDICTED: polyadenylate-binding protein 7-l... 79 2e-12
ref|XP_004249577.1| PREDICTED: probable polyadenylate-binding pr... 74 6e-11
ref|XP_003625734.1| Polyadenylate binding protein [Medicago trun... 71 5e-10
ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata s... 71 6e-10
ref|XP_004987062.1| PREDICTED: probable polyadenylate-binding pr... 70 8e-10
ref|XP_006393217.1| hypothetical protein EUTSA_v10011289mg [Eutr... 70 1e-09
ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana... 70 1e-09
>gb|EOY08042.1| Poly(A) binding protein 7 [Theobroma cacao]
Length = 637
Score = 99.0 bits (245), Expect = 2e-18
Identities = 86/257 (33%), Positives = 115/257 (44%), Gaps = 6/257 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY---APNHFSPHPQNQGMLFPQMA 176
R+AHLQ YA ++ P+ + VLPG Y Y +P SP P GM++ +
Sbjct: 377 RQAHLQLHYAQRTAGLAGPSTA-----VLPGGYPPLYYTASPGVVSPVPPRPGMMYQPLG 431
Query: 177 VXXXXXXXXXXXXXXXAIQ--RMPMAMGNPR-IRTPRSRMTSPAAPQQGQLMTVLPTPQG 347
+ A Q +PM R R R+RM A Q G
Sbjct: 432 LRAGWRANAFTPPTRPAFQPSSLPMVPSATRQTRQNRARMNGHALLQGGSYSVPQLQQPA 491
Query: 348 VSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEG 527
S + KD + +QQR Q+ KYVPNGR RE V + V P S+++
Sbjct: 492 QSGTTLKDQS-NQQRVGQA-KYVPNGRGRE-VNRGSGVPPA----------ASNSVAAVS 538
Query: 528 KNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTP 707
+ E+LS+ LA A P +K +LGE LYP VQ +P KITG +P
Sbjct: 539 QGSETLSSMLAAASPEQQKTILGERLYPLVQKHQPDLVPKITGMLLEMDNSELLLLLESP 598
Query: 708 DSLSAKVEEAFEVLRSS 758
+SL AKVEEA EVL+ S
Sbjct: 599 ESLGAKVEEAVEVLKLS 615
>gb|EMJ05237.1| hypothetical protein PRUPE_ppa020841mg [Prunus persica]
Length = 632
Score = 96.7 bits (239), Expect = 1e-17
Identities = 79/254 (31%), Positives = 115/254 (45%), Gaps = 3/254 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYT-VYY-APNHFSPH-PQNQGMLFPQMA 176
R+A LQ QYA M ++ P+ + V+PG Y +YY AP+ P P G+++ +
Sbjct: 376 RQAQLQLQYAQRMAGLAGPSTA-----VIPGGYPPIYYQAPSGVVPQVPPRPGLMYQPLG 430
Query: 177 VXXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGVSQ 356
+ Q P+++ + R R RM PQ M P Q +Q
Sbjct: 431 LRPGWRANGFAPTSGPPYQPPPVSVMPRQHRQNRGRMNGHMLPQGSAYM---PHLQQSTQ 487
Query: 357 LSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGKNL 536
LS+ + Q+ KYVPNGR R+ K + + S+++ +
Sbjct: 488 LSHSAKDSNNQQRTGQAKYVPNGRQRDMNKGSGV-----------STIASNSVGGGSQGP 536
Query: 537 ESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPDSL 716
E LS+ LA A P +KQ+LGE LYP V KP A KITG +P+SL
Sbjct: 537 EMLSSMLAAASPEQQKQILGEHLYPLVHKHKPDLASKITGMLLEMDNSELLLLLESPESL 596
Query: 717 SAKVEEAFEVLRSS 758
+AKV EA +VL+ S
Sbjct: 597 AAKVGEAVQVLKIS 610
>ref|XP_004304322.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Fragaria vesca subsp. vesca]
Length = 638
Score = 96.3 bits (238), Expect = 1e-17
Identities = 84/258 (32%), Positives = 122/258 (47%), Gaps = 7/258 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYT-VYY-APNHF-SPHPQNQGMLFPQMA 176
R+A LQ QYA M + P+ +V+PG Y +YY AP+ P P G+++ M
Sbjct: 379 RQAQLQLQYAQRMAGFAGPS-----AAVIPGGYPHIYYQAPSGVVPPGPPRPGIMYQPMG 433
Query: 177 VXXXXXXXXXXXXXXXAIQR--MPMAMGNPR-IRTPRSRMTSPAAPQQGQLMTVLPTPQG 347
+ A Q +P+ PR R R R+ PQ G +P Q
Sbjct: 434 LRPGWRPNGFGPTSGPAFQPPPVPVMSNTPRQYRQNRGRLNGHMLPQGGPF---IPHLQQ 490
Query: 348 VSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEG 527
+QL++ + +QQRP Q KYVPNGR R+ K + ++ S+++
Sbjct: 491 STQLTHSKDSNNQQRPGQP-KYVPNGRQRDMNKGSGV-----------SSTASNSLGGGS 538
Query: 528 KNLESLSTN-LAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXT 704
+ E LS++ LA A P +KQ+LGE L+P V KP A KITG +
Sbjct: 539 QGPEMLSSSMLAAASPEQQKQILGERLFPLVHKHKPDLASKITGMLLEMDNSELLLLLES 598
Query: 705 PDSLSAKVEEAFEVLRSS 758
P+SL+AKV EA +VL+ S
Sbjct: 599 PESLAAKVGEAVQVLKIS 616
>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
product [Vitis vinifera]
Length = 634
Score = 95.5 bits (236), Expect = 2e-17
Identities = 83/256 (32%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYYAPNHFSPHPQNQGMLFPQMAVXX 185
R+A LQ YA M ++ P+ V+PG Y Y P QG+++ + +
Sbjct: 375 RQAQLQLHYAQRMAGLAGPSTP-----VIPGGYPPLYYTAPPGVIPPRQGLMYQPLGLRT 429
Query: 186 XXXXXXXXXXXXXAIQ--RMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTV-LPTPQGVSQ 356
A Q +P+ PR T+ PQ G T +P Q +Q
Sbjct: 430 GWRANNLIPPTRPAFQPSSIPLMPNTPRQHRQNRGRTNGHIPQGGGHSTAFMPHLQQPTQ 489
Query: 357 --LSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGK 530
+S KD+ +QQR Q+ KYVPNGR E K + +P + S+++ +
Sbjct: 490 PVISPKDSI-NQQRAGQA-KYVPNGRSYEMSKGSG--IP---------SAASNSVGTGSQ 536
Query: 531 NLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPD 710
E LS+ LA A P +KQ+LGE LYP VQ KP A KITG +P+
Sbjct: 537 GSEMLSSMLAAASPEQQKQILGEHLYPLVQKQKPDLAAKITGMLLEMDNSELLLLLESPE 596
Query: 711 SLSAKVEEAFEVLRSS 758
SL+AKVEEA +VL+ S
Sbjct: 597 SLAAKVEEAVQVLKLS 612
>gb|EXB75946.1| putative polyadenylate-binding protein [Morus notabilis]
Length = 628
Score = 93.2 bits (230), Expect = 1e-16
Identities = 81/255 (31%), Positives = 118/255 (46%), Gaps = 4/255 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYYAPNHFSPH-PQNQGMLFPQMAVX 182
R+A LQ Q++ MP S ++PG Y+ +Y P PH P G+++ + +
Sbjct: 377 RKAQLQLQHSQRMPT----GPSGPSSPLIPGGYSPFYYPASSVPHVPPRPGLMYQSIGMR 432
Query: 183 XXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMT-VLPTPQGVSQL 359
A Q P+ M N PR P +G++ +LP Q + Q
Sbjct: 433 PDWMANSFAPPTRPAFQPSPVPMPN----APR-----PNRQNRGRVNGHMLPNVQHLQQP 483
Query: 360 SY--KDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGKN 533
+ KD+ HQ R Q+ KY+PNGR RE + + V ++ S++
Sbjct: 484 ANFSKDSINHQ-RAGQT-KYIPNGRQREINRGPSCV----------SSAASNSFGVGSPG 531
Query: 534 LESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPDS 713
E+LS+ LA A P +K +LGE LYP VQ KP+ KITG +PDS
Sbjct: 532 PETLSSMLAAATPGHQKHILGEHLYPLVQKHKPELTAKITGMLLEMDNSELLLLLESPDS 591
Query: 714 LSAKVEEAFEVLRSS 758
L+AKV+EA EVL+ S
Sbjct: 592 LAAKVDEAVEVLKIS 606
>ref|XP_006430351.1| hypothetical protein CICLE_v10011287mg [Citrus clementina]
gi|557532408|gb|ESR43591.1| hypothetical protein
CICLE_v10011287mg [Citrus clementina]
Length = 629
Score = 92.0 bits (227), Expect = 3e-16
Identities = 81/254 (31%), Positives = 114/254 (44%), Gaps = 3/254 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAY-TVYYA--PNHFSPHPQNQGMLFPQMA 176
R+AHLQ QYA M I + +V+P Y ++YY P S P G+++ +
Sbjct: 375 RQAHLQLQYAQHMAGIEG-----SSANVIPSGYPSLYYTTPPGIVSQVPPRPGLMYQPLG 429
Query: 177 VXXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGVSQ 356
+ A Q P+ + R R RM PQ G S
Sbjct: 430 LRTGWRANGFVPPTRPAFQVSPLPVNPKHNRQNRGRMNGNMLPQVGAHYM---QQSSQSA 486
Query: 357 LSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGKNL 536
S KD++ +QQ+ QS KYVPNGR RE + + V G ++ + GV +
Sbjct: 487 ASSKDSS-NQQKGGQS-KYVPNGRTRE-LNKGSGVSLGTFN----SGGVM------ARKP 533
Query: 537 ESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPDSL 716
+ L+ LA A P +KQ+LGE LYP V+ KP KITG +P+SL
Sbjct: 534 DMLNGMLAAASPEQQKQILGERLYPLVEKHKPDLVAKITGMLLQMDNSELLLLLESPESL 593
Query: 717 SAKVEEAFEVLRSS 758
+ KVEEA +VL+ S
Sbjct: 594 AVKVEEAVQVLKLS 607
>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding
protein, putative [Ricinus communis]
Length = 632
Score = 90.9 bits (224), Expect = 6e-16
Identities = 80/256 (31%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY--APNHFSPHPQNQGMLFPQMAV 179
R+A LQ QYA + P+ V+PG YT Y AP+ P P GM++ +A+
Sbjct: 376 RQAQLQLQYAQRIAGFHGPSTP-----VIPGGYTPLYYTAPSQVHPRP---GMMYQPLAM 427
Query: 180 XXXXXXXXXXXXXXXAIQ--RMP-MAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGV 350
Q +P M + + + R RM PQ G
Sbjct: 428 RPGWRGNGFAPPSRPVFQPSHLPVMPISQRQHKQGRVRMNGHVLPQGGTQSVSYVQQPAQ 487
Query: 351 SQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGK 530
S KD P QR Q+ KYVPNGR + K + + + ++ P +
Sbjct: 488 PLTSLKD--PSNQRAGQA-KYVPNGRTCDVSKGSGVL-----------SAAPNSTGPVSQ 533
Query: 531 NLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPD 710
E LS+ LA A P +KQ+LGE LYP V+ KP KITG +P+
Sbjct: 534 GSEVLSSMLAAASPDEQKQILGEQLYPLVRKHKPDLVAKITGMLLEMDNSELLLLLESPE 593
Query: 711 SLSAKVEEAFEVLRSS 758
SL+AKVEEA +VL+ S
Sbjct: 594 SLAAKVEEAVQVLKIS 609
>ref|XP_004494108.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cicer arietinum]
Length = 635
Score = 90.5 bits (223), Expect = 7e-16
Identities = 80/257 (31%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY--APNHFSPHPQNQGMLFPQMAV 179
R+A LQ QYA + ++ P+ + ++PG Y YY A S P G+++ + +
Sbjct: 375 RQAQLQLQYAQQIAGLAGPSTA-----IVPGGYPPYYYTATGVVSHAPPQAGLMYQPLPL 429
Query: 180 XXXXXXXXXXXXXXXAIQR-MPMAMGNPRI-RTPRSRMTSPAAPQQGQLM-TVLPTPQGV 350
Q +P+A N R R R RM A Q T +P Q
Sbjct: 430 RPGWRANGSAPPVRSFQQSPIPVASNNTRQHRQNRGRMNGHAVSQGNTHSGTYMPQAQQA 489
Query: 351 SQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQ-QLEANGVSHTIVPEG 527
SQ Q+ KYVP+GR R+ K + G + GV H++
Sbjct: 490 SQSVISPRESSTQQRTGQAKYVPSGRHRDMEKGSGFSSGGSNSGGSSQGTGVLHSM---- 545
Query: 528 KNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTP 707
LA A P +K +LGE LY VQ LKP A KITG +P
Sbjct: 546 ---------LANATPEQQKDILGEHLYMLVQKLKPNLAAKITGMLLEMDNAELLVLMESP 596
Query: 708 DSLSAKVEEAFEVLRSS 758
+SLSAKVEEAF+VL++S
Sbjct: 597 ESLSAKVEEAFQVLKNS 613
>ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus] gi|449521207|ref|XP_004167621.1|
PREDICTED: probable polyadenylate-binding protein
At2g36660-like [Cucumis sativus]
Length = 640
Score = 88.2 bits (217), Expect = 4e-15
Identities = 73/258 (28%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY--APNHFSPHPQNQGMLFPQMAV 179
R+ L+ Q+A + I P+ + + PG Y YY AP P G++F + +
Sbjct: 377 RQMQLKLQFAQRLAGIPGPSTT-----IFPGGYPPYYYPAPGVVPPVASRPGLMFQPLGM 431
Query: 180 XXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRS---RMTSPAAPQQGQLMTV--LPTPQ 344
Q P+ + R PR +M P Q + +V + Q
Sbjct: 432 RPGWRPNTYTSPARPGFQPSPLPIIPTASRQPRQNRGKMNGPILSHQNGVQSVSYMQNSQ 491
Query: 345 GVSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPE 524
+Q + Q+ KYVPN R E KT+ A A +++
Sbjct: 492 DANQSVVTAKSSSNQQWTGQVKYVPNARSCETNKTSGASA---------AAAAFNSVGDV 542
Query: 525 GKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXT 704
+ + LS+ LA + P +KQ+LGE LYP VQ KP A KITG +
Sbjct: 543 SQGSQILSSMLASSPPDQQKQILGEHLYPLVQKRKPDLAAKITGMLLEMDNSELLLLLES 602
Query: 705 PDSLSAKVEEAFEVLRSS 758
P+SL+AKVEEA +VL+ S
Sbjct: 603 PESLAAKVEEAVQVLKIS 620
>ref|XP_003521427.1| PREDICTED: polyadenylate-binding protein 7-like [Glycine max]
Length = 632
Score = 88.2 bits (217), Expect = 4e-15
Identities = 79/256 (30%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY--APNHFSPHPQNQGMLFPQMAV 179
R+A LQ QYA + +S P+ + ++PG Y YY A S P G+++ + +
Sbjct: 375 RKAQLQLQYAQQVAGLSGPSTA-----IIPGGYPPYYYAATGVISHVPPRAGLMYQHLPM 429
Query: 180 XXXXXXXXXXXXXXXAIQR-MPMAMGNPRI-RTPRSRMT-SPAAPQQGQLMTVLPTPQGV 350
Q +P N R R R R+ +P A +T LP Q +
Sbjct: 430 RPGWGANGFALPARSFQQSPVPAVSNNTRQHRQNRGRLNGNPIAQGNTHSVTYLPQAQQI 489
Query: 351 SQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGK 530
SQ + QQR Q+ KY+P+GR R+ K + + G + +
Sbjct: 490 SQPVISSST--QQRTGQA-KYLPSGRQRDMEKGSGSSSSGSNSGR------------GSQ 534
Query: 531 NLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPD 710
E L + LA A P +K++LGE LY V LKP A KITG +P+
Sbjct: 535 GSEMLHSMLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLESPE 594
Query: 711 SLSAKVEEAFEVLRSS 758
SLSAKVEEA +VL++S
Sbjct: 595 SLSAKVEEAVQVLKNS 610
>ref|XP_006482368.1| PREDICTED: polyadenylate-binding protein 7-like [Citrus sinensis]
Length = 628
Score = 86.3 bits (212), Expect = 1e-14
Identities = 77/254 (30%), Positives = 109/254 (42%), Gaps = 3/254 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAY-TVYYA--PNHFSPHPQNQGMLFPQMA 176
R+AHLQ QYA M I + +V+P Y ++YY P S P G+++ +
Sbjct: 375 RQAHLQLQYAQHMAGIEG-----SSANVIPSGYPSLYYTTPPGIVSQVPPRPGLMYQPLG 429
Query: 177 VXXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGVSQ 356
+ A P+ + R R RM PQ G Q SQ
Sbjct: 430 LRTGWRANGFVPPTRPAFHVSPLPVNPKHNRQNRGRMNGNMLPQVGAHYM-----QQSSQ 484
Query: 357 LSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGKNL 536
+ Q+ QS KYVPNGR+RE + + V G ++ + GV +
Sbjct: 485 SAASSKDSSNQQGGQS-KYVPNGRIRE-LNKGSGVSLGTFN----SGGVM------ARKP 532
Query: 537 ESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPDSL 716
+ L+ LA P +KQ+LGE LYP V+ KP KITG +P+SL
Sbjct: 533 DMLNGMLAAPSPEQQKQILGERLYPLVEKHKPDLVAKITGMLLEMDNSELLLLLESPESL 592
Query: 717 SAKVEEAFEVLRSS 758
+ KVEEA +VL+ S
Sbjct: 593 AVKVEEAVQVLKLS 606
>ref|XP_003554408.1| PREDICTED: polyadenylate-binding protein 7-like [Glycine max]
Length = 636
Score = 85.1 bits (209), Expect = 3e-14
Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY--APNHFSPHPQNQGMLFPQMAV 179
R+A LQ QYA + +S P+ + ++P Y YY A S P G+++ +A+
Sbjct: 375 RKAQLQLQYAQQLARLSGPSTA-----IIPSGYPPYYYAASGVISHVPPRAGLMYQHLAL 429
Query: 180 XXXXXXXXXXXXXXXAIQR-MPMAMGNPRIRTPRSRMTSPAAPQQGQLM--TVLPTPQGV 350
Q +P N R + + QG T LP Q +
Sbjct: 430 RPGWGANGFAPPARSFQQSPVPAVSNNTRQHRQNRGKLNGNSIAQGNTHSGTYLPQAQQI 489
Query: 351 SQ--LSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPE 524
SQ +S +D++ QQR Q+ +Y+P+GR R+ K + + G + + G
Sbjct: 490 SQPVISSRDSST-QQRTGQA-RYIPSGRQRDVEKGSGSSSVGSNSGRGGSQGS------- 540
Query: 525 GKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXT 704
E L + LA A P +K++LGE LY V LKP A KITG +
Sbjct: 541 ----EMLHSLLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLES 596
Query: 705 PDSLSAKVEEAFEVLRSS 758
P+SLSAKVEEA +VL++S
Sbjct: 597 PESLSAKVEEAVQVLKNS 614
>ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein
SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 80.9 bits (198), Expect = 6e-13
Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 9/265 (3%)
Frame = +3
Query: 3 VRRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYT-VYYA--PNHFSPHPQNQGMLFPQM 173
+R+A LQ QYA M + P G+ + AY VYYA P PQ QG+++ Q
Sbjct: 399 IRQAQLQQQYAQRMSGLMPPP-----GAQVAAAYPPVYYAAPPALLPQVPQRQGLMY-QP 452
Query: 174 AVXXXXXXXXXXXXXXXAIQRMP--MAMGNPRIRTPRSRMTSPAAPQQGQLMTV-LPTPQ 344
+ ++Q +P + N + + + R P Q+ + +P PQ
Sbjct: 453 VMRPGWRTGPLAPPGRPSLQPLPPYALVPNAQRQQRQVRNRPPGGQPLAQIPQLQIPQPQ 512
Query: 345 GVSQLSYKDAAPHQQ-RPWQSGKYVPNGRVREPVKTTNAV--VPGKYHQQLEANGVSHTI 515
+ YK+ +QQ RP Q+ KYV NGR R+ V VPG
Sbjct: 513 AIQPGGYKENGRNQQQRPRQAMKYVNNGRPRDGAAAGGPVLMVPGN-------------- 558
Query: 516 VPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXX 695
+P G N + + ++ A P +KQ+LGE L+P V+ + A KITG
Sbjct: 559 MPMGGN--DVLSMMSAASPQQQKQLLGERLFPLVRTHQFDLAGKITGMLLEMDNSELLVL 616
Query: 696 XXTPDSLSAKVEEAFEVLRSSGDVS 770
TP++L++KV+EA +VL+ S
Sbjct: 617 LETPEALASKVDEAVQVLQQHSKAS 641
>ref|XP_006338922.1| PREDICTED: polyadenylate-binding protein 7-like [Solanum tuberosum]
Length = 628
Score = 79.3 bits (194), Expect = 2e-12
Identities = 77/267 (28%), Positives = 113/267 (42%), Gaps = 10/267 (3%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYYAPNH--FSPHPQNQGMLFPQMAV 179
R+A LQ Q+A + + T ++ PGAY Y P H P G+++ +A+
Sbjct: 375 RQAQLQLQHAQRLAGL------TGASAMYPGAYPPLYYPGHGVVPQVPARPGLMYQSLAM 428
Query: 180 XXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPT------- 338
+ Q P+ M R P +G++ +P
Sbjct: 429 RPGWGTNGFTNTPRPSYQPAPVPMIPNTYR--------PYRQNRGRMNGYMPASNVTNVQ 480
Query: 339 PQGVSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIV 518
P G +S KD+ QR Q ++ PNG+ R+ V G + S +
Sbjct: 481 PSGQPAVSSKDS----QRAGQV-RFAPNGQTRD-------VTRGSFVSNAAG---SMAVG 525
Query: 519 PEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXX 698
E LST LA A+ +KQ+LGE LYP V KP+ A KITG
Sbjct: 526 SAADGTEMLSTLLASANSDQQKQILGERLYPLVGKHKPELASKITGMLLEMDNAELLLLL 585
Query: 699 XTPDSLSAKVEEAFEVLR-SSGDVSAE 776
+P+SL+AKVEEA EVL+ S+ VS++
Sbjct: 586 ESPESLAAKVEEAVEVLKLSNAKVSSQ 612
>ref|XP_004249577.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Solanum lycopersicum]
Length = 622
Score = 74.3 bits (181), Expect = 6e-11
Identities = 72/258 (27%), Positives = 107/258 (41%), Gaps = 7/258 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYYAPNH--FSPHPQNQGMLFPQMAV 179
R+A LQ Q+A + + T ++ PGAY Y P H P G+++ +A+
Sbjct: 375 RQAQLQLQHAQRLAGL------TGASAMYPGAYPPLYYPGHGVVPQVPARPGLMYQSLAM 428
Query: 180 XXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGVS-Q 356
+ Q P+ M R P P +G++ +P + Q
Sbjct: 429 RPGWGTNGFTNTPRPSYQPAPVPMIPNAYR--------PYRPNRGRMNGYMPASNVTNVQ 480
Query: 357 LSYKDAAPHQ--QRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGK 530
S + A P + QR Q ++ PNG+ R+ N S + E
Sbjct: 481 PSGQPAVPSKDSQRAGQV-RFAPNGQTRD------------------VNNRSFGSIAESA 521
Query: 531 --NLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXT 704
E LST LA A+ +KQ+LGE LYP V KP+ A KITG +
Sbjct: 522 ADGTEMLSTLLASANSDQQKQILGERLYPLVHKHKPELASKITGMLLEMDNAELLLLLES 581
Query: 705 PDSLSAKVEEAFEVLRSS 758
P+SL+ KV+EA +VL+ S
Sbjct: 582 PESLATKVDEAVDVLKLS 599
>ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
gi|355500749|gb|AES81952.1| Polyadenylate binding protein
[Medicago truncatula]
Length = 613
Score = 71.2 bits (173), Expect = 5e-10
Identities = 73/257 (28%), Positives = 102/257 (39%), Gaps = 6/257 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY--APNHFSPHPQNQGMLFPQMAV 179
R+A LQ QYA + ++ P+ + ++PG Y +Y A S P G+++ MA+
Sbjct: 373 RQAQLQLQYAQQIAGLAGPSTA-----IVPGGYPPFYYTATGVVSHAPPRAGLVYQPMAL 427
Query: 180 XXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRS---RMTSPAAPQQGQLM-TVLPTPQG 347
Q + N R R RM A Q T +P Q
Sbjct: 428 RPGWRANGSAPPARSFQQSPTPVVSNNNTRQHRQNRGRMNGHAVSQGNTHSGTYMPQAQQ 487
Query: 348 VSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEG 527
SQ + Q+ KYVP+GR RE K + L ++G S
Sbjct: 488 ASQSAISSRESSTQQRTGQAKYVPSGRHREMEKGSG----------LSSSGGS------- 530
Query: 528 KNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTP 707
E L + LA A P +K++LGE LY VQ +KP A KITG
Sbjct: 531 LGPEVLHSMLANATPEQQKEILGEHLYMLVQKIKPNLAAKITGMLLEMD----------- 579
Query: 708 DSLSAKVEEAFEVLRSS 758
VEEAF+VL++S
Sbjct: 580 -----NVEEAFQVLKNS 591
>ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8
[Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 70.9 bits (172), Expect = 6e-10
Identities = 71/264 (26%), Positives = 104/264 (39%), Gaps = 14/264 (5%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGA----YTVYYAPNHFSPHPQNQGMLFPQM 173
R+A LQ Q++ + P PA+ PG ++Y + P G + Q
Sbjct: 402 RKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPPQPGFGYQQQ 461
Query: 174 AVXXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGVS 353
V MPM M + + + + P G+ LP PQ
Sbjct: 462 LVPGMRPGGSPMPNFF-----MPM-MQQGQQQQQQQQQQQQQRPGGGRRGGALPQPQ--- 512
Query: 354 QLSYKDAAPHQQRPWQSGKYVPNGRV-REPVKTTNAVVPGKYHQQLEA-------NGVSH 509
Q P + P GR+ R P + N + PG L GV H
Sbjct: 513 ----------QPSPMMQQQMHPRGRMYRYPQRDVNTM-PGLTPNMLSVPYDVSSGGGVHH 561
Query: 510 TIVPEGKNLE--SLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXX 683
P +++ +L+T LA A P ++ MLGE LYP V+ L+P+ A K+TG
Sbjct: 562 RDSPASQSVPIGALATQLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTE 621
Query: 684 XXXXXXTPDSLSAKVEEAFEVLRS 755
+P++L AKV EA +VLRS
Sbjct: 622 VLHLLESPEALKAKVTEAMDVLRS 645
>ref|XP_004987062.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Setaria italica]
Length = 661
Score = 70.5 bits (171), Expect = 8e-10
Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 5/270 (1%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYT-VYYA-PN-HFSPHPQNQGMLFPQMA 176
RRA LQ +A + + PA S++P Y VY+A PN H P G ++P M
Sbjct: 411 RRAKLQQHFAQLATMVG-PA-----NSMIPTGYPHVYFAHPNTHLPQGPPRHGFVYPPMG 464
Query: 177 VXXXXXXXXXXXXXXXAIQRMPMAMGNPR-IRTPRSRMTSPAAPQQGQLMTVLPTPQGVS 353
+ PM +PR R+ R RM ++P P V
Sbjct: 465 LSHEWRPNMFPSPPNIPQIHSPMMPNSPRHYRSNRGRMGG----------NMMPLPHTVH 514
Query: 354 QLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVS-HTIVPEGK 530
++Y AP P + +P R P +N V+ ANG++ H P
Sbjct: 515 AVNYVAHAP----PAKDFMSMPRQRFSHPKYFSNDVM---------ANGLAIHHGDPVLS 561
Query: 531 NLESLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTPD 710
+S ST LA A P +K++LG L+P V+ +P+ ARKITG + +
Sbjct: 562 ENDSSSTYLASAPPGEQKKLLGNRLFPLVERHQPRLARKITGMLLELDSSEVVTLLCSSE 621
Query: 711 SLSAKVEEAFEVLRSSGDVSAEM*NNYP*F 800
LS KV+E ++L ++ + + +P F
Sbjct: 622 MLSTKVDECMQLLHATNPKAEDQEPLHPGF 651
>ref|XP_006393217.1| hypothetical protein EUTSA_v10011289mg [Eutrema salsugineum]
gi|557089795|gb|ESQ30503.1| hypothetical protein
EUTSA_v10011289mg [Eutrema salsugineum]
Length = 669
Score = 70.1 bits (170), Expect = 1e-09
Identities = 70/256 (27%), Positives = 101/256 (39%), Gaps = 6/256 (2%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGA----YTVYYAPNHFSPHPQNQGMLFPQM 173
R+A LQ Q++ + P PA+ PGA ++Y + P G + Q
Sbjct: 400 RKARLQAQFSQMRPVNMPPAVGPRMPMYPPGAPPMGQQLFYGQGPPAMIPPQPGYGYQQQ 459
Query: 174 AVXXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGVS 353
V MPM M + + + + P G+ LP PQ S
Sbjct: 460 LVPGMRPGGSPMPNFF-----MPM-MQQGQQQQQQQQQQQQQRPGGGRRGGALPQPQQPS 513
Query: 354 QLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTIVPEGKN 533
+ P Q P P V T ++ Y A G P G+
Sbjct: 514 MMQ-----PQQMHPRGRMYRYPQRDVNTMPGLTPNMLSVPYDVSGGAGGGHLRDSPAGQP 568
Query: 534 LE--SLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXXXXXXXXTP 707
+ +L+T+LA A P ++ MLGE LYP V+ L+P+ A K+TG +P
Sbjct: 569 VPIGALATSLANAAPEHQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESP 628
Query: 708 DSLSAKVEEAFEVLRS 755
D+L AKV EA +VLRS
Sbjct: 629 DALKAKVAEAMDVLRS 644
>ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein
8 [Arabidopsis thaliana]
gi|75334461|sp|Q9FXA2.1|PABP8_ARATH RecName:
Full=Polyadenylate-binding protein 8; Short=PABP-8;
Short=Poly(A)-binding protein 8
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A
Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A
Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding
Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8
[Arabidopsis thaliana] gi|332194352|gb|AEE32473.1|
poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 70.1 bits (170), Expect = 1e-09
Identities = 71/264 (26%), Positives = 104/264 (39%), Gaps = 14/264 (5%)
Frame = +3
Query: 6 RRAHLQTQYAHVMPAISAPAISTNGGSVLPGA----YTVYYAPNHFSPHPQNQGMLFPQM 173
R+A LQ Q++ + P PA+ PG ++Y + PQ G + Q
Sbjct: 408 RKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPQ-PGFGYQQQ 466
Query: 174 AVXXXXXXXXXXXXXXXAIQRMPMAMGNPRIRTPRSRMTSPAAPQQGQLMTVLPTPQGVS 353
V MPM + + + + P ++G L PQ
Sbjct: 467 LVPGMRPGGSPMPNFF-----MPMMQQGQQQQQQQQQQQRPGGGRRGAL------PQ--- 512
Query: 354 QLSYKDAAPHQQRPWQSGKYVPNGRV-REPVKTTNAVVPGKYHQQLEA-------NGVSH 509
P Q P + P GR+ R P + N + PG L GV H
Sbjct: 513 --------PQQPSPMMQQQMHPRGRMYRYPQRDVNTM-PGPTQNMLSVPYDVSSGGGVHH 563
Query: 510 TIVPEGKNLE--SLSTNLAKADPPSRKQMLGEFLYPRVQGLKPKFARKITGXXXXXXXXX 683
P + + +L+T LA A P ++ MLGE LYP V+ L+P+ A K+TG
Sbjct: 564 RDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTE 623
Query: 684 XXXXXXTPDSLSAKVEEAFEVLRS 755
+P++L AKV EA +VLRS
Sbjct: 624 VLHLLESPEALKAKVTEAMDVLRS 647