BLASTX nr result

ID: Ephedra26_contig00004140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004140
         (997 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17753.1| unknown [Picea sitchensis]                              96   2e-17

>gb|ABR17753.1| unknown [Picea sitchensis]
          Length = 668

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 111/373 (29%), Positives = 173/373 (46%), Gaps = 48/373 (12%)
 Frame = -3

Query: 995  SRAFSDAYLCPDRTAVL----DSDVLLSIVQRVAS-----------------VPVPLGTD 879
            SR FSD  L PDR A      +SD +L I++ V S                 VP P    
Sbjct: 103  SRTFSDCLLPPDRNADAALEWNSDRILHILEAVGSLSLDDAETENVSETPKNVPEP-APK 161

Query: 878  KDITTQHKD-------------FTSKMVITEQPPPPGGVDNLHLDFSAAS-SDAIEGYVP 741
            K++  + K+             F+S+++I EQ    G    +  D S+A  SDAIEGYVP
Sbjct: 162  KNVLEEFKEGRKNENNNNSEEKFSSELLIHEQENGSGEKILVAFDSSSAGPSDAIEGYVP 221

Query: 740  ----KRKHTS--AVKS-SPSMEQSGHKSAKNDRSSNS-EQASEFTSAIIMNEPQGNVDNL 585
                +R H    A KS S S ++ G K +KN     +  + S+F+S II+ +P  +V   
Sbjct: 222  QGEQRRLHLQPPADKSVSKSPKKKGPKKSKNSLKRGAPRKESDFSSTIIIGQPCADVALN 281

Query: 584  GSHSAIHQYDGSDKEAKELTVKKDRCEREQVVQSGIEIGAPILKSSLKAEGKRGKRRSVK 405
            G+ S+I   +      + L  K  + ER+  +Q+  +     L+S+LK +G +   RSV 
Sbjct: 282  GATSSIVISE------ETLNQKDQKSERKLDLQNENKSEVMKLRSALKTQGVKQLNRSVT 335

Query: 404  WDDMKELEATNLPQSSDKMIPMGKTQVE---TDSLVWTNLSKSCSTATVLDVKEIESLDI 234
            W D K+ E       SD +  + K  ++   T S+V  +  +S S +     K+ ESL+ 
Sbjct: 336  WADEKKFE------QSDHIEVLEKRTLDNSNTSSIVALHSLESTSQSATFG-KDAESLES 388

Query: 233  SKPEFNEQNVRDACVEXXXXXXXXXXXXXXXXXXXELDTEEAVSRAGIYIIPGDGNRIFE 54
             + EFNE NV+ + +E                   E+D  EA S+ GI IIPG  +   +
Sbjct: 389  IRAEFNEANVKASRLEAAEVFAKALTEAANAVASGEVDASEAASKVGICIIPGTDDEDPQ 448

Query: 53   K--DNLKEEDRTQ 21
            K  +++++ D TQ
Sbjct: 449  KTQNDVEKLDSTQ 461


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