BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004130
         (3414 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A...  1598   0.0  
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1585   0.0  
ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi...  1585   0.0  
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1561   0.0  
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1555   0.0  
ref|XP_006648214.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1552   0.0  
gb|EEE56150.1| hypothetical protein OsJ_05035 [Oryza sativa Japo...  1550   0.0  
gb|EAY84119.1| hypothetical protein OsI_05501 [Oryza sativa Indi...  1550   0.0  
gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, puta...  1548   0.0  
gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus...  1547   0.0  
ref|XP_003571468.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1546   0.0  
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1541   0.0  
ref|XP_002463258.1| hypothetical protein SORBIDRAFT_02g040700 [S...  1541   0.0  
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1540   0.0  
tpg|DAA63842.1| TPA: hypothetical protein ZEAMMB73_506422 [Zea m...  1529   0.0  
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1528   0.0  
ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, par...  1528   0.0  
ref|XP_002966396.1| hypothetical protein SELMODRAFT_144158 [Sela...  1528   0.0  
ref|XP_002978166.1| hypothetical protein SELMODRAFT_108064 [Sela...  1527   0.0  
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...  1525   0.0  

>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
            gi|548853523|gb|ERN11506.1| hypothetical protein
            AMTR_s00022p00114710 [Amborella trichopoda]
          Length = 2171

 Score = 1598 bits (4139), Expect = 0.0
 Identities = 811/1026 (79%), Positives = 907/1026 (88%), Gaps = 1/1026 (0%)
 Frame = -3

Query: 3076 QDVESEDDDLGGDAHQSEAMQMGGIDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSA 2897
            ++ +++++D G +A  + AMQMGG+DD+D+E ADEG  LNVQDIDAYWLQRKIT A++  
Sbjct: 235  EETDNDEEDDGENAKDTSAMQMGGLDDDDVEEADEG--LNVQDIDAYWLQRKITQAYTD- 291

Query: 2896 IDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLAR 2717
            IDPQ SQ+LAEEVL+ILA +GD RDVEN LV LLD++KFDLIKLLLRNR K+VWCTRLAR
Sbjct: 292  IDPQHSQKLAEEVLKILA-EGDDRDVENRLVMLLDYDKFDLIKLLLRNRLKVVWCTRLAR 350

Query: 2716 SEDQEERKRIEYEMSGDGV-LRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXX 2540
            +EDQ++RK IE EM   G  L AILEQLHATRATAKERQKNLE+S+R+EAR+L       
Sbjct: 351  AEDQKQRKSIEEEMMDGGPGLVAILEQLHATRATAKERQKNLEKSIRDEARRLKDDGDRE 410

Query: 2539 XXXXXXXXXXGMENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEV 2360
                       +ENSWLKGQR LLDLE ++F +GGLLMANKKCELP GS+R+ +KGYEEV
Sbjct: 411  RRLERDGFP--VENSWLKGQRHLLDLEILAFQKGGLLMANKKCELPPGSYRTPKKGYEEV 468

Query: 2359 HXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPT 2180
            H       P++ GE+LIKI  +PEW QPAF  MK LNRVQSRVYETALFT EN+LLCAPT
Sbjct: 469  HVPALKPKPMAPGEELIKIAVLPEWAQPAFSEMKQLNRVQSRVYETALFTPENILLCAPT 528

Query: 2179 GAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNIT 2000
            GAGKTNVA+LTILQQ+GL+R  DG  D SS+KIVYVAPMKALVAEVVGNLSKRL  Y ++
Sbjct: 529  GAGKTNVAMLTILQQLGLHRNADGSFDNSSYKIVYVAPMKALVAEVVGNLSKRLQAYGVS 588

Query: 1999 VKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRG 1820
            VKELTGDQ+LSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK           DNRG
Sbjct: 589  VKELTGDQTLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRG 648

Query: 1819 PVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPL 1640
            PVLESIVSRTVRQIETT+E IRLVGLSATLPNY+DVALFLRVDK KGLF+FDNSYRPCPL
Sbjct: 649  PVLESIVSRTVRQIETTKEHIRLVGLSATLPNYQDVALFLRVDKDKGLFHFDNSYRPCPL 708

Query: 1639 SQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALAN 1460
            +QQYIG+TV+KPLQRFQLMNDICY+KV + AGKHQVLVFVHSRKETAKTAR IRD ALAN
Sbjct: 709  AQQYIGITVKKPLQRFQLMNDICYKKVEAIAGKHQVLVFVHSRKETAKTARAIRDTALAN 768

Query: 1459 DTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRH 1280
            DT+GRF+K D  SREIL SE+E VK+T+LKD+LPYGFAIHHAGM+R D TLVE+LF D H
Sbjct: 769  DTLGRFLKEDSVSREILQSEAENVKSTELKDLLPYGFAIHHAGMTRADRTLVEELFSDSH 828

Query: 1279 IQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYG 1100
            IQVLVSTA LAW VNLPAHT+IIK T IYNPEKG WTELSPLDVMQML RAGRPQYD+YG
Sbjct: 829  IQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGIWTELSPLDVMQMLGRAGRPQYDTYG 888

Query: 1099 EGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYL 920
            EGII+TGHSELQYYLSLMN+QLPIESQFVSKLAD LNAEIVLGTVQNAREACTWLGYTYL
Sbjct: 889  EGIILTGHSELQYYLSLMNEQLPIESQFVSKLADQLNAEIVLGTVQNAREACTWLGYTYL 948

Query: 919  YIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLG 740
            YIRMLRNPVLYGL+ DA+EKD TLEERRADL+HSAATILD+NNLVKYDRKSGYFQVTDLG
Sbjct: 949  YIRMLRNPVLYGLTTDAIEKDKTLEERRADLVHSAATILDKNNLVKYDRKSGYFQVTDLG 1008

Query: 739  RISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVP 560
            RI+SYYYISHGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLLDRVP
Sbjct: 1009 RIASYYYISHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVP 1068

Query: 559  IPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWA 380
            IPVKESLEEP AKINVLLQA ISQLKLEGLSL SDMV+ITQ+AGRLLRALFEIVLKRGWA
Sbjct: 1069 IPVKESLEEPCAKINVLLQAYISQLKLEGLSLASDMVYITQSAGRLLRALFEIVLKRGWA 1128

Query: 379  QLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELI 200
            QLAE+AL LCKMV KRMWSVQTPLRQFKGIPN++L+KIEKKD++WERYYDLS+QEI ELI
Sbjct: 1129 QLAEKALNLCKMVGKRMWSVQTPLRQFKGIPNDILMKIEKKDLAWERYYDLSSQEIGELI 1188

Query: 199  RVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWILV 20
            R  KMG  +++ IHQFPKL+L+A++QPITRTVL++ELTITPDF W+E+VHGYVEPFW++V
Sbjct: 1189 RFPKMGKTLHKFIHQFPKLNLAANVQPITRTVLRVELTITPDFQWDEKVHGYVEPFWVIV 1248

Query: 19   EDNDGE 2
            EDNDGE
Sbjct: 1249 EDNDGE 1254



 Score =  291 bits (745), Expect = 1e-75
 Identities = 215/726 (29%), Positives = 355/726 (48%), Gaps = 14/726 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N +Q++V+     + +N+L+ APTG+GKT  A   +L+     +GPD     S  ++
Sbjct: 1348 KHFNPIQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFALLRNH--QKGPD-----SIMRV 1400

Query: 2080 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VY+AP++AL  E   +  ++      + V ELTG+ +   + +E+ Q+I+ TPEKWD ++
Sbjct: 1401 VYIAPIEALAKERYRDWEQKFGKGLGLRVVELTGETATDLKLLEKAQVIIGTPEKWDALS 1460

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1461 RRWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYISSQVENKIRIVALSTSLAN 1520

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1547
             +D+  ++    S GLF F    RP PL     G+ +     R Q M    Y  V+  A 
Sbjct: 1521 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAMTKPTYTAVVQHAK 1579

Query: 1546 -GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGAS-----REILHSESEKVK 1385
             GK   LV+V +RK       H R  AL   T      G+ +S      E+L     +V 
Sbjct: 1580 VGK-PALVYVPTRK-------HARLTALDLVTYANAESGEKSSFLLQPEEVLEPFISRVS 1631

Query: 1384 NTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKC 1205
               L   L +G    H G+S +D  +V  LF    IQV VS++++ W   L AH +++  
Sbjct: 1632 EPALSAALRHGVGYIHEGLSSIDQDVVSHLFSAGCIQVCVSSSSMCWGTPLLAHLVVVMG 1691

Query: 1204 T*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 1025
            T  Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+E
Sbjct: 1692 TQYYDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFVYESFPVE 1751

Query: 1024 SQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLE 845
            S     L DNLNAE+V+G +++ ++A  +L +T++Y R+ +NP  Y L          L 
Sbjct: 1752 SHLQHFLHDNLNAEVVVGIIESKQDAVDYLTWTFMYRRLSQNPNYYNLQG---VSHRHLS 1808

Query: 844  ERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMG 665
            +  ++L+ +  + L+ +  V  +         +LG I+SYYYIS+ T+  ++  L     
Sbjct: 1809 DHLSELVENTLSNLEASKCVAIEEDMD-LSPLNLGMIASYYYISYTTIERFSSLLTAKTK 1867

Query: 664  DIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQ 488
               L  + + + E+  + +R  E+  + KL++     V K    +P  K N LLQA  S+
Sbjct: 1868 LKGLIEILASASEYADLPIRPGEEEMIRKLINHQRFSVEKPRYTDPHLKANALLQAHFSR 1927

Query: 487  LKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPL 308
              + G +L +D   +  +A RLL+A+ +++   GW  LA  A++L +MV++ MW   + L
Sbjct: 1928 HTVVG-NLAADQREVLLSANRLLQAMVDVISSNGWLVLALSAMELSQMVTQSMWDKDSVL 1986

Query: 307  RQFKGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKL 143
             Q      E+  K  E    S E  +DL   E  E   + +M       I +  ++FP +
Sbjct: 1987 LQLPHFTRELAKKCKENPGKSIETIFDLLEMEDDERRDLLQMSDSQLLDIAKYCNRFPNI 2046

Query: 142  DLSAHI 125
            D+S  +
Sbjct: 2047 DMSYEV 2052


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score = 1585 bits (4105), Expect = 0.0
 Identities = 805/1030 (78%), Positives = 896/1030 (86%), Gaps = 3/1030 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAH 2906
            MVQ+ E EDDD+  + + S AMQMGG IDD+DM+ A+EGM LNVQDIDAYWLQRKI+ A+
Sbjct: 235  MVQEDEEEDDDVM-EQNGSGAMQMGGGIDDDDMQEANEGMTLNVQDIDAYWLQRKISQAY 293

Query: 2905 SSAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTR 2726
               IDPQ+ Q+LAEEVL+ILA +GD R+VE  L+  L F+KF LIK LLRNR KIVWCTR
Sbjct: 294  EQQIDPQQCQKLAEEVLKILA-EGDDREVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTR 352

Query: 2725 LARSEDQEERKRIEYEMSGDGV-LRAILEQLHATRATAKERQKNLERSLREEARKLXXXX 2549
            LAR+EDQEERK+IE EM+G G  L AILEQLHATRATAKERQK LE+S+REEAR+L    
Sbjct: 353  LARAEDQEERKKIEEEMTGSGSDLAAILEQLHATRATAKERQKILEKSIREEARRLKDES 412

Query: 2548 XXXXXXXXXXXXXG-MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKG 2372
                            E+ WLKGQRQLLDL+ I+FHQGG LMANKKCELP GS+R   KG
Sbjct: 413  GGDGDRDRRGPVDRDAESGWLKGQRQLLDLDGIAFHQGGFLMANKKCELPTGSYRHHSKG 472

Query: 2371 YEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLL 2192
            YEEVH        L  GE+L+KI+ MP+W QPAF GM  LNRVQS+VYETALFTAEN+LL
Sbjct: 473  YEEVHVPALKAAALGPGEELVKISAMPDWAQPAFKGMTQLNRVQSKVYETALFTAENVLL 532

Query: 2191 CAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLAD 2012
            CAPTGAGKTNVA+LTILQQI LNR  DG  + S++KIVYVAPMKALVAEVVGNLS RL  
Sbjct: 533  CAPTGAGKTNVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQH 592

Query: 2011 YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXX 1832
            Y++ VKEL+GDQSL+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK           
Sbjct: 593  YDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLH 652

Query: 1831 DNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYR 1652
            DNRGPVLESIV+RTVRQIETT+E IRLVGLSATLPNYEDVALFLRVD  KGLF+FDNSYR
Sbjct: 653  DNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYR 712

Query: 1651 PCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDA 1472
            PCPL+QQYIG+TV+KPLQRFQLMND+CYEKV++ AGKHQVL+FVHSRKETAKTAR IRD 
Sbjct: 713  PCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDT 772

Query: 1471 ALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLF 1292
            ALANDT+GRF+K D ASREILHS +E VKN DLKD+LPYGFAIHHAGM+R D  LVE+LF
Sbjct: 773  ALANDTLGRFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELF 832

Query: 1291 GDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQY 1112
             D H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQY
Sbjct: 833  ADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQY 892

Query: 1111 DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLG 932
            DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC+W+G
Sbjct: 893  DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIG 952

Query: 931  YTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQV 752
            YTYLY+RMLRNP LYGLS DAL +D TLEERRADLIHSAA ILDRNNLVKYDRKSGYFQV
Sbjct: 953  YTYLYVRMLRNPTLYGLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQV 1012

Query: 751  TDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLL 572
            TDLGRI+SYYYI+HGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKLL
Sbjct: 1013 TDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLL 1072

Query: 571  DRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLK 392
            DRVPIP+KESLEEPSAKINVLLQA ISQLKLEGLSL SDMVFITQ+AGRL+RALFEIVLK
Sbjct: 1073 DRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLK 1132

Query: 391  RGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEI 212
            RGWAQL E+AL LCKMV+KRMWSVQTPLRQF  IPNE+L+K+EKKD++WERYYDLS+QE+
Sbjct: 1133 RGWAQLTEKALNLCKMVNKRMWSVQTPLRQFNAIPNEILMKLEKKDLAWERYYDLSSQEL 1192

Query: 211  IELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPF 32
             ELIR  KMG  +++ IHQFPKLDL+AH+QPITRTVL++ELTITPDF WE++VHG+VEPF
Sbjct: 1193 GELIRYPKMGRTLHKFIHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVHGFVEPF 1252

Query: 31   WILVEDNDGE 2
            W++VEDNDGE
Sbjct: 1253 WVIVEDNDGE 1262



 Score =  282 bits (722), Expect = 6e-73
 Identities = 209/725 (28%), Positives = 351/725 (48%), Gaps = 13/725 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N +Q++V+     T +N+L+ APTG+GKT  A   IL+    N     E   S  + 
Sbjct: 1356 KHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR----NHQKGSE---SIVRA 1408

Query: 2080 VYVAPMKALVAEVVGNLSKRLA-DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VY+AP++AL  E   +  ++      + V ELTG+ +   + +E  Q+I++TPEKWD ++
Sbjct: 1409 VYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALS 1468

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1469 RRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQGENKIRIVALSTSLAN 1528

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1547
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1529 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAK 1587

Query: 1546 GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGA-----SREILHSESEKVKN 1382
             +   +VFV +RK       H+R  A+   T      G+       S E L     K++ 
Sbjct: 1588 NRKPAIVFVPTRK-------HVRLTAVDLTTYSSADGGENPTFLLRSPEELEPFVGKIQE 1640

Query: 1381 TDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT 1202
              L+  L +G    H G++ +D  +V  LF    IQV V +++L W V L AH +++  T
Sbjct: 1641 EMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGT 1700

Query: 1201 *IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIES 1022
              Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES
Sbjct: 1701 QYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVES 1760

Query: 1021 QFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEE 842
                 L DNLNAEIV+G ++N ++A  +L +T++Y R+ +NP  Y L          L +
Sbjct: 1761 HLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSD 1817

Query: 841  RRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGD 662
              ++ + +  + L+ +  V  +         +LG I+SYYYIS+ T+  ++  L      
Sbjct: 1818 HLSESVENTLSDLEASKCVAIEDDMD-LSPLNLGMIASYYYISYTTIERFSSSLTSKTKM 1876

Query: 661  IELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQL 485
              L  + + + E+  + +R  E+  + +L++      +     +P  K N LLQA  S+ 
Sbjct: 1877 KGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSR- 1935

Query: 484  KLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLR 305
            ++ G +L  D   +  +AGRLL+A+ +++   GW  LA  A+++ +MV++ MW   + L 
Sbjct: 1936 QIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLL 1995

Query: 304  QFKGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLD 140
            Q      ++  +  E    S E  +DL   E  E   + +M       I R  ++FP +D
Sbjct: 1996 QLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNID 2055

Query: 139  LSAHI 125
            ++  +
Sbjct: 2056 ITYEV 2060


>ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi|162691189|gb|EDQ77552.1|
            predicted protein [Physcomitrella patens]
          Length = 2180

 Score = 1585 bits (4103), Expect = 0.0
 Identities = 805/1031 (78%), Positives = 899/1031 (87%), Gaps = 5/1031 (0%)
 Frame = -3

Query: 3079 VQDVESEDDDLGGDAHQSEAMQMGGIDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSS 2900
            VQ+    ++  G D  Q+ AMQMGG DDEDME ADEG  LNVQDIDAYWLQRKI+ AH  
Sbjct: 235  VQEESDGEEGDGQDTRQASAMQMGGQDDEDMEEADEG--LNVQDIDAYWLQRKISQAHGD 292

Query: 2899 AIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLA 2720
             IDPQ+SQ+LAE+VL  LA +GD R+VEN LV LLD++KFDLIKLLLRNR K+VWCTRLA
Sbjct: 293  -IDPQQSQKLAEDVLSKLA-EGDDREVENRLVILLDYDKFDLIKLLLRNRLKVVWCTRLA 350

Query: 2719 RSEDQEERKRIEYEMSGDG-VLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXX 2543
            R+ED++ RK+IE EMS  G VL  ILEQLHATRATAKERQKNLERS+REEA+KL      
Sbjct: 351  RAEDEDARKKIEEEMSNGGPVLAGILEQLHATRATAKERQKNLERSIREEAKKLRDDGGE 410

Query: 2542 XXXXXXXXXXXGM----ENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRK 2375
                             E+ WLKGQRQLLDLE ++FHQGGLLMANK+CELP  S+R+ +K
Sbjct: 411  AADRGRRKDREVGVGGGESGWLKGQRQLLDLEQLTFHQGGLLMANKRCELPPLSYRTPKK 470

Query: 2374 GYEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLL 2195
            GYEEVH       P ++GE+L+KI+DMP+W QPAF GMK+LNRVQS+VYETALFT+ENLL
Sbjct: 471  GYEEVHVPHLKPKPFAEGEELVKISDMPDWAQPAFKGMKSLNRVQSKVYETALFTSENLL 530

Query: 2194 LCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLA 2015
            LCAPTGAGKTNVA+LTIL ++GL +  DG  DLSSFKIVYVAPMKALVAE+VGN S+RL 
Sbjct: 531  LCAPTGAGKTNVAMLTILHELGLRKQLDGTFDLSSFKIVYVAPMKALVAEMVGNFSERLE 590

Query: 2014 DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXX 1835
             Y +TV+ELTGD +LSR QIEETQIIVTTPEKWDIITRKSGDRTYTQ+VK          
Sbjct: 591  PYGVTVRELTGDATLSRGQIEETQIIVTTPEKWDIITRKSGDRTYTQMVKLLIIDEIHLL 650

Query: 1834 XDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSY 1655
             DNRGPVLESIV+RTVRQIETTQEMIRLVGLSATLPNYEDVALFL+VD+ KGLFYFDNSY
Sbjct: 651  HDNRGPVLESIVARTVRQIETTQEMIRLVGLSATLPNYEDVALFLKVDEKKGLFYFDNSY 710

Query: 1654 RPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRD 1475
            RPCPL+QQYIGVTVRKPLQRFQLMNDICYEKV+  AGKHQVL+FVHSRKETAKTAR IRD
Sbjct: 711  RPCPLAQQYIGVTVRKPLQRFQLMNDICYEKVMEVAGKHQVLIFVHSRKETAKTARAIRD 770

Query: 1474 AALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDL 1295
            AALANDT+GRF+K DGASREIL  E++ VKN DLK++LPYGFAIHHAGM R D TLVEDL
Sbjct: 771  AALANDTLGRFLKEDGASREILQKENDVVKNNDLKNLLPYGFAIHHAGMGRADRTLVEDL 830

Query: 1294 FGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQ 1115
            FGD HIQVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQ
Sbjct: 831  FGDGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQ 890

Query: 1114 YDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWL 935
            +D+YGEGIIITGHSELQYYLSLMNQQLPIESQ++SKLADNLNAEIVLG+VQ+AREAC WL
Sbjct: 891  FDTYGEGIIITGHSELQYYLSLMNQQLPIESQYISKLADNLNAEIVLGSVQDAREACDWL 950

Query: 934  GYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQ 755
            GYTYLYIRML+NP LYG+S +ALE D +LEERRADL+HSAA +LDRNNLVKYDRKSGYFQ
Sbjct: 951  GYTYLYIRMLKNPTLYGVSREALEADPSLEERRADLVHSAAIVLDRNNLVKYDRKSGYFQ 1010

Query: 754  VTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKL 575
            VTDLGRI+SYYYISHG+M+TYNEHLKPTMGDIELCRLFSLSEEFK+VTVREEEKMELAKL
Sbjct: 1011 VTDLGRIASYYYISHGSMATYNEHLKPTMGDIELCRLFSLSEEFKFVTVREEEKMELAKL 1070

Query: 574  LDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVL 395
            LDRVPIPVKESLEEPSAKINVLLQA ISQLKLEGLSL SDMVFITQ+AGRL+RALFEIVL
Sbjct: 1071 LDRVPIPVKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVL 1130

Query: 394  KRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQE 215
            KRGWAQLAE+AL LCKMVS+RMWS QTPLRQFKGIPN++L K+EKKD+ WERYYDLS+QE
Sbjct: 1131 KRGWAQLAEKALTLCKMVSRRMWSSQTPLRQFKGIPNDILSKVEKKDLPWERYYDLSSQE 1190

Query: 214  IIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEP 35
            I ELIR  KMG  I+R IHQFPKL+L+AH+QPITR+VLK++LTITPDF W+E+ HGYVE 
Sbjct: 1191 IGELIRYPKMGKSIHRYIHQFPKLELAAHVQPITRSVLKVDLTITPDFQWDEKYHGYVES 1250

Query: 34   FWILVEDNDGE 2
            FW++VEDNDGE
Sbjct: 1251 FWVIVEDNDGE 1261



 Score =  287 bits (735), Expect = 2e-74
 Identities = 209/726 (28%), Positives = 357/726 (49%), Gaps = 14/726 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            ++ N +Q++V+     T +N+L+ APTG+GKT  A   +L+   L +G  G       + 
Sbjct: 1355 RHFNPIQTQVFPVLYNTDDNVLVAAPTGSGKTICAEFAVLRM--LQKGEAGG------RC 1406

Query: 2080 VYVAPMKALVAEVVGNLSKRLA-DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VY+AP++AL  E + +   +      + V ELTG+ +   + +E+ QII++TPE+WD+++
Sbjct: 1407 VYIAPVEALAKERLRDWESKFGRTLGVRVVELTGETATDMKLLEKGQIIISTPERWDVLS 1466

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GPVLE IVSR       T+  IR+V LS +L N
Sbjct: 1467 RRWKQRKHVQQVSLFVVDELHLIGGEGGPVLEVIVSRMRYIGSQTENQIRIVALSTSLAN 1526

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1544
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++    
Sbjct: 1527 AKDLGDWIGAS-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVHHVK 1585

Query: 1543 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESE------KVK 1385
            K +  L+FV +RK    TA  +   A  N        G+G S  +  +E++      KVK
Sbjct: 1586 KQEPALIFVPTRKHARLTALDLVTYATVN--------GNGKSPFLHCAEADLAPFLSKVK 1637

Query: 1384 NTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKC 1205
            +  L   L  G    H G+S ++  +V  L     IQV V+T+++ W + L AH +++  
Sbjct: 1638 DEALIHALLQGIGYLHEGLSAIEQEVVTSLLTAEAIQVCVATSSMCWGMTLSAHLVVVMG 1697

Query: 1204 T*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 1025
            T  Y+  + A T+    D++QM+ RA RPQ D+ G+ +I+      +YY   + +  P+E
Sbjct: 1698 TQFYDGRENAHTDYPITDLLQMMGRASRPQVDTSGKCVILCHAPRKEYYKKFLYEPFPVE 1757

Query: 1024 SQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLE 845
            S     L D+LNAE+V+ T++N ++A  +L +T++Y R+ +NP  Y L          L 
Sbjct: 1758 SHLDHYLHDHLNAEVVVRTIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLS 1814

Query: 844  ERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMG 665
            +  ++L+ S  + L+ +  V  +         +LG I++YYYIS+ T+  ++  L     
Sbjct: 1815 DHLSELVESTLSDLESSKCVAIEDDMD-LSPLNLGMIAAYYYISYTTIELFSSSLTAKTK 1873

Query: 664  DIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQ 488
               L  + S + E+  + +R  E   + KL+      + K    +P  K N LLQA  ++
Sbjct: 1874 LKGLLEILSNASEYTRLPMRPGEDELIRKLVMHQRFSMDKPKFTDPHVKANALLQAHFAR 1933

Query: 487  LKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPL 308
              + G +L  D   I  +A RL++A+ +++   GW   A  A++L +MV++ +W   + L
Sbjct: 1934 HSVSG-NLALDQRDILIDASRLIQAMVDVISSSGWLHPALAAMELSQMVTQGLWERDSYL 1992

Query: 307  RQFKGIPNEVLIK-IEKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKL 143
             Q      ++  K  +  D   +  +DL   E  E   + +M      +I R  ++FP +
Sbjct: 1993 LQLPYFTKDLAKKCADNPDKPIQTVFDLVEMEDDERRELLQMSDAQLMEIARVCNRFPNI 2052

Query: 142  DLSAHI 125
            DL+  +
Sbjct: 2053 DLAHEV 2058


>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            isoform X1 [Glycine max]
          Length = 2183

 Score = 1561 bits (4042), Expect = 0.0
 Identities = 790/1034 (76%), Positives = 891/1034 (86%), Gaps = 7/1034 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMGGIDDEDMENADEGMNLNVQDIDAYWLQRKITLAHS 2903
            +VQD E ED+D+  + + S AMQMGGIDDEDME  +EGM LNVQDIDAYWLQRKI+ A  
Sbjct: 237  IVQDEEEEDEDVT-EPNSSGAMQMGGIDDEDMEEGNEGMGLNVQDIDAYWLQRKISQAFE 295

Query: 2902 SAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRL 2723
              IDPQ  Q+LAEEVL+ILA +GD R+VEN L+  L+F+KF LIK LLRNR KIVWCTRL
Sbjct: 296  QQIDPQHCQKLAEEVLKILA-EGDDREVENKLLFHLEFDKFSLIKFLLRNRLKIVWCTRL 354

Query: 2722 ARSEDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXX 2543
            AR++DQEER+RIE EM G   L+ ILEQLHATRA+AKERQKNLE+S+REEAR+L      
Sbjct: 355  ARAQDQEERERIEEEMKGTE-LQPILEQLHATRASAKERQKNLEKSIREEARRLKDDTGG 413

Query: 2542 XXXXXXXXXXXGM------ENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRST 2381
                        +      E+ WLKGQRQ+LDL+SI+F QGG  MA KKC+LP GS+R  
Sbjct: 414  DGDKESRDRSRRVVADRDGESGWLKGQRQMLDLDSIAFAQGGFFMAKKKCDLPDGSYRHL 473

Query: 2380 RKGYEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAEN 2201
             KGYEE+H       PL   E L+KI+ MP+W QPAF GM  LNRVQS+VYETALF  +N
Sbjct: 474  SKGYEEIHVPALKAKPLDPNEKLVKISSMPDWAQPAFKGMTQLNRVQSKVYETALFQPDN 533

Query: 2200 LLLCAPTGAGKTNVAVLTILQQIGLNRGP-DGELDLSSFKIVYVAPMKALVAEVVGNLSK 2024
            LLLCAPTGAGKTNVAVLTILQQI  +R P DG +D S++KIVYVAPMKALVAEVVGNLS 
Sbjct: 534  LLLCAPTGAGKTNVAVLTILQQIARHRNPKDGSIDHSAYKIVYVAPMKALVAEVVGNLSN 593

Query: 2023 RLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXX 1844
            RL DY++ V+EL+GDQSL+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK       
Sbjct: 594  RLQDYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEI 653

Query: 1843 XXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFD 1664
                DNRGPVLESIV+RTVRQIETT++ IRLVGLSATLPNYEDVALFLRVD  KGLFYFD
Sbjct: 654  HLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFD 713

Query: 1663 NSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARH 1484
            NSYRP PLSQQY+G+TV+KPLQRFQLMNDICYEKV++ AGKHQVL+FVHSRKETAKTAR 
Sbjct: 714  NSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARA 773

Query: 1483 IRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLV 1304
            IRD ALANDT+GRF+K D ASREILH+ ++ VK+ DLKD+LPYGFAIHHAGM+R D  LV
Sbjct: 774  IRDTALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLV 833

Query: 1303 EDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAG 1124
            EDLF D H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAG
Sbjct: 834  EDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAG 893

Query: 1123 RPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREAC 944
            RPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC
Sbjct: 894  RPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREAC 953

Query: 943  TWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSG 764
             W+GYTYLY+RMLRNP LYG++ D L +D TLEERRADLIH+AATILDRNNLVKYDRKSG
Sbjct: 954  NWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSG 1013

Query: 763  YFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMEL 584
            YFQVTDLGRI+SYYYI+HG++STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMEL
Sbjct: 1014 YFQVTDLGRIASYYYITHGSISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMEL 1073

Query: 583  AKLLDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFE 404
            AKLLDRVPIP+KESLEEPSAKINVLLQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFE
Sbjct: 1074 AKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFE 1133

Query: 403  IVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLS 224
            IVLKRGWAQLAE+AL LCKMV+KRMWSVQTPLRQF GIP+++L K+EKKD++WERYYDLS
Sbjct: 1134 IVLKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPSDLLTKLEKKDLAWERYYDLS 1193

Query: 223  AQEIIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGY 44
            +QEI ELIR  KMG  +++ IHQFPKL+L+AH+QPITRTVL++ELTITPDF W++++HGY
Sbjct: 1194 SQEIGELIRAPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGY 1253

Query: 43   VEPFWILVEDNDGE 2
            VEPFW++VEDNDGE
Sbjct: 1254 VEPFWVIVEDNDGE 1267



 Score =  284 bits (727), Expect = 2e-73
 Identities = 210/720 (29%), Positives = 351/720 (48%), Gaps = 8/720 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     + PD     S  ++
Sbjct: 1361 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKWPD-----SVMRV 1413

Query: 2080 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VYVAP+++L  E   +  K+      + V ELTG+ +   + +E+ QII++TPEKWD ++
Sbjct: 1414 VYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALS 1473

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GP+LE +VSR        +  IR+V LS +L N
Sbjct: 1474 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQVENKIRVVALSTSLAN 1533

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1544
             +D+  ++    S GLF F    RP PL     G+ +     R Q M    Y  ++  A 
Sbjct: 1534 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAMTKPTYTAIVQHAK 1592

Query: 1543 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1367
              +  LVFV +RK    TA  +   + A+     F+     S E L    +K+ +  LK 
Sbjct: 1593 NGKPALVFVPTRKHVRLTAVDLITYSGADSGEKPFLL---RSAEELEPFLDKITDEMLKV 1649

Query: 1366 MLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNP 1187
             L  G    H G++ +D  +V  LF    IQV V  +++ W V L AH +++  T  Y+ 
Sbjct: 1650 TLREGVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDG 1709

Query: 1186 EKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 1007
             + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1710 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1769

Query: 1006 LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 827
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1770 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1826

Query: 826  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 647
            + +  + L+    +  +       + +LG I+SYYYIS+ T+  ++  +        L  
Sbjct: 1827 VENTLSDLEAGKCITIEDDMELAPL-NLGMIASYYYISYTTIERFSSSVTSKTKMKGLLE 1885

Query: 646  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 470
            + S + E+  + +R  E+  + KL++      +   + +P  K N LLQA  S+ +  G 
Sbjct: 1886 ILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKTNALLQAHFSR-QFVGG 1944

Query: 469  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGI 290
            +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ MW   + L Q    
Sbjct: 1945 NLALDQKEVLLSANRLLQAMVDVISSNGWLGLALLAMEVSQMVTQGMWERDSMLLQLPHF 2004

Query: 289  PNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLSAHI 125
              ++  K  E    S E  +DL   E  E   +  M       I R  ++FP +DLS  +
Sbjct: 2005 TKDLAKKCQENPGKSIETVFDLLEMEDNERQELLGMSDSQLLDIARFCNRFPNIDLSYEV 2064


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score = 1555 bits (4025), Expect = 0.0
 Identities = 787/1034 (76%), Positives = 890/1034 (86%), Gaps = 7/1034 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMGGIDDEDMENADEGMNLNVQDIDAYWLQRKITLAHS 2903
            +VQD E +D+D+  + + S AMQMGGIDDEDME  +EGM LNVQDIDAYWLQRKI+ A  
Sbjct: 237  IVQDEEEDDEDVA-EPNGSGAMQMGGIDDEDMEEGNEGMGLNVQDIDAYWLQRKISQAFE 295

Query: 2902 SAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRL 2723
              IDPQ  Q+LAEEVL+ILA +GD R+VEN L+  L+F+KF LIK LLRNR KIVWCTRL
Sbjct: 296  QQIDPQHCQKLAEEVLKILA-EGDDREVENKLLFHLEFDKFSLIKFLLRNRLKIVWCTRL 354

Query: 2722 ARSEDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXX 2543
            AR++DQEER++IE EM G   L+ ILEQLHATRA+AKERQKNLE+S+REEAR+L      
Sbjct: 355  ARAQDQEEREKIEEEMKGTE-LQPILEQLHATRASAKERQKNLEKSIREEARRLKDDTGG 413

Query: 2542 XXXXXXXXXXXGM------ENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRST 2381
                               E+ WLKGQRQ+LDL+SI+F QGG  MA KKC+LP GS+R  
Sbjct: 414  DGDKESRDRSRRGVADRDGESGWLKGQRQMLDLDSIAFTQGGFFMAKKKCDLPDGSYRHL 473

Query: 2380 RKGYEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAEN 2201
             KGYEE+H       PL   E L+KI+ MP+W QPAF GM  LNRVQS+VYETALF  +N
Sbjct: 474  SKGYEEIHVPALKAKPLDPNEKLVKISSMPDWAQPAFKGMTQLNRVQSKVYETALFKPDN 533

Query: 2200 LLLCAPTGAGKTNVAVLTILQQIGLNRGP-DGELDLSSFKIVYVAPMKALVAEVVGNLSK 2024
            LLLCAPTGAGKTNVAVLTILQQI  +R P DG +D S++KIVYVAPMKALVAEVVGNLS 
Sbjct: 534  LLLCAPTGAGKTNVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSN 593

Query: 2023 RLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXX 1844
            RL +Y++ V+EL+GDQSL+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK       
Sbjct: 594  RLQEYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEI 653

Query: 1843 XXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFD 1664
                DNRGPVLESIV+RTVRQIETT++ IRLVGLSATLPNYEDVALFLRVD  KGLFYFD
Sbjct: 654  HLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFD 713

Query: 1663 NSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARH 1484
            NSYRP PLSQQY+G+TV+KPLQRFQLMNDICYEKV++ AGKHQVL+FVHSRKETAKTAR 
Sbjct: 714  NSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARA 773

Query: 1483 IRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLV 1304
            IRDAALANDT+GRF+K D ASREILH+ ++ VK+ DLKD+LPYGFAIHHAGM+R D  LV
Sbjct: 774  IRDAALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLV 833

Query: 1303 EDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAG 1124
            EDLF D H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAG
Sbjct: 834  EDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAG 893

Query: 1123 RPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREAC 944
            RPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC
Sbjct: 894  RPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREAC 953

Query: 943  TWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSG 764
             W+GYTYLY+RMLRNP LYG++ D L +D TLEERRADLIH+AATILDRNNLVKYDRKSG
Sbjct: 954  NWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSG 1013

Query: 763  YFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMEL 584
            YFQVTDLGRI+SYYYI+HG++STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMEL
Sbjct: 1014 YFQVTDLGRIASYYYITHGSISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMEL 1073

Query: 583  AKLLDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFE 404
            AKLLDRVPIP+KESLEEPSAKINVLLQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFE
Sbjct: 1074 AKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFE 1133

Query: 403  IVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLS 224
            IVLKRGWAQLAE+AL LCKM +KRMWSVQTPLRQF GIP+++L K+EKKD++WERYYDLS
Sbjct: 1134 IVLKRGWAQLAEKALNLCKMGTKRMWSVQTPLRQFNGIPSDLLTKLEKKDLAWERYYDLS 1193

Query: 223  AQEIIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGY 44
            +QEI ELIR  KMG  +++ IHQFPKL+L+AH+QPITRTVL++ELTITPDF W++++HGY
Sbjct: 1194 SQEIGELIRAPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGY 1253

Query: 43   VEPFWILVEDNDGE 2
            VEPFW++VEDNDGE
Sbjct: 1254 VEPFWVIVEDNDGE 1267



 Score =  286 bits (733), Expect = 3e-74
 Identities = 218/770 (28%), Positives = 369/770 (47%), Gaps = 21/770 (2%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     +GPD     S  ++
Sbjct: 1361 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----SVMRV 1413

Query: 2080 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VYVAP++AL  E   +  ++      + V ELTG+ +   + +E+ QII++TPEKWD ++
Sbjct: 1414 VYVAPVEALAKERYRDWERKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALS 1473

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GP+LE +VSR        +   R+V LS +L N
Sbjct: 1474 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQVENKSRIVALSTSLAN 1533

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1544
             +D+  ++    S GLF F    RP PL     G+ +     R Q M    Y  ++  A 
Sbjct: 1534 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGIDITNFEARMQAMTKPTYTAIVQHAK 1592

Query: 1543 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1367
              +  L+FV +RK    TA  +   + A+     F+     S E L    +K+ +  LK 
Sbjct: 1593 NGKPALIFVPTRKHVRLTAVDMITYSGADSGEKPFLL---RSAEELEPFLDKITDEMLKV 1649

Query: 1366 MLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNP 1187
             L  G    H G++ +D  +V  LF    IQV V  +++ W V L AH +++  T  Y+ 
Sbjct: 1650 TLREGVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNSSMCWGVTLLAHLVVVMGTQYYDG 1709

Query: 1186 EKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 1007
             + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1710 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1769

Query: 1006 LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 827
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1770 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1826

Query: 826  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 647
            + +  + L+    +  +       + +LG I+SYYYIS+ T+  ++  +        L  
Sbjct: 1827 VENTLSDLEAGKCITIEDDMELAPL-NLGMIASYYYISYTTIERFSSSVTSKTKMKGLLE 1885

Query: 646  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 470
            + S + E+  + +R  E+  + KL++      +   + +P  K N LLQA  S+ +  G 
Sbjct: 1886 ILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSR-QFVGG 1944

Query: 469  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGI 290
            +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ MW   + L Q    
Sbjct: 1945 NLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHF 2004

Query: 289  PNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLSAHI 125
              ++  K  E    S E  +DL   E  E  ++  M       I R  ++FP +DLS  +
Sbjct: 2005 TKDLAKKCQENPGKSIETVFDLLEMEDEERQKLLGMSDLQLLDIARFCNRFPNIDLSYEV 2064

Query: 124  QPITRT----VLKMELTITPDFNWEEQV---------HGYVEPFWILVED 14
                      V+ + +T+  DF    +V             E +W++V D
Sbjct: 2065 LDSDNVRAGEVVTVLVTLERDFEGRTEVGPVDAPRYPKAKEEGWWLIVGD 2114


>ref|XP_006648214.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Oryza brachyantha]
          Length = 2203

 Score = 1552 bits (4018), Expect = 0.0
 Identities = 775/1027 (75%), Positives = 900/1027 (87%), Gaps = 3/1027 (0%)
 Frame = -3

Query: 3073 DVESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSA 2897
            D++ +D+D   +++   AMQMGG +DD+DM+N++EGM +NVQDIDAYWLQRK++ A+   
Sbjct: 270  DLDEDDEDDMPESNAPGAMQMGGELDDDDMQNSNEGMTINVQDIDAYWLQRKVSQAYED- 328

Query: 2896 IDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLAR 2717
            IDPQ SQ+LAEE+L+I+A +GD RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR
Sbjct: 329  IDPQHSQKLAEEILKIIA-EGDDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLAR 387

Query: 2716 SEDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXX 2537
            +EDQE+RK+IE +M  +  L  ILEQLHATRA+AKERQKNLE+S+R+EA++L        
Sbjct: 388  AEDQEQRKKIEEDMMANPTLTPILEQLHATRASAKERQKNLEKSIRDEAKRLTKSENAGI 447

Query: 2536 XXXXXXXXXG--MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEE 2363
                        ME+ WLKGQRQLLDL+S+SFHQGGLLMANKKCELP GSFR+  KGYEE
Sbjct: 448  DGARDRRAVDRDMESGWLKGQRQLLDLDSLSFHQGGLLMANKKCELPPGSFRTPHKGYEE 507

Query: 2362 VHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAP 2183
            VH       P   GE ++KI+DMPEW QPAF GM  LNRVQS+VY+TALF  +N+LLCAP
Sbjct: 508  VHVPALKAKPYEAGEKIVKISDMPEWAQPAFAGMTQLNRVQSKVYDTALFKPDNILLCAP 567

Query: 2182 TGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNI 2003
            TGAGKTNVAVLTILQQIGL+   DGE D + +KIVYVAPMKALVAEVVGNLS RL++Y +
Sbjct: 568  TGAGKTNVAVLTILQQIGLHM-KDGEFDNTKYKIVYVAPMKALVAEVVGNLSARLSEYKV 626

Query: 2002 TVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNR 1823
            TV+EL+GDQ+L++QQI++TQIIVTTPEKWDI+TRKSGDRTYTQ+VK           DNR
Sbjct: 627  TVRELSGDQNLTKQQIDDTQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNR 686

Query: 1822 GPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCP 1643
            GPVLESIVSRTVRQIETT+E IRLVGLSATLPNYEDVA+FLRV +S GLF+FDNSYRPCP
Sbjct: 687  GPVLESIVSRTVRQIETTKEHIRLVGLSATLPNYEDVAVFLRV-RSDGLFHFDNSYRPCP 745

Query: 1642 LSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALA 1463
            L+QQYIG+TVRKPLQRFQLMN+ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALA
Sbjct: 746  LAQQYIGITVRKPLQRFQLMNEICYEKVIASAGKHQVLIFVHSRKETAKTARAIRDTALA 805

Query: 1462 NDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDR 1283
            NDT+ RF+K + AS+EIL S+++ VK++DLKD+LPYGFAIHHAG++RVD  LVE+LF D+
Sbjct: 806  NDTLNRFLKDESASQEILGSQADLVKSSDLKDLLPYGFAIHHAGLARVDRELVEELFADK 865

Query: 1282 HIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSY 1103
            HIQVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQYD++
Sbjct: 866  HIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTH 925

Query: 1102 GEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTY 923
            GEGIIITGHSELQYYLSLMNQQLPIESQF+SKLAD LNAEIVLGT+QNAREAC+WLGYTY
Sbjct: 926  GEGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTIQNAREACSWLGYTY 985

Query: 922  LYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDL 743
            LYIRMLRNP LYGL AD +E D TL+ERRADL+HSAA +LDRNNL+KYDRK+GYFQVTDL
Sbjct: 986  LYIRMLRNPTLYGLPADIMETDKTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDL 1045

Query: 742  GRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRV 563
            GRI+SYYYISHGT+STYNE+LKPTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLLDRV
Sbjct: 1046 GRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRV 1105

Query: 562  PIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGW 383
            PIPVKESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+I Q+AGRLLRALFEI+LKRGW
Sbjct: 1106 PIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIILKRGW 1165

Query: 382  AQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIEL 203
            AQLAE+AL LCKMV K+MW+VQTPLRQF GIP E+L+K+EKK+++WERYYDLS+QEI EL
Sbjct: 1166 AQLAEKALNLCKMVDKQMWNVQTPLRQFPGIPKEILMKLEKKELAWERYYDLSSQEIGEL 1225

Query: 202  IRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWIL 23
            IR  KMG Q+++CIHQ PKL+LSAH+QPITRTVL  ELTITPDF W+++VHGYVEPFW++
Sbjct: 1226 IRFPKMGRQLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVHGYVEPFWVI 1285

Query: 22   VEDNDGE 2
            VEDNDGE
Sbjct: 1286 VEDNDGE 1292



 Score =  288 bits (736), Expect = 1e-74
 Identities = 207/724 (28%), Positives = 360/724 (49%), Gaps = 7/724 (0%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            +   K+ N +Q++V+     T +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1382 YSAFKHFNPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAILRNH--QKAVSGE---S 1436

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1913
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1437 NMRVVYIAPIEALAKERYRDWERKFREF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1495

Query: 1912 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1733
             ++R+   R   Q V              +G VLE  VSR  R        IR+V LSA+
Sbjct: 1496 ALSRRWKQRKQVQQVSLFIVDELHLIASEKGHVLEVTVSRMRRIASHIGSNIRIVALSAS 1555

Query: 1732 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1553
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1556 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1614

Query: 1552 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1376
             A   +  LVFV +RK    TA  +   + A      F+ G   S + + + +  V +  
Sbjct: 1615 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGGGTPFLLG---SEDEMETFTGSVSDET 1671

Query: 1375 LKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*I 1196
            LK  L  G    H G+S +D  +V  LF    IQV V+++ + W  +LPAH +++  T  
Sbjct: 1672 LKYTLKCGVGYLHEGLSDLDQEVVTQLFLGGRIQVCVASSTVCWGRSLPAHLVVVMGTQY 1731

Query: 1195 YNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 1016
            Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1732 YDGRENAHTDYPIADLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1791

Query: 1015 VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 836
               L D++NAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1792 HHFLHDHMNAEVVVGVIENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHL 1848

Query: 835  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 656
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1849 SELVETVLNDLESSKCVAIE-EDMYLKALNLGLIASYYYISYTTIERFSSMLTQKTKMKG 1907

Query: 655  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 479
            L  + + + E+  +  R  E+  + KL+      + K    +P  K N LLQA  S+  +
Sbjct: 1908 LLEILASASEYAELPSRPGEENFIEKLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTI 1967

Query: 478  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQF 299
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW   + L Q 
Sbjct: 1968 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMELSQMVTQGMWDRDSVLLQL 2026

Query: 298  KGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
                 E+  +  E +  + E  +DL+   I E+  + ++       I     +FP +D++
Sbjct: 2027 PHFTKELARRCQENEGKAIESIFDLAEMSIDEMRDLLQLSNSQLQDIIGFFKRFPNVDMA 2086

Query: 133  AHIQ 122
              ++
Sbjct: 2087 YEVR 2090


>gb|EEE56150.1| hypothetical protein OsJ_05035 [Oryza sativa Japonica Group]
          Length = 2238

 Score = 1550 bits (4014), Expect = 0.0
 Identities = 779/1025 (76%), Positives = 897/1025 (87%), Gaps = 3/1025 (0%)
 Frame = -3

Query: 3067 ESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSAID 2891
            E EDDDL  +++   AMQMGG +DD+DM+N++EG+ +NVQDIDAYWLQRK++ A+   ID
Sbjct: 308  EDEDDDLP-ESNAPGAMQMGGELDDDDMQNSNEGLTINVQDIDAYWLQRKVSQAYED-ID 365

Query: 2890 PQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSE 2711
            PQ SQ+LAEE+L+I+A +GD RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+E
Sbjct: 366  PQHSQKLAEEILKIIA-EGDDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARAE 424

Query: 2710 DQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXX 2531
            DQE+RK+IE +M G+  L  ILEQLHATRA+AKERQKNLE+S+R+EA++L          
Sbjct: 425  DQEQRKKIEEDMMGNPTLTPILEQLHATRASAKERQKNLEKSIRDEAKRLTKSENTGIDG 484

Query: 2530 XXXXXXXG--MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVH 2357
                      ME+ WLKGQRQLLDL+S+SFHQGGLLMANKKCELP GSFR+  KGYEEVH
Sbjct: 485  ARDRRAVDRDMESGWLKGQRQLLDLDSLSFHQGGLLMANKKCELPPGSFRTPHKGYEEVH 544

Query: 2356 XXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTG 2177
                   P   GE ++KI+DMPEW QPAF  M  LNRVQS+VYETALF  +N+LLCAPTG
Sbjct: 545  VPALKAKPYETGEKIVKISDMPEWAQPAFAKMTQLNRVQSKVYETALFKPDNILLCAPTG 604

Query: 2176 AGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITV 1997
            AGKTNVAVLTILQQIGL+   DG  D + +KIVYVAPMKALVAEVVGNLS RL+ Y ITV
Sbjct: 605  AGKTNVAVLTILQQIGLHM-KDGVFDNTKYKIVYVAPMKALVAEVVGNLSARLSAYGITV 663

Query: 1996 KELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGP 1817
            +EL+GDQ+L++QQI+ETQIIVTTPEKWDI+TRKSGDRTYTQ+VK           DNRGP
Sbjct: 664  RELSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGP 723

Query: 1816 VLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLS 1637
            VLESIVSRTVRQIETT+E IRLVGLSATLPNYEDVA+FLRV +S GLF+FDNSYRPCPL+
Sbjct: 724  VLESIVSRTVRQIETTKEHIRLVGLSATLPNYEDVAVFLRV-RSDGLFHFDNSYRPCPLA 782

Query: 1636 QQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALAND 1457
            QQYIG+TVRKPLQRFQLMN+ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALAND
Sbjct: 783  QQYIGITVRKPLQRFQLMNEICYEKVMASAGKHQVLIFVHSRKETAKTARAIRDTALAND 842

Query: 1456 TIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHI 1277
            T+ RF+K D AS+EIL S++E VK++DLKD+LPYGFAIHHAG++RVD  LVE+LF D+HI
Sbjct: 843  TLNRFLKDDSASQEILGSQAELVKSSDLKDLLPYGFAIHHAGLARVDRELVEELFADKHI 902

Query: 1276 QVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGE 1097
            QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQYD++GE
Sbjct: 903  QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGE 962

Query: 1096 GIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLY 917
            GII+TGHSELQYYLSLMNQQLPIESQF+S+LAD LNAEIVLGT+QNAREAC+WLGYTYLY
Sbjct: 963  GIILTGHSELQYYLSLMNQQLPIESQFISRLADQLNAEIVLGTIQNAREACSWLGYTYLY 1022

Query: 916  IRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGR 737
            IRMLRNP LYGL AD +E D TL+ERRADL+HSAA +LDRNNL+KYDRK+GYFQVTDLGR
Sbjct: 1023 IRMLRNPTLYGLPADIMETDKTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDLGR 1082

Query: 736  ISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPI 557
            I+SYYYISHGT+STYNE+LKPTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLLDRVPI
Sbjct: 1083 IASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPI 1142

Query: 556  PVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQ 377
            PVKESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGWAQ
Sbjct: 1143 PVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQ 1202

Query: 376  LAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELIR 197
            LAE+AL LCKM+ K+MW+VQTPLRQF GIP E+L+K+EKK+++WERYYDLS+QEI ELIR
Sbjct: 1203 LAEKALNLCKMIDKQMWNVQTPLRQFPGIPKEILMKLEKKELAWERYYDLSSQEIGELIR 1262

Query: 196  VKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWILVE 17
              KMG Q+++CIHQ PKL+LSAH+QPITRTVL  ELTITPDF W+++VHGYVEPFW++VE
Sbjct: 1263 FPKMGRQLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVHGYVEPFWVIVE 1322

Query: 16   DNDGE 2
            DNDGE
Sbjct: 1323 DNDGE 1327



 Score =  284 bits (727), Expect = 2e-73
 Identities = 206/724 (28%), Positives = 359/724 (49%), Gaps = 7/724 (0%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            +   K+ N +Q++V+     T +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1417 YSAFKHFNPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAILRNH--QKAVSGE---S 1471

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1913
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1472 NMRVVYIAPIEALAKERYRDWEQKFGEF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1530

Query: 1912 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1733
             ++R+   R   Q V              +G VLE IVSR  R        IR+V LSA+
Sbjct: 1531 ALSRRWKQRKQVQQVSLFIVDELHLIGSEKGHVLEVIVSRMRRIASHIGSNIRIVALSAS 1590

Query: 1732 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1553
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1591 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1649

Query: 1552 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1376
             A   +  LVFV +RK    TA  +   + A      F+ G   S + + + +  + +  
Sbjct: 1650 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGGGTPFLLG---SEDEMDAFTGGISDET 1706

Query: 1375 LKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*I 1196
            LK  L  G    H G+S ++  +V  LF    IQV V+++ + W  +LPAH +++  T  
Sbjct: 1707 LKYTLKCGVGYLHEGLSDLEQEVVTQLFLGGRIQVCVASSTVCWGRSLPAHLVVVMGTQY 1766

Query: 1195 YNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 1016
            Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1767 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1826

Query: 1015 VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 836
               L D++NAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1827 HHFLHDHMNAEVVVGVIENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHL 1883

Query: 835  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 656
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1884 SELVETVLNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKMKG 1942

Query: 655  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 479
            L  + + + E+  +  R  E+  + KL+      + K    +P  K N LLQA  S+  +
Sbjct: 1943 LLEILASASEYAELPSRPGEEDFIEKLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTI 2002

Query: 478  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQF 299
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW   + L Q 
Sbjct: 2003 LG-NLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMELSQMVTQGMWDRDSVLLQL 2061

Query: 298  KGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
                 E+  +  E +    E  +DL+   I E+  + +        I     +FP +D++
Sbjct: 2062 PHFTKELARRCQENEGRPIESIFDLAEMSIDEMRDLLQQSNPQLQDIIEFFKRFPNVDMA 2121

Query: 133  AHIQ 122
              ++
Sbjct: 2122 YEVR 2125


>gb|EAY84119.1| hypothetical protein OsI_05501 [Oryza sativa Indica Group]
          Length = 2177

 Score = 1550 bits (4014), Expect = 0.0
 Identities = 779/1025 (76%), Positives = 897/1025 (87%), Gaps = 3/1025 (0%)
 Frame = -3

Query: 3067 ESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSAID 2891
            E EDDDL  +++   AMQMGG +DD+DM+N++EG+ +NVQDIDAYWLQRK++ A+   ID
Sbjct: 247  EDEDDDLP-ESNAPGAMQMGGELDDDDMQNSNEGLTINVQDIDAYWLQRKVSQAYED-ID 304

Query: 2890 PQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSE 2711
            PQ SQ+LAEE+L+I+A +GD RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+E
Sbjct: 305  PQHSQKLAEEILKIIA-EGDDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARAE 363

Query: 2710 DQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXX 2531
            DQE+RK+IE +M G+  L  ILEQLHATRA+AKERQKNLE+S+R+EA++L          
Sbjct: 364  DQEQRKKIEEDMMGNPTLTPILEQLHATRASAKERQKNLEKSIRDEAKRLTKSENTGIDG 423

Query: 2530 XXXXXXXG--MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVH 2357
                      ME+ WLKGQRQLLDL+S+SFHQGGLLMANKKCELP GSFR+  KGYEEVH
Sbjct: 424  ARDRRAVDRDMESGWLKGQRQLLDLDSLSFHQGGLLMANKKCELPPGSFRTPHKGYEEVH 483

Query: 2356 XXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTG 2177
                   P   GE ++KI+DMPEW QPAF  M  LNRVQS+VYETALF  +N+LLCAPTG
Sbjct: 484  VPALKAKPYETGEKIVKISDMPEWAQPAFAKMTQLNRVQSKVYETALFKPDNILLCAPTG 543

Query: 2176 AGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITV 1997
            AGKTNVAVLTILQQIGL+   DG  D + +KIVYVAPMKALVAEVVGNLS RL+ Y ITV
Sbjct: 544  AGKTNVAVLTILQQIGLHM-KDGVFDNTKYKIVYVAPMKALVAEVVGNLSARLSAYGITV 602

Query: 1996 KELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGP 1817
            +EL+GDQ+L++QQI+ETQIIVTTPEKWDI+TRKSGDRTYTQ+VK           DNRGP
Sbjct: 603  RELSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGP 662

Query: 1816 VLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLS 1637
            VLESIVSRTVRQIETT+E IRLVGLSATLPNYEDVA+FLRV +S GLF+FDNSYRPCPL+
Sbjct: 663  VLESIVSRTVRQIETTKEHIRLVGLSATLPNYEDVAVFLRV-RSDGLFHFDNSYRPCPLA 721

Query: 1636 QQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALAND 1457
            QQYIG+TVRKPLQRFQLMN+ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD ALAND
Sbjct: 722  QQYIGITVRKPLQRFQLMNEICYEKVMASAGKHQVLIFVHSRKETAKTARAIRDTALAND 781

Query: 1456 TIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHI 1277
            T+ RF+K D AS+EIL S++E VK++DLKD+LPYGFAIHHAG++RVD  LVE+LF D+HI
Sbjct: 782  TLNRFLKDDSASQEILGSQAELVKSSDLKDLLPYGFAIHHAGLARVDRELVEELFADKHI 841

Query: 1276 QVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGE 1097
            QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQYD++GE
Sbjct: 842  QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGE 901

Query: 1096 GIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLY 917
            GII+TGHSELQYYLSLMNQQLPIESQF+S+LAD LNAEIVLGT+QNAREAC+WLGYTYLY
Sbjct: 902  GIILTGHSELQYYLSLMNQQLPIESQFISRLADQLNAEIVLGTIQNAREACSWLGYTYLY 961

Query: 916  IRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGR 737
            IRMLRNP LYGL AD +E D TL+ERRADL+HSAA +LDRNNL+KYDRK+GYFQVTDLGR
Sbjct: 962  IRMLRNPTLYGLPADIMETDKTLDERRADLVHSAANLLDRNNLIKYDRKTGYFQVTDLGR 1021

Query: 736  ISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPI 557
            I+SYYYISHGT+STYNE+LKPTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLLDRVPI
Sbjct: 1022 IASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLLDRVPI 1081

Query: 556  PVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQ 377
            PVKESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGWAQ
Sbjct: 1082 PVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQ 1141

Query: 376  LAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELIR 197
            LAE+AL LCKM+ K+MW+VQTPLRQF GIP E+L+K+EKK+++WERYYDLS+QEI ELIR
Sbjct: 1142 LAEKALNLCKMIDKQMWNVQTPLRQFPGIPKEILMKLEKKELAWERYYDLSSQEIGELIR 1201

Query: 196  VKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWILVE 17
              KMG Q+++CIHQ PKL+LSAH+QPITRTVL  ELTITPDF W+++VHGYVEPFW++VE
Sbjct: 1202 FPKMGRQLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVHGYVEPFWVIVE 1261

Query: 16   DNDGE 2
            DNDGE
Sbjct: 1262 DNDGE 1266



 Score =  284 bits (727), Expect = 2e-73
 Identities = 206/724 (28%), Positives = 359/724 (49%), Gaps = 7/724 (0%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            +   K+ N +Q++V+     T +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1356 YSAFKHFNPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEFAILRNH--QKAVSGE---S 1410

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1913
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1411 NMRVVYIAPIEALAKERYRDWEQKFGEF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1469

Query: 1912 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1733
             ++R+   R   Q V              +G VLE IVSR  R        IR+V LSA+
Sbjct: 1470 ALSRRWKQRKQVQQVSLFIVDELHLIGSEKGHVLEVIVSRMRRIASHIGSNIRIVALSAS 1529

Query: 1732 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1553
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1530 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1588

Query: 1552 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1376
             A   +  LVFV +RK    TA  +   + A      F+ G   S + + + +  + +  
Sbjct: 1589 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGGGTPFLLG---SEDEMDAFTGGISDET 1645

Query: 1375 LKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*I 1196
            LK  L  G    H G+S ++  +V  LF    IQV V+++ + W  +LPAH +++  T  
Sbjct: 1646 LKYTLKCGVGYLHEGLSDLEQEVVTQLFLSGRIQVCVASSTVCWGRSLPAHLVVVMGTQY 1705

Query: 1195 YNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 1016
            Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1706 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1765

Query: 1015 VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 836
               L D++NAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1766 HHFLHDHMNAEVVVGVIENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHL 1822

Query: 835  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 656
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1823 SELVETVLNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKMKG 1881

Query: 655  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 479
            L  + + + E+  +  R  E+  + KL+      + K    +P  K N LLQA  S+  +
Sbjct: 1882 LLEILASASEYAELPSRPGEEDFIEKLVRHQRFSIEKPRYGDPHVKANALLQAHFSRHTI 1941

Query: 478  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQF 299
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW   + L Q 
Sbjct: 1942 LG-NLAADQREILLSAHRLLQAMVDVISSNGWLTLALNAMELSQMVTQGMWDRDSVLLQL 2000

Query: 298  KGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
                 E+  +  E +    E  +DL+   I E+  + +        I     +FP +D++
Sbjct: 2001 PHFTKELARRCQENEGRPIESIFDLAEMSIDEMRDLLQQSNPQLQDIIEFFKRFPNVDMA 2060

Query: 133  AHIQ 122
              ++
Sbjct: 2061 YEVR 2064


>gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
            [Theobroma cacao]
          Length = 2176

 Score = 1548 bits (4009), Expect = 0.0
 Identities = 786/1030 (76%), Positives = 890/1030 (86%), Gaps = 3/1030 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAH 2906
            MVQ+ E +DDD  G  + + AMQMGG IDD+DM  A+EGM+LNVQDIDAYWLQRKI+ A+
Sbjct: 233  MVQEDEDDDDD--GVENGAGAMQMGGGIDDDDMHEANEGMSLNVQDIDAYWLQRKISQAY 290

Query: 2905 SSAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTR 2726
               IDPQ+ Q+LAEEVL+ILA +GD R+VE  L+  L F+KF LIK LLRNR K+VWCTR
Sbjct: 291  DQQIDPQQCQKLAEEVLKILA-EGDDREVETKLLVHLQFDKFSLIKYLLRNRLKVVWCTR 349

Query: 2725 LARSEDQEERKRIEYEMSGDGV-LRAILEQLHATRATAKERQKNLERSLREEARKLXXXX 2549
            LAR+EDQEERK+IE EM   G  L AILEQLHATRATAKERQKNLE+S+REEAR+L    
Sbjct: 350  LARAEDQEERKKIEEEMMSLGPDLAAILEQLHATRATAKERQKNLEKSIREEARRLKDES 409

Query: 2548 XXXXXXXXXXXXXG-MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKG 2372
                            +  WLKGQRQLLDL+S++F QGGLLMANKKCELP GS++   KG
Sbjct: 410  VGDGDRDRRGLADRDTDGGWLKGQRQLLDLDSLAFEQGGLLMANKKCELPMGSYKHHAKG 469

Query: 2371 YEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLL 2192
            YEEVH       PL   E L+KI++MPEW QPAF GM+ LNRVQS+VYETALF A+N+LL
Sbjct: 470  YEEVHVPAPKSKPLESDERLVKISEMPEWAQPAFKGMQQLNRVQSKVYETALFAADNILL 529

Query: 2191 CAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLAD 2012
            CAPTGAGKTNVAVLTILQQ+ LN   DG ++ S++KIVYVAPMKALVAEVVGNLS RL  
Sbjct: 530  CAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSHRLEA 589

Query: 2011 YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXX 1832
            Y +TV+EL+GDQ+L+RQQI+ETQIIVTTPEKWDIITRKSGDRTYTQLVK           
Sbjct: 590  YGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLH 649

Query: 1831 DNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYR 1652
            DNRGPVLESIV+RTVRQIETT+E IRLVGLSATLPNYEDVALFLRVD  +GLF+FDNSYR
Sbjct: 650  DNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKEGLFHFDNSYR 709

Query: 1651 PCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDA 1472
            P PLSQQYIG+TV+KPLQRFQLMNDICYEKV++ AGKHQVL+FVHSRKET KTAR +RD 
Sbjct: 710  PVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETTKTARAVRDT 769

Query: 1471 ALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLF 1292
            ALANDT+ RF+K D ASREIL S ++ VK+ DLKD+LPYGFAIHHAG++R D  +VE+LF
Sbjct: 770  ALANDTLSRFLKEDAASREILQSHTDMVKSNDLKDLLPYGFAIHHAGLARTDRQIVEELF 829

Query: 1291 GDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQY 1112
             D H+QVLVSTA LAW VNLPAHT+IIK T IY+PEKGAWTELSPLDVMQML RAGRPQY
Sbjct: 830  ADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQY 889

Query: 1111 DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLG 932
            DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC W+ 
Sbjct: 890  DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIT 949

Query: 931  YTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQV 752
            YTYLY+RMLRNP LYGL AD L +D TL+ERRADLIHSAATILD+NNLVKYDRKSGYFQV
Sbjct: 950  YTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAATILDKNNLVKYDRKSGYFQV 1009

Query: 751  TDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLL 572
            TDLGRI+SYYYI+HGT+STYNEHLKPTMGDIEL RLFSLSEEFKYVTVR++EKMELAKLL
Sbjct: 1010 TDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQDEKMELAKLL 1069

Query: 571  DRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLK 392
            DRVPIP+KESLEEPSAKINVLLQA ISQLKLEGLSL SDMV+ITQ+AGRLLRALFEIVLK
Sbjct: 1070 DRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLK 1129

Query: 391  RGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEI 212
            RGWAQLAE+AL LCKMV+KRMW+VQTPLRQF GIPNE+L+K+EKKD++W+RYYDLS+QEI
Sbjct: 1130 RGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEILMKLEKKDLAWDRYYDLSSQEI 1189

Query: 211  IELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPF 32
             ELIR +KMG  ++R IHQFPKL+L+AH+QPITRTVL++ELTITPDF WE++VHGYVEPF
Sbjct: 1190 GELIRFQKMGRTLHRFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPF 1249

Query: 31   WILVEDNDGE 2
            W++VEDNDGE
Sbjct: 1250 WVIVEDNDGE 1259



 Score =  288 bits (737), Expect = 1e-74
 Identities = 210/717 (29%), Positives = 349/717 (48%), Gaps = 8/717 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N VQ++V+     T +N+L+ APTG+GKT  A   IL+     +GPD     S  ++
Sbjct: 1353 KHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----SIMRV 1405

Query: 2080 VYVAPMKALVAEVVGNLSKRLA-DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VY+AP++A+  E   +  K+      + V ELTG+ S+  + +E+ QI+++TPEKWD ++
Sbjct: 1406 VYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEKWDALS 1465

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R Y Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1466 RRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLAN 1525

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1544
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  V+  A 
Sbjct: 1526 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAVVQHAK 1584

Query: 1543 KHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1367
              +  +VFV +RK    TA  +   +  ++    F      S E L    +K+    L+ 
Sbjct: 1585 NGKPAIVFVPTRKHVRLTAVDLMSYSKVDNEEPAFRL---RSAEELKPFVDKISEETLRT 1641

Query: 1366 MLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNP 1187
             L +G    H G++ +D  +V  LF    IQV V +++L W V L AH +++  T  Y+ 
Sbjct: 1642 TLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDG 1701

Query: 1186 EKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 1007
             + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1702 RENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1761

Query: 1006 LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 827
            L DN NAEIV   ++N ++A  +L +T++Y R+ +NP  Y L          L +  ++L
Sbjct: 1762 LHDNFNAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEL 1818

Query: 826  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 647
            + +  T L+ +  +  +         +LG I+SYYYIS+ T+  ++  L        L  
Sbjct: 1819 VENTLTDLEASKCITIEDDMD-LSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLE 1877

Query: 646  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 470
            + + + E+  + +R  E+  L +L++      +     +P  K N LLQA  ++  + G 
Sbjct: 1878 ILASASEYAQLPIRPGEEDVLRRLINHQRFSFENPRCTDPHVKANALLQAHFTRQHVGG- 1936

Query: 469  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGI 290
            +L  D   +   A RLL+A+ +++   GW  LA  A+++ +MV++ MW   + L Q    
Sbjct: 1937 NLALDQREVLLYATRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHF 1996

Query: 289  PNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
              ++  +  E    + E  +DL   E  E   + +M       I +  ++FP +DLS
Sbjct: 1997 TKDLAKRCQENPGKNIETIFDLVEMEDDERRELLQMSDLQLLDIAKFCNRFPNIDLS 2053


>gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
            gi|561022525|gb|ESW21255.1| hypothetical protein
            PHAVU_005G055300g [Phaseolus vulgaris]
          Length = 2184

 Score = 1547 bits (4005), Expect = 0.0
 Identities = 786/1034 (76%), Positives = 891/1034 (86%), Gaps = 7/1034 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAH 2906
            +VQD E E++D G + + S AMQMGG IDDEDME+ +EGM+LNVQDIDAYWLQRKI+LA 
Sbjct: 237  IVQDEEEEEED-GVEQNGSGAMQMGGGIDDEDMEDGNEGMSLNVQDIDAYWLQRKISLAF 295

Query: 2905 SSAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTR 2726
               IDPQ+ Q+LAEEVL+ILA +GD R+VE+ L+  L+F+KF LIK LLRNR KIVWCTR
Sbjct: 296  EQQIDPQQCQKLAEEVLKILA-EGDDREVESKLLFHLEFDKFSLIKFLLRNRLKIVWCTR 354

Query: 2725 LARSEDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXX 2546
            LAR++DQEER+RIE EM G   L+ ILEQLHATRA+AKERQKNLE+S+REEAR+L     
Sbjct: 355  LARAQDQEERERIEEEMKGTE-LQPILEQLHATRASAKERQKNLEKSIREEARRLKDDTG 413

Query: 2545 XXXXXXXXXXXXGM-----ENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRST 2381
                        G      E+ WLKGQRQ+LDLE+I+F QGG  MA KKC+LP GS+R  
Sbjct: 414  GDGDKERERGRRGPADRDGESGWLKGQRQMLDLENIAFAQGGFFMAKKKCDLPDGSYRHL 473

Query: 2380 RKGYEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAEN 2201
             KGYEE+H        L   E L+KI+ MP+W QPAF GM  LNRVQS+VY+TALF  +N
Sbjct: 474  SKGYEEIHVPALKAKALDPNEKLVKISSMPDWAQPAFKGMSQLNRVQSKVYDTALFKPDN 533

Query: 2200 LLLCAPTGAGKTNVAVLTILQQIGLNRGP-DGELDLSSFKIVYVAPMKALVAEVVGNLSK 2024
            LLLCAPTGAGKTNVAVLTILQQI  +R P DG +D S++KIVYVAPMKALVAEVVGNLS 
Sbjct: 534  LLLCAPTGAGKTNVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSN 593

Query: 2023 RLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXX 1844
            RL +Y++ V+EL+GDQSL+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK       
Sbjct: 594  RLQEYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEI 653

Query: 1843 XXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFD 1664
                DNRGPVLESIV+RTVRQIETT++ IRLVGLSATLPNYEDVALFLRVD  KGLFYFD
Sbjct: 654  HLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFD 713

Query: 1663 NSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARH 1484
            NSYRP PLSQQY+G+TV+KPLQRFQLMNDICYEKV++ AGKHQVL+FVHSRKETAKTAR 
Sbjct: 714  NSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARA 773

Query: 1483 IRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLV 1304
            IRDAAL  DT+GRF+K D ASREIL + ++ VK+ DLKD+LPYGFAIHHAGM+R D  LV
Sbjct: 774  IRDAALGKDTLGRFLKEDSASREILQTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLV 833

Query: 1303 EDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAG 1124
            EDLF D H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAG
Sbjct: 834  EDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAG 893

Query: 1123 RPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREAC 944
            RPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLAD LNAEIVLGTVQNAREAC
Sbjct: 894  RPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREAC 953

Query: 943  TWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSG 764
             W+GYTYLY+RMLRNP LYG++ D L +D TLEERRADLIH+AA+ILDRNNLVKYDRKSG
Sbjct: 954  NWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAASILDRNNLVKYDRKSG 1013

Query: 763  YFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMEL 584
            YFQVTDLGRI+SYYYI+HGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMEL
Sbjct: 1014 YFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMEL 1073

Query: 583  AKLLDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFE 404
            AKLLDRVPIP+KESLEEPSAKINVLLQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFE
Sbjct: 1074 AKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFE 1133

Query: 403  IVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLS 224
            IVLKRGWAQLAE+AL LCKMV+KRMWSVQTPLRQF GI +++L K+EKKD++WERYYDLS
Sbjct: 1134 IVLKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGISSDLLTKLEKKDLAWERYYDLS 1193

Query: 223  AQEIIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGY 44
            +QEI ELIR  KMG  ++R IHQFPKL+L+AH+QPITRTVL++ELTITPDF W++++HGY
Sbjct: 1194 SQEIGELIRAPKMGRTLHRFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGY 1253

Query: 43   VEPFWILVEDNDGE 2
            VEPFW++VEDNDGE
Sbjct: 1254 VEPFWVIVEDNDGE 1267



 Score =  288 bits (736), Expect = 1e-74
 Identities = 210/720 (29%), Positives = 350/720 (48%), Gaps = 8/720 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     + PD     S  ++
Sbjct: 1361 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKVPD-----SVMRV 1413

Query: 2080 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VYVAP+++L  E   +  K+      + V ELTG+ +   + +E+ QII++TPEKWD ++
Sbjct: 1414 VYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALS 1473

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R   QLV               GP+LE +VSR        +  IR+V LS +L N
Sbjct: 1474 RRWKQRKQVQLVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQVENKIRIVALSTSLAN 1533

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1547
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1534 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAK 1592

Query: 1546 GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1367
             +   L+FV +RK    TA  +   + A+     F+       E L    EK+++  LK 
Sbjct: 1593 NRKPALIFVPTRKHVRLTAVDLITYSGADSGEKPFLL---RPPEELEPFLEKIRDEMLKV 1649

Query: 1366 MLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNP 1187
             L  G    H G++ +D  +V  LF    IQV V  +++ W V L AH +++  T  Y+ 
Sbjct: 1650 TLREGVGYLHEGLNSLDHDIVTQLFDAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDG 1709

Query: 1186 EKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 1007
             + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1710 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1769

Query: 1006 LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 827
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1770 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1826

Query: 826  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 647
            + +  + L+ +  +  +         +LG I+SYYYIS+ T+  ++  +        L  
Sbjct: 1827 VENTLSDLEASKCITIEEDMD-LSPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLE 1885

Query: 646  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 470
            + S + E+  + +R  E+  + KL++      +   + +P  K N LLQA  S+ +  G 
Sbjct: 1886 ILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSR-QFVGG 1944

Query: 469  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGI 290
            +L  D   +  +A RLL+A+ +++   GW  LA   +++ +MV++ MW   + L Q    
Sbjct: 1945 NLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSMLLQLPHF 2004

Query: 289  PNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLSAHI 125
              ++  K  E    S E  +DL   E  E   +  M       I R  ++FP +DLS  +
Sbjct: 2005 TKDLAKKCQENPGKSIETVFDLLEMEDDERHELLGMSDSQLLDIARFCNRFPNIDLSYEV 2064


>ref|XP_003571468.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
            [Brachypodium distachyon]
          Length = 2179

 Score = 1546 bits (4002), Expect = 0.0
 Identities = 777/1030 (75%), Positives = 895/1030 (86%), Gaps = 4/1030 (0%)
 Frame = -3

Query: 3079 VQDVESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAHS 2903
            VQD   E+DD   + ++   MQMGG +DD+D++N++EG+ +NVQDIDAYWLQRKIT A+ 
Sbjct: 243  VQDELDEEDDDVAELNRPGGMQMGGELDDDDLQNSNEGLTINVQDIDAYWLQRKITQAYE 302

Query: 2902 SAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRL 2723
              IDPQ+SQ+LAEE+L+I+A +GD RDVEN LV  LD+EKFDLIKL+LRNR KIVWCTRL
Sbjct: 303  D-IDPQQSQKLAEEILKIIA-EGDDRDVENRLVMELDYEKFDLIKLVLRNRFKIVWCTRL 360

Query: 2722 ARSEDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXX 2543
            AR+EDQEERK+IE EM  +  L  ILEQLHATRA+AKERQKNLE+S+R+EA++L      
Sbjct: 361  ARAEDQEERKKIEEEMMDNPTLAPILEQLHATRASAKERQKNLEKSIRDEAKRLLNNDNT 420

Query: 2542 XXXXXXXXXXXG---MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKG 2372
                           ME+ WLKGQRQLLDL+S+SFHQGGLLMANKKCELP GSFR+  KG
Sbjct: 421  AGTDGPRDRRAVDRDMESGWLKGQRQLLDLDSLSFHQGGLLMANKKCELPEGSFRTPHKG 480

Query: 2371 YEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLL 2192
            YEEVH       P   GE ++KI+DMP W QPAF GM+ LNRVQSRVY+TALF  +N+LL
Sbjct: 481  YEEVHVPALKARPYGAGEKIVKISDMPGWAQPAFAGMQQLNRVQSRVYDTALFKPDNILL 540

Query: 2191 CAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLAD 2012
            CAPTGAGKTNVAVLTIL QIGL+   DGE D + +KIVYVAPMKALVAEVVGNLS RL D
Sbjct: 541  CAPTGAGKTNVAVLTILHQIGLHM-KDGEFDNTKYKIVYVAPMKALVAEVVGNLSARLKD 599

Query: 2011 YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXX 1832
            +N+TV+EL+GDQ+L++QQI+ETQIIVTTPEKWDI+TRKSGDRTYTQ+VK           
Sbjct: 600  FNVTVRELSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLH 659

Query: 1831 DNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYR 1652
            DNRGPVLESIVSRTVRQIETT+E IRLVGLSATLPNYEDVA+FLRV +S+GLF+FDNSYR
Sbjct: 660  DNRGPVLESIVSRTVRQIETTKEHIRLVGLSATLPNYEDVAVFLRV-RSEGLFHFDNSYR 718

Query: 1651 PCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDA 1472
            PCPL+QQYIG+TVRKPLQRFQLMN+ICYEKV++ AGKHQVL+FVHSRKETAKTAR IRD 
Sbjct: 719  PCPLAQQYIGITVRKPLQRFQLMNEICYEKVMAAAGKHQVLIFVHSRKETAKTARAIRDT 778

Query: 1471 ALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLF 1292
            ALANDT+ RF+K + AS+EIL S++E VK++DLKD+LPYGFAIHHAGM+RVD   VE+LF
Sbjct: 779  ALANDTLTRFLKDESASQEILSSQAELVKSSDLKDLLPYGFAIHHAGMARVDREFVEELF 838

Query: 1291 GDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQY 1112
             D+HIQVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQY
Sbjct: 839  ADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQY 898

Query: 1111 DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLG 932
            D++GEGII+TGHSELQYYLSLMNQQLPIESQFVSKLAD LNAEIVLGT+QNAREAC+WLG
Sbjct: 899  DTHGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTIQNAREACSWLG 958

Query: 931  YTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQV 752
            YTYLYIRMLRNP LYGL AD +E D TL+ERRADL+HSAA +LD+NNL+KYDRK+GYFQV
Sbjct: 959  YTYLYIRMLRNPTLYGLPADIMETDKTLDERRADLVHSAANLLDKNNLIKYDRKTGYFQV 1018

Query: 751  TDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLL 572
            TDLGRI+SYYYISHGT+STYNE+LKPTMGDIELCRLFSLSEEFKYV+VR++EKMELAKLL
Sbjct: 1019 TDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKMELAKLL 1078

Query: 571  DRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLK 392
            DRVPIPVKESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLK
Sbjct: 1079 DRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLGSDMVYIRQSAGRLLRALFEIVLK 1138

Query: 391  RGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEI 212
            RGWAQLAE+AL LCKM+ K+MWSVQTPLRQF GIP E+L+K+EKK++ WERYYDLS+ EI
Sbjct: 1139 RGWAQLAEKALNLCKMIDKQMWSVQTPLRQFPGIPKEILMKLEKKELVWERYYDLSSAEI 1198

Query: 211  IELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPF 32
             +LIR  KMG Q++RCIHQ PKL+LSAH+QPITRTVL  ELTITPDF W+++VHGYVE F
Sbjct: 1199 GQLIRFDKMGKQLHRCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVHGYVEAF 1258

Query: 31   WILVEDNDGE 2
            W++VEDNDGE
Sbjct: 1259 WVIVEDNDGE 1268



 Score =  286 bits (732), Expect = 4e-74
 Identities = 206/724 (28%), Positives = 363/724 (50%), Gaps = 7/724 (0%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            +   K+ N +Q++V+     + + +L+ APTG+GKT  A   IL+     +   GE ++ 
Sbjct: 1358 YSAFKHFNPIQTQVFTVLYNSDDTVLVAAPTGSGKTICAEFAILRNH--QKALSGETNM- 1414

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1913
              ++VY+AP++AL  E   + SK+  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1415 --RVVYIAPIEALAKERYRDWSKKFGEF-ARVVELTGETAADLKLLDKGEIIISTPEKWD 1471

Query: 1912 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1733
             ++R+   R + Q V              +G VLE IVSR  R        IR+V LSA+
Sbjct: 1472 ALSRRWKQRKHIQQVSLFIVDELHLIGSEKGHVLEIIVSRMRRISSHIGSNIRIVALSAS 1531

Query: 1732 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1553
            L N +D+  ++    + GLF F  + RP PL     GV +     R Q M    Y  V  
Sbjct: 1532 LGNAKDLGEWIGAT-AHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMAKPTYTAVTQ 1590

Query: 1552 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1376
             A   +  LVFV +RK    TA  +   + A      F+ G   S++ + + +  V    
Sbjct: 1591 HAKNGKPALVFVPTRKHARLTALDLCAYSSAEGAGTPFLLG---SKDEMDTFTGGVNEET 1647

Query: 1375 LKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*I 1196
            LK+ L  G    H G+S +D  LV  LF    IQV V+++ + W  +LPAH +++  T  
Sbjct: 1648 LKNTLKCGVGYLHEGLSELDQELVTQLFLGGRIQVCVASSTMCWGRSLPAHLVVVMGTQY 1707

Query: 1195 YNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 1016
            Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1708 YDGRESAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHL 1767

Query: 1015 VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 836
               L D++NAE+V+G V+N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1768 HHFLHDHMNAEVVVGVVENKQDAVDYLTWTFMYRRLNKNPNYYNLQG---VSHRHLSDHL 1824

Query: 835  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 656
            ++LI +  T L+ +  V  + +  Y +  +LG I++YYYIS+ T+  ++  L        
Sbjct: 1825 SELIETVLTDLESSKCVAVE-EDMYLKPLNLGLIAAYYYISYTTIERFSSMLTQKTKMKG 1883

Query: 655  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 479
            L  + + + E+  +  R  E+  + +L+      + K    +P  K N LLQ+  ++  +
Sbjct: 1884 LLEILASASEYAELPSRPGEEEYIERLVRHQRFSIEKPKYGDPHVKANALLQSHFARHTV 1943

Query: 478  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQF 299
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW   + L Q 
Sbjct: 1944 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLSLALNAMELSQMVTQGMWDRDSVLLQI 2002

Query: 298  KGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
                 E+  +  E +    E  ++L+   I E+  + ++       +     +FP +D++
Sbjct: 2003 PHFTRELARRCQENEGKPIESIFELAEMGIDEMRDLLQLSNSELHDVVEFFKRFPNIDMA 2062

Query: 133  AHIQ 122
              ++
Sbjct: 2063 YEVR 2066


>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Solanum tuberosum]
          Length = 2174

 Score = 1541 bits (3990), Expect = 0.0
 Identities = 780/1031 (75%), Positives = 891/1031 (86%), Gaps = 4/1031 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMG-GIDDEDMENADEGMNLNVQDIDAYWLQRKITLAH 2906
            +V D E EDDD+  +A  S AMQMG GIDD++M +ADEGM LNVQDIDAYWLQRKI+ A+
Sbjct: 232  VVPDDEEEDDDVM-EASASGAMQMGSGIDDDEMRDADEGMALNVQDIDAYWLQRKISQAY 290

Query: 2905 SSAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTR 2726
               IDPQ+SQ+LAEEVL+ILA +GD R+VE  L+  L F+KF LIK LLRNR K+VWCTR
Sbjct: 291  EQQIDPQQSQKLAEEVLKILA-EGDDREVETKLLVHLQFDKFSLIKYLLRNRLKVVWCTR 349

Query: 2725 LARSEDQEERKRIEYEMSGDGVLR-AILEQLHATRATAKERQKNLERSLREEARKLXXXX 2549
            LAR+EDQE RK+IE EM G G    AILEQLHATRATAKERQKNLE+S+REEAR+L    
Sbjct: 350  LARAEDQENRKKIEEEMLGLGPDHVAILEQLHATRATAKERQKNLEKSIREEARRLKDES 409

Query: 2548 XXXXXXXXXXXXXG-MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKG 2372
                           ++N WL GQRQ LDL+S++F QGGLLMANKKCELP GS+R+ +KG
Sbjct: 410  GVDGDGERKALVDRDLDNGWLMGQRQFLDLDSLAFQQGGLLMANKKCELPVGSYRNHKKG 469

Query: 2371 YEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLL 2192
            YEEVH       PL  GE+L+KI+ +PEW +PAF GM  LNRVQS+VYETALF+ EN+LL
Sbjct: 470  YEEVHVPALKPRPLDPGEELVKISSIPEWARPAFSGMTQLNRVQSKVYETALFSPENILL 529

Query: 2191 CAPTGAGKTNVAVLTILQQIGLNRGPD-GELDLSSFKIVYVAPMKALVAEVVGNLSKRLA 2015
            CAPTGAGKTNVA+LTILQQI LNR  D G  + +++KIVYVAPMKALVAEVVGNLSKRL 
Sbjct: 530  CAPTGAGKTNVAMLTILQQIALNRNEDDGTFNHNNYKIVYVAPMKALVAEVVGNLSKRLE 589

Query: 2014 DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXX 1835
             Y +TVKEL+GDQ+L+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK          
Sbjct: 590  HYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLL 649

Query: 1834 XDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSY 1655
             DNRGPVLESI++RT+RQIETT+E IRLVGLSATLPNYEDVA+FLRVD  KGLF+FDNSY
Sbjct: 650  HDNRGPVLESIIARTIRQIETTKEHIRLVGLSATLPNYEDVAVFLRVDLKKGLFHFDNSY 709

Query: 1654 RPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRD 1475
            RP PL+QQYIG+TV+KPLQRFQLMND+CYEKV+S AGKHQVL+FVHSRKET+KTAR IRD
Sbjct: 710  RPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISIAGKHQVLIFVHSRKETSKTARAIRD 769

Query: 1474 AALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDL 1295
             ALANDT+G+F+K D  +RE+L S++E VK+ DLKD+LPYGFAIHHAGM R D  LVEDL
Sbjct: 770  TALANDTLGKFLKEDSLTRELLQSQTELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDL 829

Query: 1294 FGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQ 1115
            F D H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQ
Sbjct: 830  FADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQ 889

Query: 1114 YDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWL 935
            YD+YGEGII+TGHSELQYYLSLMNQQLPIESQF+SKLAD LNAEIVLGTV NA+EAC WL
Sbjct: 890  YDTYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVLNAKEACKWL 949

Query: 934  GYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQ 755
             YTYLY+RM+RNP LYGL ADAL+ D  LEERRADL+HSAA +LD+NNLVKYDRKSGYFQ
Sbjct: 950  LYTYLYVRMVRNPTLYGLPADALKTDYALEERRADLVHSAAILLDKNNLVKYDRKSGYFQ 1009

Query: 754  VTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKL 575
            VTDLGRI+SYYYI+HGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKL
Sbjct: 1010 VTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKL 1069

Query: 574  LDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVL 395
            LDRVPIP+KESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+ITQ+A RL+RALFEIVL
Sbjct: 1070 LDRVPIPIKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYITQSAARLMRALFEIVL 1129

Query: 394  KRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQE 215
            KRGWAQLAE+ALK CKM+SKRMWSVQTPLRQF GIPNE+L+K+EKKD++WERYYDLS+QE
Sbjct: 1130 KRGWAQLAEKALKWCKMISKRMWSVQTPLRQFHGIPNEILMKLEKKDLAWERYYDLSSQE 1189

Query: 214  IIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEP 35
            + ELIR  KMG  +++ IHQFPKL+L+AH+QPITR+VL++ELTITPDF WE++VHGYVEP
Sbjct: 1190 LGELIRFPKMGRTLHKFIHQFPKLNLAAHVQPITRSVLRVELTITPDFQWEDKVHGYVEP 1249

Query: 34   FWILVEDNDGE 2
            FWI+VEDNDGE
Sbjct: 1250 FWIIVEDNDGE 1260



 Score =  301 bits (772), Expect = 1e-78
 Identities = 214/718 (29%), Positives = 359/718 (50%), Gaps = 9/718 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     +GPD     S+ + 
Sbjct: 1354 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----STIRA 1406

Query: 2080 VYVAPMKALVAEVVGNLSKRLADY-NITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VY+AP++AL  E   +   +  D+  + V ELTG+ +   + +E+ Q+I++TPEKWD ++
Sbjct: 1407 VYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQLIISTPEKWDALS 1466

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GP+LE IVSR        +  IR+V LS +L N
Sbjct: 1467 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQVENKIRIVALSTSLAN 1526

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1544
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1527 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAR 1585

Query: 1543 KHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKNTDLK 1370
            K +  LV+V +RK    TA  +   +++ ++    F+     S E L    E++    L+
Sbjct: 1586 KGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLL---RSAEELEPFVERINEPMLQ 1642

Query: 1369 DMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYN 1190
            + L YG    H G+S  D  +V+ LF    IQV V    + W V L AH +++  T  Y+
Sbjct: 1643 ETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCWGVPLSAHLVVVMGTQYYD 1702

Query: 1189 PEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVS 1010
              + A T+    D++QM+  A RP  DS G+ +I+       YY   + +  P+ES    
Sbjct: 1703 GRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYEAFPVESHLQH 1762

Query: 1009 KLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRAD 830
             L DNLNAE+V+G +QN ++A  +L +T++Y R+ +NP  Y L          L ++ ++
Sbjct: 1763 YLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDQLSE 1819

Query: 829  LIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELC 650
            L+ +  + L+ +  V  + +       +LG I+SYYYIS+ T+  ++  +        L 
Sbjct: 1820 LVENTISDLEASKCVTIEDEF-LLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLL 1878

Query: 649  RLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEG 473
             + + + EF+ + +R  E+  + +L++ +    +     +P  K N LLQA  S+ ++ G
Sbjct: 1879 EILASASEFEQLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFSR-QMVG 1937

Query: 472  LSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKG 293
             +L SD   +  +A RLL+A+ +++   GW  LA   +++ +MV++ MW   + L Q   
Sbjct: 1938 GNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSMLLQLPH 1997

Query: 292  IPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
               E+  K  E    S E  +DL   E  E   + +M       I R  ++FP +DL+
Sbjct: 1998 FTKELAKKCQENPGRSIETVFDLVEMEDDERRELLQMSDLQLLDIARFCNRFPNIDLT 2055


>ref|XP_002463258.1| hypothetical protein SORBIDRAFT_02g040700 [Sorghum bicolor]
            gi|241926635|gb|EER99779.1| hypothetical protein
            SORBIDRAFT_02g040700 [Sorghum bicolor]
          Length = 2182

 Score = 1541 bits (3989), Expect = 0.0
 Identities = 775/1027 (75%), Positives = 890/1027 (86%), Gaps = 3/1027 (0%)
 Frame = -3

Query: 3073 DVESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSA 2897
            D++ +D+D   + +    MQMGG +DD+DM+NA++G+ +NVQDIDAYWLQRKI+ A+   
Sbjct: 247  DLDEDDEDDMAELNGPGGMQMGGELDDDDMQNANQGLAVNVQDIDAYWLQRKISQAYGDG 306

Query: 2896 -IDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLA 2720
             ID Q+SQ+LAE++L+I+A +GD RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLA
Sbjct: 307  DIDAQQSQKLAEDILKIIA-EGDDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLA 365

Query: 2719 RSEDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXX 2540
            R+EDQE+RK+IE EM+ D  L  ILEQLHATRA+AKERQKNLE+S+R+EA++L       
Sbjct: 366  RAEDQEQRKKIEEEMASDPSLAPILEQLHATRASAKERQKNLEKSIRDEAKRLLNNDAGA 425

Query: 2539 XXXXXXXXXXG-MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEE 2363
                        ME+ WLKGQRQLLDLES+SFHQGGL MANKKCELP GSFR+  KGYEE
Sbjct: 426  DGARDRRAAERDMESGWLKGQRQLLDLESLSFHQGGLFMANKKCELPTGSFRTPHKGYEE 485

Query: 2362 VHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAP 2183
            VH       P    E ++KI+DMPE+ + AF GM  LNRVQSRVY+TALF  +N+LLCAP
Sbjct: 486  VHVPALKAKPYETSEKIVKISDMPEFARSAFDGMTQLNRVQSRVYDTALFKPDNILLCAP 545

Query: 2182 TGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNI 2003
            TGAGKTNVAVLTILQQIGL+   DG+ D + +KIVYVAPMKALVAEVVGNLS RLA YN+
Sbjct: 546  TGAGKTNVAVLTILQQIGLHMQDDGQFDNTKYKIVYVAPMKALVAEVVGNLSNRLAGYNV 605

Query: 2002 TVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNR 1823
            TV+EL+GDQ+L++QQI+ETQIIVTTPEKWDI+TRKSGDRTYTQ+VK           DNR
Sbjct: 606  TVRELSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNR 665

Query: 1822 GPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCP 1643
            GPVLESIV+RTVRQIETT+E IRLVGLSATLPNYEDVALFLRV K + LFYFDNSYRPCP
Sbjct: 666  GPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVRK-ESLFYFDNSYRPCP 724

Query: 1642 LSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALA 1463
            L+QQYIG+TVRKPLQR QLMN+ICYEKV++ AGKHQVL+FVHSRKETAKTA+ IRD ALA
Sbjct: 725  LAQQYIGITVRKPLQRMQLMNEICYEKVMAAAGKHQVLIFVHSRKETAKTAKAIRDTALA 784

Query: 1462 NDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDR 1283
            NDT+ RF+K + AS+EIL + +E VKN DLKD+LPYGFAIHHAGM+RVD  LVE+LF D+
Sbjct: 785  NDTVSRFLKNESASQEILGTHAELVKNNDLKDLLPYGFAIHHAGMARVDRELVEELFADK 844

Query: 1282 HIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSY 1103
            HIQVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQYD++
Sbjct: 845  HIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTH 904

Query: 1102 GEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTY 923
            GEGII+TGHSELQ+YLSLMNQQLPIESQF+SKLAD LNAEIVLGT+QNAREAC+WLGYTY
Sbjct: 905  GEGIILTGHSELQFYLSLMNQQLPIESQFISKLADQLNAEIVLGTIQNAREACSWLGYTY 964

Query: 922  LYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDL 743
            LYIRMLRNP LYGL AD LE D TL+ERRADLIHSAA +LDRNNL+KYDRK+GYFQVTDL
Sbjct: 965  LYIRMLRNPTLYGLPADILESDKTLDERRADLIHSAANLLDRNNLIKYDRKTGYFQVTDL 1024

Query: 742  GRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRV 563
            GRI+SYYYISHGT+STYNE+LKPTMGDIELCRLFSLSEEFKYV VR +EKMELAKLLDRV
Sbjct: 1025 GRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVGVRLDEKMELAKLLDRV 1084

Query: 562  PIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGW 383
            PIPVKESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+I Q+AGRLLRALFEIVLKRGW
Sbjct: 1085 PIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGW 1144

Query: 382  AQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIEL 203
            AQLAE+AL LCKMV K+MWSVQTPLRQF GIP E+L+K+EKK+++WERYYDLS+QEI EL
Sbjct: 1145 AQLAEKALNLCKMVDKQMWSVQTPLRQFTGIPKEILMKLEKKELAWERYYDLSSQEIGEL 1204

Query: 202  IRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWIL 23
            IR  KMG Q+++CIHQ PKL+LSAH+QPITRTVL  ELTITPDF W+++VHGYVEPFW++
Sbjct: 1205 IRYPKMGRQLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVHGYVEPFWVI 1264

Query: 22   VEDNDGE 2
            VEDNDGE
Sbjct: 1265 VEDNDGE 1271



 Score =  285 bits (729), Expect = 1e-73
 Identities = 204/724 (28%), Positives = 360/724 (49%), Gaps = 7/724 (0%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            +   K+ N +Q++V+     + +++L+ APTG+GKT  A   IL+     R   GE   S
Sbjct: 1361 YSAFKHFNPIQTQVFTVLYNSDDSVLVAAPTGSGKTICAEFAILRNH--QRAVSGE---S 1415

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1913
            + ++VY+AP++ L  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1416 NMRVVYIAPIEGLAKERYRDWERKFGEF-AKVVELTGETAADLKLLDKGEIIISTPEKWD 1474

Query: 1912 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1733
             ++R+   R + Q V             ++G VLE IVSR  R        IR+V LSA+
Sbjct: 1475 ALSRRWKQRKHIQQVSLFIVDELHLLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSAS 1534

Query: 1732 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1553
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1535 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1593

Query: 1552 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1376
             A   +  LV+V +RK    TA  +   +        F+ G   S + + + +  V+   
Sbjct: 1594 HAKNSKPALVYVPTRKHARLTALDLCAYSSVEGAGTPFLLG---SEDEMDTFTRGVEEET 1650

Query: 1375 LKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*I 1196
            LK+ L  G    H G+S +D  LV  LF    IQV V+++ + W   LPAH +++  T  
Sbjct: 1651 LKNTLKCGVGYLHEGLSELDQELVTQLFLGGRIQVCVASSTMCWGRPLPAHLVVVMGTQY 1710

Query: 1195 YNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 1016
            Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1711 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESNL 1770

Query: 1015 VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 836
               L D++NAE+V+G V+N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1771 HHFLHDHMNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNFYNLQG---VSHRHLSDHL 1827

Query: 835  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 656
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1828 SELVETVLNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKVKG 1886

Query: 655  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 479
            L  + + + E+  +  R  E+  + +L+      + K    +P  K N LLQA  S+  +
Sbjct: 1887 LLEILASASEYAELPGRPGEEEFIERLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTV 1946

Query: 478  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQF 299
             G +L +D   I  +A RLL+A+ +++   GW  LA  A++L +MV++ MW   + L Q 
Sbjct: 1947 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLSLALSAMELSQMVTQGMWDRDSVLLQV 2005

Query: 298  KGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
                 ++  +  E +    E  +DL+   + E+  + ++       I     +FP +D++
Sbjct: 2006 PHFTKDLARRCQENEGKPIESIFDLAEMGVDEMRDLLQLSNSQLQDIIEFFKRFPNVDMT 2065

Query: 133  AHIQ 122
              ++
Sbjct: 2066 YEVR 2069


>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Solanum lycopersicum]
          Length = 2174

 Score = 1540 bits (3988), Expect = 0.0
 Identities = 780/1031 (75%), Positives = 889/1031 (86%), Gaps = 4/1031 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMG-GIDDEDMENADEGMNLNVQDIDAYWLQRKITLAH 2906
            +V D E EDDD+  +A  S AMQMG GIDD++M  ADEGM LNVQDIDAYWLQRKI+ A+
Sbjct: 232  VVPDDEEEDDDVM-EASASGAMQMGSGIDDDEMREADEGMTLNVQDIDAYWLQRKISQAY 290

Query: 2905 SSAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTR 2726
               IDPQ+SQ+LAEEVL+ILA +GD R+VE  L+  L F+KF LIK LLRNR K+VWCTR
Sbjct: 291  EQQIDPQQSQKLAEEVLKILA-EGDDREVETKLLVHLQFDKFSLIKYLLRNRLKVVWCTR 349

Query: 2725 LARSEDQEERKRIEYEMSGDGVLR-AILEQLHATRATAKERQKNLERSLREEARKLXXXX 2549
            LAR+EDQE RK+IE EM G G    AILEQLHATRATAKERQKNLE+S+REEAR+L    
Sbjct: 350  LARAEDQENRKKIEEEMLGLGQDHVAILEQLHATRATAKERQKNLEKSIREEARRLKDES 409

Query: 2548 XXXXXXXXXXXXXG-MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKG 2372
                           ++N WL GQRQ LDL+S++F QGGLLMANKKCELP GS+R+ +KG
Sbjct: 410  GVDGDGERKALVDRDLDNGWLMGQRQFLDLDSLAFQQGGLLMANKKCELPVGSYRNHKKG 469

Query: 2371 YEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLL 2192
            YEEVH       PL  GE+L+KI+ +PEW QPAF GM  LNRVQS+VYETALF+ EN+LL
Sbjct: 470  YEEVHVPALKPRPLDPGEELVKISSIPEWAQPAFSGMTQLNRVQSKVYETALFSPENILL 529

Query: 2191 CAPTGAGKTNVAVLTILQQIGLNRGPD-GELDLSSFKIVYVAPMKALVAEVVGNLSKRLA 2015
            CAPTGAGKTNVA+LTILQQI LNR  D G  + +++KIVYVAPMKALVAEVVGNLSKRL 
Sbjct: 530  CAPTGAGKTNVAMLTILQQIALNRNEDDGTFNHNNYKIVYVAPMKALVAEVVGNLSKRLE 589

Query: 2014 DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXX 1835
             Y +TVKEL+GDQ+L+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK          
Sbjct: 590  HYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLL 649

Query: 1834 XDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSY 1655
             DNRGPVLESI++RT+RQIETT+E IRLVGLSATLPNYEDVA+FLRVD  KGLF+FDNSY
Sbjct: 650  HDNRGPVLESIIARTIRQIETTKEHIRLVGLSATLPNYEDVAVFLRVDLKKGLFHFDNSY 709

Query: 1654 RPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRD 1475
            RP PL+QQYIG+TV+KPLQRFQLMND+CYEKV+S AGKHQVL+FVHSRKET+KTAR IRD
Sbjct: 710  RPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISIAGKHQVLIFVHSRKETSKTARAIRD 769

Query: 1474 AALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDL 1295
             ALANDT+G+F+K D  +RE+L S++E VK+ DLKD+LPYGFAIHHAGM R D  LVEDL
Sbjct: 770  TALANDTLGKFLKEDSLTRELLQSQTELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDL 829

Query: 1294 FGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQ 1115
            F D H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQ
Sbjct: 830  FADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQ 889

Query: 1114 YDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWL 935
            YD+YGEGII+TGHSELQYYLSLMNQQLPIESQF+SKLAD LNAEIVLGTV NA+EAC WL
Sbjct: 890  YDTYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVLNAKEACKWL 949

Query: 934  GYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQ 755
             YTYLY+RM+RNP LYGL ADAL+ D  LEERRADL+HSAA +LD+NNLVKYDRKSGYFQ
Sbjct: 950  LYTYLYVRMVRNPTLYGLPADALKTDYALEERRADLVHSAAVLLDKNNLVKYDRKSGYFQ 1009

Query: 754  VTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKL 575
            VTDLGRI+SYYYI+HGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKL
Sbjct: 1010 VTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKL 1069

Query: 574  LDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVL 395
            LDRVPIP+KESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+ITQ+A RL+RALFEIVL
Sbjct: 1070 LDRVPIPIKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYITQSAARLMRALFEIVL 1129

Query: 394  KRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQE 215
            KRGWAQLAE+ALK CKM+SKRMWSVQTPLRQF GIPNE+L+K+EKKD++WERYYDLS+QE
Sbjct: 1130 KRGWAQLAEKALKWCKMISKRMWSVQTPLRQFHGIPNEILMKLEKKDLAWERYYDLSSQE 1189

Query: 214  IIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEP 35
            + ELIR  KMG  +++ IHQFPKL+L+AH+QPITR+VL++ELTITPDF WE++VHGYVE 
Sbjct: 1190 LGELIRFPKMGRTLHKFIHQFPKLNLAAHVQPITRSVLRVELTITPDFQWEDKVHGYVES 1249

Query: 34   FWILVEDNDGE 2
            FWI+VEDNDGE
Sbjct: 1250 FWIIVEDNDGE 1260



 Score =  305 bits (781), Expect = 9e-80
 Identities = 215/721 (29%), Positives = 361/721 (50%), Gaps = 9/721 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     +GPD     S+ + 
Sbjct: 1354 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKGPD-----STIRA 1406

Query: 2080 VYVAPMKALVAEVVGNLSKRLADY-NITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VY+AP++AL  E   +   +  D+  + V ELTG+ +   + +E+ Q+I++TPEKWD ++
Sbjct: 1407 VYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQLIISTPEKWDALS 1466

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GP+LE IVSR        +  IR+V LS +L N
Sbjct: 1467 RRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQVENKIRIVALSTSLAN 1526

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAG 1544
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  ++  A 
Sbjct: 1527 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAR 1585

Query: 1543 KHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKNTDLK 1370
            K +  LV+V +RK    TA  +   +++ ++    F+     S E L    E++    L+
Sbjct: 1586 KGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLL---RSAEELEPFVERINEPMLQ 1642

Query: 1369 DMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYN 1190
            + L YG    H G+S  D  +V+ LF    IQV V    + W V L AH +++  T  Y+
Sbjct: 1643 ETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCWGVPLSAHLVVVMGTQYYD 1702

Query: 1189 PEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVS 1010
              + A T+    D++QM+  A RP  DS G+ +I+       YY   + +  P+ES    
Sbjct: 1703 GRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYEAFPVESHLQH 1762

Query: 1009 KLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRAD 830
             L DNLNAE+V+G +QN ++A  +L +T++Y R+ +NP  Y L          L ++ ++
Sbjct: 1763 YLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDQLSE 1819

Query: 829  LIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELC 650
            L+ +  + L+ +  V  + +       +LG I+SYYYIS+ T+  ++  +        L 
Sbjct: 1820 LVENTISDLEASKCVTVEDEF-LLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLL 1878

Query: 649  RLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEG 473
             + + + EF+ + +R  E+  + +L++ +    +     +P  K N LLQA  S+ ++ G
Sbjct: 1879 EILASASEFEQLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFSR-QMVG 1937

Query: 472  LSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKG 293
             +L SD   +  +A RLL+A+ +++   GW  LA   +++ +MV++ MW   + L Q   
Sbjct: 1938 GNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSMLLQLPH 1997

Query: 292  IPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLSAH 128
               E+  K  E    S E  +DL   E  E   + +M       I R  ++FP +DL+ H
Sbjct: 1998 FTKELAKKCQENPGRSIETVFDLVEMEDNERRELLQMSDLQLLDIARFCNRFPNIDLTYH 2057

Query: 127  I 125
            +
Sbjct: 2058 V 2058


>tpg|DAA63842.1| TPA: hypothetical protein ZEAMMB73_506422 [Zea mays]
          Length = 2203

 Score = 1530 bits (3960), Expect = 0.0
 Identities = 779/1047 (74%), Positives = 889/1047 (84%), Gaps = 25/1047 (2%)
 Frame = -3

Query: 3067 ESEDDDLGGDAHQSEAMQMGG-IDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSA-I 2894
            E E+DD+  + +    MQMGG +DD+DM+NA++G+ +NVQDIDAYWLQRKI+ A+    I
Sbjct: 250  EDEEDDMA-ELNGPGGMQMGGELDDDDMQNANQGLTVNVQDIDAYWLQRKISQAYGDGDI 308

Query: 2893 DPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARS 2714
            D Q+SQ+LAE++L+I+A +GD RDVEN LV LLD+EKFDLIKLLLRNR KIVWCTRLAR+
Sbjct: 309  DAQQSQKLAEDILKIIA-EGDDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVWCTRLARA 367

Query: 2713 EDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXX 2534
            EDQE+RK IE EM+ D  L  ILEQLHATRA+AKERQKNLE+S+R+EA++L         
Sbjct: 368  EDQEQRKNIEEEMASDPSLAPILEQLHATRASAKERQKNLEKSIRDEAKRLLNNDAAAAG 427

Query: 2533 XXXXXXXXG----MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYE 2366
                         ME+ WLKGQRQLLDLES+SFHQGGL MANKKCELP GSFR+  KGYE
Sbjct: 428  ADGARDHRAAEWDMESGWLKGQRQLLDLESLSFHQGGLFMANKKCELPTGSFRTPHKGYE 487

Query: 2365 EVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCA 2186
            EVH       P   GE ++KI+DMPEW + AF GM  LNRVQSRVY+TALF  +N+LLCA
Sbjct: 488  EVHVPALKAKPYETGEKIVKISDMPEWARSAFDGMTQLNRVQSRVYDTALFKPDNILLCA 547

Query: 2185 PTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYN 2006
            PTGAGKTNVAVLTILQQIGL+   DGE D + +KIVYVAPMKALVAEVVGNLSKRLA YN
Sbjct: 548  PTGAGKTNVAVLTILQQIGLHM-QDGEFDNTKYKIVYVAPMKALVAEVVGNLSKRLAGYN 606

Query: 2005 ITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDN 1826
            +TV+EL+GDQ+L++QQI+ETQIIVTTPEKWDI+TRKSGDRTYTQ+VK           DN
Sbjct: 607  VTVRELSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDN 666

Query: 1825 RGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPC 1646
            RGPVLESIV+RTVRQIETT+E IRLVGLSATLPNYEDVALFLRV K + LFYFDNSYRPC
Sbjct: 667  RGPVLESIVARTVRQIETTKENIRLVGLSATLPNYEDVALFLRVRK-ESLFYFDNSYRPC 725

Query: 1645 PLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAAL 1466
            PL+QQYIG+TVRKPLQR QLMN+ICYEKV++ AGKHQVL+FVHSRKETAKTA+ IRD AL
Sbjct: 726  PLAQQYIGITVRKPLQRMQLMNEICYEKVMAAAGKHQVLIFVHSRKETAKTAKAIRDTAL 785

Query: 1465 ANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGD 1286
            ANDT+ RF+K + AS+EIL + +E VKN DLKD+LPYGFAIHHAGM+RVD  LVE+LF D
Sbjct: 786  ANDTVSRFLKNESASQEILGTHAELVKNNDLKDLLPYGFAIHHAGMARVDRELVEELFAD 845

Query: 1285 RHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDS 1106
            +HIQVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RAGRPQYD+
Sbjct: 846  KHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDT 905

Query: 1105 YGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYT 926
            +GEGII+TGHSELQ+YLSLMNQQLPIESQF+SKLAD LNAEIVLGT+QNAREAC+WLGYT
Sbjct: 906  HGEGIILTGHSELQFYLSLMNQQLPIESQFISKLADQLNAEIVLGTIQNAREACSWLGYT 965

Query: 925  YLYIRMLRNPVLYGLSADALEKDNTLEERRADL-------------------IHSAATIL 803
            YLYIRMLRNP LYGL AD LE D TL+ERRADL                   IHSAA +L
Sbjct: 966  YLYIRMLRNPTLYGLPADILESDKTLDERRADLVSIKGGPGAAVEPTVCNRKIHSAANLL 1025

Query: 802  DRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEF 623
            DRNNL+KYDRK+GYFQVTDLGRI+SYYYISHGT+STYNE+LKPTMGDIELCRLFSLSEEF
Sbjct: 1026 DRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEF 1085

Query: 622  KYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFI 443
            KYV VR +EKMELAKLLDRVPIPVKESLEEPSAKINVLLQA IS+LKLEGLSL SDMV+I
Sbjct: 1086 KYVGVRLDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYI 1145

Query: 442  TQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIE 263
             Q+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV K+MWSVQTPLRQF GIP E+L+K+E
Sbjct: 1146 RQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVDKQMWSVQTPLRQFTGIPKEILMKLE 1205

Query: 262  KKDISWERYYDLSAQEIIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTI 83
            KK+++WERYYDLS+QEI ELIR  KMG  +++CIHQ PKL+LSAH+QPITRTVL  ELTI
Sbjct: 1206 KKELAWERYYDLSSQEIGELIRYPKMGRPLHKCIHQLPKLNLSAHVQPITRTVLGFELTI 1265

Query: 82   TPDFNWEEQVHGYVEPFWILVEDNDGE 2
            TPDF W+++VHGYVEPFW++VEDNDGE
Sbjct: 1266 TPDFQWDDKVHGYVEPFWVIVEDNDGE 1292



 Score =  286 bits (733), Expect = 3e-74
 Identities = 204/724 (28%), Positives = 360/724 (49%), Gaps = 7/724 (0%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            +   K+ N +Q++V+     + +++L+ APTG+GKT  A   IL+     +   GE   S
Sbjct: 1382 YSAFKHFNPIQTQVFTVLYNSDDSVLVAAPTGSGKTICAEFAILRNH--QKALSGE---S 1436

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWD 1913
            + ++VY+AP++AL  E   +  ++  ++   V ELTG+ +   + +++ +II++TPEKWD
Sbjct: 1437 NMRVVYIAPIEALAKERYRDWERKFGEF-AKVVELTGETAADLKLLDKGEIIISTPEKWD 1495

Query: 1912 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSAT 1733
             ++R+   R + Q V             ++G VLE IVSR  R        IR+V LSA+
Sbjct: 1496 ALSRRWKQRKHIQQVSLFIVDELHLLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSAS 1555

Query: 1732 LPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLS 1553
            L N +D+  ++    S GLF F  + RP PL     GV +     R Q M    Y  +  
Sbjct: 1556 LANAKDLGEWIGAT-SHGLFNFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQ 1614

Query: 1552 CAGKHQ-VLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTD 1376
             A  ++  LV+V +RK    TA  +   +        F+ G G   +     +  V+   
Sbjct: 1615 HAKNNKPALVYVPTRKHARLTALDLCAYSSVEGAGTPFLLGSGDEMDTF---TRGVEEET 1671

Query: 1375 LKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*I 1196
            LK+ L  G    H G+S +D  LV  LF    IQV V+++ + W   LPAH +++  T  
Sbjct: 1672 LKNTLKCGVGYLHEGLSELDQELVTQLFLGGRIQVCVASSTMCWGRPLPAHLVVVMGTQY 1731

Query: 1195 YNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQF 1016
            Y+  + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES  
Sbjct: 1732 YDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESNL 1791

Query: 1015 VSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERR 836
               L D++NAE+V+G V+N ++A  +L +T++Y R+ +NP  Y L          L +  
Sbjct: 1792 HHFLHDHMNAEVVVGVVENKQDAVDYLTWTFMYRRLAKNPNFYNLQG---VSHRHLSDHL 1848

Query: 835  ADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIE 656
            ++L+ +    L+ +  V  + +  Y +  +LG I+SYYYIS+ T+  ++  L        
Sbjct: 1849 SELVETILNDLESSKCVAIE-EDMYLKPLNLGLIASYYYISYTTIERFSSMLTQKTKVKG 1907

Query: 655  LCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQARISQLKL 479
            L  + + + E+  +  R  E+  + +L+      + K    +P  K N LLQA  S+  +
Sbjct: 1908 LLEILASASEYAELPGRPGEEEFIERLVRHQRFSIEKPKYGDPHVKANALLQAHFSRHTV 1967

Query: 478  EGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQF 299
             G +L +D   I  +A RLL+A+ +++   GW  LA   ++L +MV++ MW   + L Q 
Sbjct: 1968 VG-NLAADQREILLSAHRLLQAMVDVISSNGWLSLALSTMELSQMVTQGMWDRDSVLLQV 2026

Query: 298  KGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLS 134
                 ++  +  E +    E  +DL+   + E+  + ++       I   I +FP +D++
Sbjct: 2027 PHFTKDLARRCQENEGKPIESIFDLAEMAVDEMRDLLQLSNSQLQDIIEFIKRFPNVDMT 2086

Query: 133  AHIQ 122
              ++
Sbjct: 2087 YEVR 2090


>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            isoform X1 [Citrus sinensis]
            gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 200 kDa helicase-like isoform
            X2 [Citrus sinensis]
          Length = 2179

 Score = 1528 bits (3956), Expect = 0.0
 Identities = 781/1031 (75%), Positives = 885/1031 (85%), Gaps = 4/1031 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMGG-IDDEDME-NADEGMNLNVQDIDAYWLQRKITLA 2909
            MVQ+ + E+++   + + S AMQMGG IDD+D   +A+EGM+LNVQDIDAYWLQRKI+ A
Sbjct: 239  MVQEEDEEEEEDVAEPNASGAMQMGGGIDDDDESGDANEGMSLNVQDIDAYWLQRKISQA 298

Query: 2908 HSSAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCT 2729
                IDPQ+ Q+LAEEVL+ILA +GD R+VEN L+  L F+KF LIK LLRNR K+VWCT
Sbjct: 299  FDQQIDPQQCQKLAEEVLKILA-EGDDREVENKLLYHLQFDKFSLIKFLLRNRLKVVWCT 357

Query: 2728 RLARSEDQEERKRIEYEMSGDGV-LRAILEQLHATRATAKERQKNLERSLREEARKLXXX 2552
            RLAR++DQEERK+IE EM G G  L AIL+QLHATRATAKERQKNLE+S+REEAR+L   
Sbjct: 358  RLARAQDQEERKKIEEEMMGLGPDLAAILDQLHATRATAKERQKNLEKSIREEARRLKDE 417

Query: 2551 XXXXXXXXXXXXXXG-MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRK 2375
                             +  WL GQRQLLDL++++F QGGL MAN+KC+LP GS R T K
Sbjct: 418  SASDGGRDRRGLVDRDADGGWL-GQRQLLDLDTLAFQQGGLFMANRKCDLPEGSQRFTNK 476

Query: 2374 GYEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLL 2195
            GYEE+H       PL   E LIKI++MPEW QPAF GM  LNRVQSRVY++AL +A+N+L
Sbjct: 477  GYEEIHVPAMKHKPLDPNEKLIKISEMPEWAQPAFKGMTQLNRVQSRVYKSALSSADNIL 536

Query: 2194 LCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLA 2015
            LCAPTGAGKTNVAVLTILQQ+ LNR  DG  + S++KIVYVAPMKALVAEVVGNLS RL 
Sbjct: 537  LCAPTGAGKTNVAVLTILQQLALNRNDDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQ 596

Query: 2014 DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXX 1835
             Y++ V+EL+GDQ+L+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK          
Sbjct: 597  MYDVKVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLL 656

Query: 1834 XDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSY 1655
             DNRGPVLESIV+RTVRQIETT+E IRLVGLSATLPNYEDVALFLRV+  KGLFYFDNSY
Sbjct: 657  HDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVNLEKGLFYFDNSY 716

Query: 1654 RPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRD 1475
            RP PLSQQYIG+ V+KPLQRFQLMND+CYEKV++ AGKHQVL+FVHSRKETAKTAR IRD
Sbjct: 717  RPVPLSQQYIGIQVKKPLQRFQLMNDLCYEKVVAVAGKHQVLIFVHSRKETAKTARAIRD 776

Query: 1474 AALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDL 1295
             AL NDT+GRF+K D  SREIL S ++ VK+ DLKD+LPYGFAIHHAGM+R D  LVEDL
Sbjct: 777  TALENDTLGRFLKEDSVSREILQSHTDMVKSNDLKDLLPYGFAIHHAGMTRGDRQLVEDL 836

Query: 1294 FGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQ 1115
            FGD H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLD+MQML RAGRPQ
Sbjct: 837  FGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQ 896

Query: 1114 YDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWL 935
            YDSYGEGIIITGHSEL+YYLSLMNQQLPIESQFVSKLAD LNAEIVLGTVQNA+EAC W+
Sbjct: 897  YDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWI 956

Query: 934  GYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQ 755
            GYTYLYIRMLRNP LYGL+ + L++D TL ERRADL+H+AATILDRNNLVKYDRKSGYFQ
Sbjct: 957  GYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQ 1016

Query: 754  VTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKL 575
            VTDLGRI+SYYYISHGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKL
Sbjct: 1017 VTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKL 1076

Query: 574  LDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVL 395
            LDRVPIPVKESLEEPSAKINVLLQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFEIVL
Sbjct: 1077 LDRVPIPVKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVL 1136

Query: 394  KRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQE 215
            KRGWAQLAE+AL L KMV+KRMWSVQTPLRQF GIPNE+L+K+EKKD +WERYYDLS QE
Sbjct: 1137 KRGWAQLAEKALNLSKMVTKRMWSVQTPLRQFNGIPNEILMKLEKKDFAWERYYDLSPQE 1196

Query: 214  IIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEP 35
            + ELIR  KMG  +++ +HQFPKL L+AH+QPITRTVLK+ELTITPDF W+++VHGYVEP
Sbjct: 1197 LGELIRFPKMGRTLHKFVHQFPKLILAAHVQPITRTVLKVELTITPDFLWDDKVHGYVEP 1256

Query: 34   FWILVEDNDGE 2
            FW++VEDNDGE
Sbjct: 1257 FWVIVEDNDGE 1267



 Score =  284 bits (726), Expect = 2e-73
 Identities = 203/726 (27%), Positives = 351/726 (48%), Gaps = 9/726 (1%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            + G K+ N +Q++V+     T +N+L+ APTG+GKT      I  +  + R      +  
Sbjct: 1357 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT------ICSEFAILRNHQKASETG 1410

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKW 1916
              + VY+AP++AL  E   +   +      + V ELTG+ ++  + +E+ QII++TPEKW
Sbjct: 1411 VMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1470

Query: 1915 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSA 1736
            D ++R+   R Y Q V               GPVLE IVSR        +  IR+V LS 
Sbjct: 1471 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALST 1530

Query: 1735 TLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVL 1556
            +L N +D+  ++    S GLF F    RP PL     GV +     R Q M    +  ++
Sbjct: 1531 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAIV 1589

Query: 1555 SCAGKHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKN 1382
              A   +  LVFV SRK    TA  +   +++  D    F+       E +    + ++ 
Sbjct: 1590 QHAKNEKPALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPA---EEVEPFIDNIQE 1646

Query: 1381 TDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT 1202
              LK  L +G    H G+++ D  +V  LF    I+V V ++++ W V L AH +++  T
Sbjct: 1647 EMLKATLRHGVGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCWGVPLTAHLVVVMGT 1706

Query: 1201 *IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIES 1022
              Y+ ++ A T+    D++QM+  A RP  D+ G+ +I+      +YY   +    P+ES
Sbjct: 1707 QYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYDAFPVES 1766

Query: 1021 QFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEE 842
                 L DN NAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +
Sbjct: 1767 HLHHFLHDNFNAEIVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSD 1823

Query: 841  RRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGD 662
              ++L+ +  + L+ +  +  +        ++ G I+SYYYIS+ T+  ++  L P    
Sbjct: 1824 HLSELVENTISDLEASKCIIIEEDMD-LSPSNHGMIASYYYISYTTIERFSSSLTPKTRM 1882

Query: 661  IELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQL 485
              L  + + + E+  + +R  E+  + +L+       +     +P  K N LLQA  S+ 
Sbjct: 1883 KGLLEVLASASEYAQLPIRPGEEEVVRRLIHHQRFSFENPKFTDPHVKANALLQAHFSRQ 1942

Query: 484  KLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLR 305
            ++ G +L  D   +  +A RLL+A+ +++   GW  LA  A+++ +MV++ +W   + L 
Sbjct: 1943 QVGG-NLKLDQEEVLLSASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGIWERDSMLL 2001

Query: 304  QFKGIPNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLD 140
            Q      ++  +  E    S E  +DL   E  E   + +M       I R  ++FP +D
Sbjct: 2002 QLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDVQLLDIARFCNRFPNID 2061

Query: 139  LSAHIQ 122
            +S  +Q
Sbjct: 2062 MSFEVQ 2067


>ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, partial [Citrus clementina]
            gi|557530629|gb|ESR41812.1| hypothetical protein
            CICLE_v100108901mg, partial [Citrus clementina]
          Length = 1791

 Score = 1528 bits (3956), Expect = 0.0
 Identities = 781/1031 (75%), Positives = 885/1031 (85%), Gaps = 4/1031 (0%)
 Frame = -3

Query: 3082 MVQDVESEDDDLGGDAHQSEAMQMGG-IDDEDME-NADEGMNLNVQDIDAYWLQRKITLA 2909
            MVQ+ + E+++   + + S AMQMGG IDD+D   +A+EGM+LNVQDIDAYWLQRKI+ A
Sbjct: 239  MVQEEDEEEEEDVAEPNASGAMQMGGGIDDDDESGDANEGMSLNVQDIDAYWLQRKISQA 298

Query: 2908 HSSAIDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCT 2729
                IDPQ+ Q+LAEEVL+ILA +GD R+VEN L+  L F+KF LIK LLRNR K+VWCT
Sbjct: 299  FDQQIDPQQCQKLAEEVLKILA-EGDDREVENKLLYHLQFDKFSLIKFLLRNRLKVVWCT 357

Query: 2728 RLARSEDQEERKRIEYEMSGDGV-LRAILEQLHATRATAKERQKNLERSLREEARKLXXX 2552
            RLAR++DQEERK+IE EM G G  L AIL+QLHATRATAKERQKNLE+S+REEAR+L   
Sbjct: 358  RLARAQDQEERKKIEEEMMGLGPDLAAILDQLHATRATAKERQKNLEKSIREEARRLKDE 417

Query: 2551 XXXXXXXXXXXXXXG-MENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRK 2375
                             +  WL GQRQLLDL++++F QGGL MAN+KC+LP GS R T K
Sbjct: 418  SASDGGRDRRGLVDRDADGGWL-GQRQLLDLDTLAFQQGGLFMANRKCDLPEGSQRFTNK 476

Query: 2374 GYEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLL 2195
            GYEE+H       PL   E LIKI++MPEW QPAF GM  LNRVQSRVY++AL +A+N+L
Sbjct: 477  GYEEIHVPAMKHKPLDPNEKLIKISEMPEWAQPAFKGMTQLNRVQSRVYKSALSSADNIL 536

Query: 2194 LCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLA 2015
            LCAPTGAGKTNVAVLTILQQ+ LNR  DG  + S++KIVYVAPMKALVAEVVGNLS RL 
Sbjct: 537  LCAPTGAGKTNVAVLTILQQLALNRNDDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQ 596

Query: 2014 DYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXX 1835
             Y++ V+EL+GDQ+L+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK          
Sbjct: 597  MYDVKVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLL 656

Query: 1834 XDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSY 1655
             DNRGPVLESIV+RTVRQIETT+E IRLVGLSATLPNYEDVALFLRV+  KGLFYFDNSY
Sbjct: 657  HDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVNLEKGLFYFDNSY 716

Query: 1654 RPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRD 1475
            RP PLSQQYIG+ V+KPLQRFQLMND+CYEKV++ AGKHQVL+FVHSRKETAKTAR IRD
Sbjct: 717  RPVPLSQQYIGIQVKKPLQRFQLMNDLCYEKVVAVAGKHQVLIFVHSRKETAKTARAIRD 776

Query: 1474 AALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDL 1295
             AL NDT+GRF+K D  SREIL S ++ VK+ DLKD+LPYGFAIHHAGM+R D  LVEDL
Sbjct: 777  TALENDTLGRFLKEDSVSREILQSHTDMVKSNDLKDLLPYGFAIHHAGMTRGDRQLVEDL 836

Query: 1294 FGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQ 1115
            FGD H+QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLD+MQML RAGRPQ
Sbjct: 837  FGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQ 896

Query: 1114 YDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWL 935
            YDSYGEGIIITGHSEL+YYLSLMNQQLPIESQFVSKLAD LNAEIVLGTVQNA+EAC W+
Sbjct: 897  YDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWI 956

Query: 934  GYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQ 755
            GYTYLYIRMLRNP LYGL+ + L++D TL ERRADL+H+AATILDRNNLVKYDRKSGYFQ
Sbjct: 957  GYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQ 1016

Query: 754  VTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKL 575
            VTDLGRI+SYYYISHGT+STYNEHLKPTMGDIELCRLFSLSEEFKYVTVR++EKMELAKL
Sbjct: 1017 VTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKL 1076

Query: 574  LDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVL 395
            LDRVPIPVKESLEEPSAKINVLLQA ISQLKLEGLSL SDMVFITQ+AGRLLRALFEIVL
Sbjct: 1077 LDRVPIPVKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVL 1136

Query: 394  KRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQE 215
            KRGWAQLAE+AL L KMV+KRMWSVQTPLRQF GIPNE+L+K+EKKD +WERYYDLS QE
Sbjct: 1137 KRGWAQLAEKALNLSKMVTKRMWSVQTPLRQFNGIPNEILMKLEKKDFAWERYYDLSPQE 1196

Query: 214  IIELIRVKKMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEP 35
            + ELIR  KMG  +++ +HQFPKL L+AH+QPITRTVLK+ELTITPDF W+++VHGYVEP
Sbjct: 1197 LGELIRFPKMGRTLHKFVHQFPKLILAAHVQPITRTVLKVELTITPDFLWDDKVHGYVEP 1256

Query: 34   FWILVEDNDGE 2
            FW++VEDNDGE
Sbjct: 1257 FWVIVEDNDGE 1267



 Score =  198 bits (504), Expect = 1e-47
 Identities = 135/445 (30%), Positives = 218/445 (48%), Gaps = 3/445 (0%)
 Frame = -3

Query: 2272 FGGMKNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLS 2093
            + G K+ N +Q++V+     T +N+L+ APTG+GKT      I  +  + R      +  
Sbjct: 1357 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT------ICSEFAILRNHQKASETG 1410

Query: 2092 SFKIVYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKW 1916
              + VY+AP++AL  E   +   +      + V ELTG+ ++  + +E+ QII++TPEKW
Sbjct: 1411 VMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1470

Query: 1915 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSA 1736
            D ++R+   R Y Q V               GPVLE IVSR        +  IR+V LS 
Sbjct: 1471 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALST 1530

Query: 1735 TLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVL 1556
            +L N +D+  ++    S GLF F    RP PL     GV +     R Q M    +  ++
Sbjct: 1531 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAIV 1589

Query: 1555 SCAGKHQ-VLVFVHSRKETAKTARHIRD-AALANDTIGRFVKGDGASREILHSESEKVKN 1382
              A   +  LVFV SRK    TA  +   +++  D    F+       E +    + ++ 
Sbjct: 1590 QHAKNEKPALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPA---EEVEPFIDNIQE 1646

Query: 1381 TDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT 1202
              LK  L +G    H G+++ D  +V  LF    I+V V ++++ W V L AH +++  T
Sbjct: 1647 EMLKATLRHGVGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCWGVPLTAHLVVVMGT 1706

Query: 1201 *IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIES 1022
              Y+ ++ A T+    D++QM+  A RP  D+ G+ +I+      +YY   +    P+ES
Sbjct: 1707 QYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYDAFPVES 1766

Query: 1021 QFVSKLADNLNAEIVLGTVQNAREA 947
                 L DN NAEIV G ++N ++A
Sbjct: 1767 HLHHFLHDNFNAEIVAGVIENKQDA 1791


>ref|XP_002966396.1| hypothetical protein SELMODRAFT_144158 [Selaginella moellendorffii]
            gi|300165816|gb|EFJ32423.1| hypothetical protein
            SELMODRAFT_144158 [Selaginella moellendorffii]
          Length = 2164

 Score = 1528 bits (3955), Expect = 0.0
 Identities = 766/1023 (74%), Positives = 880/1023 (86%), Gaps = 1/1023 (0%)
 Frame = -3

Query: 3067 ESEDDDLGGDAHQSEAMQMGGIDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSAIDP 2888
            ESE+++ G + +++ AMQMGG+DDEDME ADEG  LNVQDIDAYWLQRKIT A+   I+P
Sbjct: 232  ESENEEDGQETNEASAMQMGGLDDEDMEEADEG--LNVQDIDAYWLQRKITQAYEE-IEP 288

Query: 2887 QRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSED 2708
            Q SQ+LAEEVL+ L G+GD RDVEN LV LLD++KF LIKLLL+NR KIVWCTRLARS+D
Sbjct: 289  QHSQKLAEEVLQTL-GEGDERDVENRLVMLLDYDKFGLIKLLLKNRWKIVWCTRLARSQD 347

Query: 2707 QEERKRIEYEMSGDG-VLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXX 2531
             +ERKRIE EM+  G VL  ILEQLHATRATAKERQKNLERS+REEARKL          
Sbjct: 348  DKERKRIEDEMTEGGPVLSGILEQLHATRATAKERQKNLERSIREEARKLREEGGDGEKD 407

Query: 2530 XXXXXXXGMENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXX 2351
                    +E  W +GQRQ LDL+ ++F + GL MANKKCELP G++R+ +KGYEEVH  
Sbjct: 408  RRPEREVVLEGGW-QGQRQFLDLKDLAFEKEGLFMANKKCELPEGTYRTMKKGYEEVHVP 466

Query: 2350 XXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAG 2171
                 P+ +GE+L+KI+D+P W QPAF  MK LNR+QSRVYETALFT EN+LLCAPTGAG
Sbjct: 467  AMKVKPMEEGEELVKISDLPSWAQPAFKEMKTLNRIQSRVYETALFTQENILLCAPTGAG 526

Query: 2170 KTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKE 1991
            KTNVA+LTILQ++G  +  DG  DLS  KIVY+APMKALVAE+VGNL KRLADY + VKE
Sbjct: 527  KTNVALLTILQELGSKQESDGTFDLSHTKIVYIAPMKALVAEMVGNLQKRLADYGVVVKE 586

Query: 1990 LTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVL 1811
            LTGDQSLSRQQIEET IIV TPEKWDIITRKSGDR YTQLVK           D RGPVL
Sbjct: 587  LTGDQSLSRQQIEETHIIVATPEKWDIITRKSGDRAYTQLVKLVIIDEIHLLHDGRGPVL 646

Query: 1810 ESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQ 1631
            ESIV+RT+RQ+ETT +MIRLVGLSATLPNY DV++FLRVDKS+GLF+FDNS+RP PLSQQ
Sbjct: 647  ESIVARTLRQVETTHDMIRLVGLSATLPNYVDVSMFLRVDKSRGLFHFDNSFRPVPLSQQ 706

Query: 1630 YIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTI 1451
            Y+G++V+KPLQRFQLMN+ICYEKVL+ AGK Q+L+FVHSRKETAKTA+ IRD+AL NDT+
Sbjct: 707  YVGISVKKPLQRFQLMNEICYEKVLAVAGKSQILIFVHSRKETAKTAKAIRDSALTNDTL 766

Query: 1450 GRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQV 1271
            G+F+KGD AS EIL +E+E VKNTDLK +L YGFAIHHAGM+R D TLVE+LF D HIQV
Sbjct: 767  GKFLKGDSASSEILRTEAENVKNTDLKGLLSYGFAIHHAGMARADRTLVEELFADGHIQV 826

Query: 1270 LVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGI 1091
            LVSTA LAW VNLPAHT+IIK T +YNPEKGAWTELSP+DVMQML RAGRPQ+DS GEGI
Sbjct: 827  LVSTATLAWGVNLPAHTVIIKGTQVYNPEKGAWTELSPMDVMQMLGRAGRPQFDSTGEGI 886

Query: 1090 IITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIR 911
            IITGHSEL YYLSLMNQQLPIESQF+SKL DNLNAEIVLGTVQNAREAC WLGYTYLYIR
Sbjct: 887  IITGHSELSYYLSLMNQQLPIESQFISKLPDNLNAEIVLGTVQNAREACAWLGYTYLYIR 946

Query: 910  MLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRIS 731
            MLRNP+LYG++ + LE D TLEERRADLIH+AATILD+NNLVKYDRKSGYFQVTDLGRI+
Sbjct: 947  MLRNPLLYGVNPEVLETDETLEERRADLIHTAATILDKNNLVKYDRKSGYFQVTDLGRIA 1006

Query: 730  SYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV 551
            S+YYISHGTM+TYNEHLKPTMG+IELCRLFS SEEFK V VREEEK+ELAKLLDRVP+PV
Sbjct: 1007 SHYYISHGTMATYNEHLKPTMGEIELCRLFSQSEEFKNVGVREEEKLELAKLLDRVPVPV 1066

Query: 550  KESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLA 371
            KESLEEPSAKINVLLQA ISQLKLEG SL +DM FITQ+AGRL+RALFEIVLKRGWAQLA
Sbjct: 1067 KESLEEPSAKINVLLQAYISQLKLEGFSLFTDMTFITQSAGRLMRALFEIVLKRGWAQLA 1126

Query: 370  ERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELIRVK 191
            E+AL LCKMV +RMWS QTPLRQFKGIP +VL KIEKKD +WERYYDL++QEI ELIR+ 
Sbjct: 1127 EKALNLCKMVQRRMWSTQTPLRQFKGIPIDVLTKIEKKDYAWERYYDLTSQEIGELIRIP 1186

Query: 190  KMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWILVEDN 11
            K+G  I++ +HQFPKL+LSAH+QPITR+VLK++LTITPDF W+E++HG+VEPFW++VEDN
Sbjct: 1187 KLGKMIHKFVHQFPKLELSAHVQPITRSVLKVDLTITPDFQWDEKIHGFVEPFWVIVEDN 1246

Query: 10   DGE 2
            DGE
Sbjct: 1247 DGE 1249



 Score =  292 bits (748), Expect = 6e-76
 Identities = 207/729 (28%), Positives = 361/729 (49%), Gaps = 10/729 (1%)
 Frame = -3

Query: 2281 QPAFGGM----KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGP 2114
            +P+F  +    K+ N +Q++V+     T +N+L+ APTG+GKT      +L+ +  N   
Sbjct: 1332 EPSFEALYQQFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFAVLRMLQKNA-- 1389

Query: 2113 DGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIV 1934
                D    K VY+AP +AL  E   +  K+ AD  + V +LTG+ ++  + ++  Q+I+
Sbjct: 1390 ----DTGGGKCVYIAPKEALAKERFEDWEKKFADLKVQVVQLTGETAMDLKLLDRGQVII 1445

Query: 1933 TTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIR 1754
            +TPE+WD+++R+   R     V               GPVLE IVSR     +   + IR
Sbjct: 1446 STPERWDVLSRRWKQRKQIGQVNLFLVDELHLIGGEGGPVLEVIVSRMRYISKQAGDKIR 1505

Query: 1753 LVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDI 1574
            +V LSA+L N +D+  ++    S GLF F  + RP PL     GV +     R Q M   
Sbjct: 1506 IVALSASLANAKDLGDWIGAS-SHGLFNFSPAVRPVPLEIHIQGVDITNFEARVQAMTKP 1564

Query: 1573 CYEKVLSCA-GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1397
             +  +L  A G    LVFV +RK    TA  +   ALA      F++    + + L    
Sbjct: 1565 TFTAILQHAKGGKPALVFVPTRKHARSTASDLVLYALAGGN--SFLQ---CTEKDLEPLL 1619

Query: 1396 EKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTI 1217
            E++++ +LK+ L  G    H G+S  +  +V +LF    IQV V+++++ W + L AH +
Sbjct: 1620 ERIRDPELKETLQGGVGYLHEGLSPTEQEIVGELFSAGAIQVCVASSSMCWGMTLTAHLL 1679

Query: 1216 IIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 1037
            ++  T  Y+  + A T+    D++QM+ RA RP  DS G+ +I+      +YY   + + 
Sbjct: 1680 VVMGTQYYDGRENAHTDYPITDLLQMMGRASRPLVDSSGKCVILCHAPRKEYYKKFLYEP 1739

Query: 1036 LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 857
             P+ES     + D+LNAEIV+ T++N ++A  +L +T +Y R+ +NP  Y L        
Sbjct: 1740 FPVESHLDHYIHDHLNAEIVVHTIENKQDAVDYLTWTLMYRRLTQNPNYYNLQG---VSH 1796

Query: 856  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 677
              L +  ++L+ S    L+ +  +  +         +LG I+SYYYI + T+  ++  L 
Sbjct: 1797 RHLSDHLSELVESTLNDLESSKCIAVE-DDMELSPLNLGMIASYYYIRYTTIELFSNSLT 1855

Query: 676  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQA 500
                   L  + + + E+  + VR  E+  + KL++     V K    +P  K N LLQA
Sbjct: 1856 AKTKMKGLLEILASASEYATLPVRPGEEDIVRKLVNHQRFSVDKPKYSDPHLKANALLQA 1915

Query: 499  RISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSV 320
              S+  + G +L  D   +   A +LL+A+ +++    W   A  A+++ +MV++ +W  
Sbjct: 1916 HFSRHPVPG-NLAMDQREVLLQAIKLLQAMVDVIASNAWLNPALAAMEISQMVTQGLWER 1974

Query: 319  QTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELIRVKKMGGQ----IYRCIHQF 152
             + L Q      ++  K +++++  E  +DL   E  E   +  M       I R  ++F
Sbjct: 1975 DSVLLQLPHFTKDLAKKCKERNV--ETVFDLLEMEDGERRELLGMDDSQLLAIARTCNRF 2032

Query: 151  PKLDLSAHI 125
            P +D++  +
Sbjct: 2033 PNIDMAFEV 2041


>ref|XP_002978166.1| hypothetical protein SELMODRAFT_108064 [Selaginella moellendorffii]
            gi|300154187|gb|EFJ20823.1| hypothetical protein
            SELMODRAFT_108064 [Selaginella moellendorffii]
          Length = 2164

 Score = 1527 bits (3953), Expect = 0.0
 Identities = 765/1023 (74%), Positives = 880/1023 (86%), Gaps = 1/1023 (0%)
 Frame = -3

Query: 3067 ESEDDDLGGDAHQSEAMQMGGIDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSAIDP 2888
            ESE+++ G + +++ AMQMGG+DDEDME ADEG  LNVQDIDAYWLQRKIT A+   I+P
Sbjct: 232  ESENEEDGQETNEASAMQMGGLDDEDMEEADEG--LNVQDIDAYWLQRKITQAYEE-IEP 288

Query: 2887 QRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLARSED 2708
            Q SQ+LAEEVL+ L G+GD RDVEN LV LLD++KF LIKLLL+NR KIVWCTRLARS+D
Sbjct: 289  QHSQKLAEEVLQTL-GEGDERDVENRLVMLLDYDKFGLIKLLLKNRWKIVWCTRLARSQD 347

Query: 2707 QEERKRIEYEMS-GDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXXXX 2531
             +ERKRIE EM+ G  VL  ILEQLHATRATAKERQKNLERS+REEARKL          
Sbjct: 348  DKERKRIEDEMTEGGSVLSGILEQLHATRATAKERQKNLERSIREEARKLREEGGDGEKD 407

Query: 2530 XXXXXXXGMENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRSTRKGYEEVHXX 2351
                    +E  W +GQRQ LDL+ ++F + GL MANKKCELP G++R+ +KGYEEVH  
Sbjct: 408  RRPEREVVLEGGW-QGQRQFLDLKDLAFEKEGLFMANKKCELPEGTYRTMKKGYEEVHVP 466

Query: 2350 XXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAENLLLCAPTGAG 2171
                 P+ +GE+L+KI+D+P W QPAF  MK LNR+QSRVYETALFT EN+LLCAPTGAG
Sbjct: 467  AMKVKPMEEGEELVKISDLPSWAQPAFKEMKTLNRIQSRVYETALFTQENILLCAPTGAG 526

Query: 2170 KTNVAVLTILQQIGLNRGPDGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKE 1991
            KTNVA+LTILQ++G  +  DG  DLS  KIVY+APMKALVAE+VGNL KRLADY + VKE
Sbjct: 527  KTNVALLTILQELGSKQESDGTFDLSHTKIVYIAPMKALVAEMVGNLQKRLADYGVVVKE 586

Query: 1990 LTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVL 1811
            LTGDQSLSRQQIEET IIV TPEKWDIITRKSGDR YTQLVK           D RGPVL
Sbjct: 587  LTGDQSLSRQQIEETHIIVATPEKWDIITRKSGDRAYTQLVKLVIIDEIHLLHDGRGPVL 646

Query: 1810 ESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQ 1631
            ESIV+RT+RQ+ETT +MIRLVGLSATLPNY DV++FLRVDKS+GLF+FDNS+RP PLSQQ
Sbjct: 647  ESIVARTLRQVETTHDMIRLVGLSATLPNYVDVSMFLRVDKSRGLFHFDNSFRPVPLSQQ 706

Query: 1630 YIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTARHIRDAALANDTI 1451
            Y+G++V+KPLQRFQLMN+ICYEKVL+ AGK Q+L+FVHSRKETAKTA+ IRD+AL NDT+
Sbjct: 707  YVGISVKKPLQRFQLMNEICYEKVLAVAGKSQILIFVHSRKETAKTAKAIRDSALTNDTL 766

Query: 1450 GRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQV 1271
            G+F+KGD AS EIL +E+E VKNTDLK +L YGFAIHHAGM+R D TLVE+LF D HIQV
Sbjct: 767  GKFLKGDSASSEILRTEAENVKNTDLKGLLSYGFAIHHAGMARADRTLVEELFADGHIQV 826

Query: 1270 LVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGI 1091
            LVSTA LAW VNLPAHT+IIK T +YNPEKGAWTELSP+DVMQML RAGRPQ+DS GEGI
Sbjct: 827  LVSTATLAWGVNLPAHTVIIKGTQVYNPEKGAWTELSPMDVMQMLGRAGRPQFDSTGEGI 886

Query: 1090 IITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIR 911
            IITGHSEL YYLSLMNQQLPIESQF+SKL DNLNAEIVLG+VQNAREAC WLGYTYLYIR
Sbjct: 887  IITGHSELSYYLSLMNQQLPIESQFISKLPDNLNAEIVLGSVQNAREACAWLGYTYLYIR 946

Query: 910  MLRNPVLYGLSADALEKDNTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRIS 731
            MLRNP+LYG++ + LE D TLEERRADLIH+AATILD+NNLVKYDRKSGYFQVTDLGRI+
Sbjct: 947  MLRNPLLYGVNPEVLETDETLEERRADLIHTAATILDKNNLVKYDRKSGYFQVTDLGRIA 1006

Query: 730  SYYYISHGTMSTYNEHLKPTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV 551
            S+YYISHGTM+TYNEHLKPTMG+IELCRLFS SEEFK V VREEEK+ELAKLLDRVP+PV
Sbjct: 1007 SHYYISHGTMATYNEHLKPTMGEIELCRLFSQSEEFKNVGVREEEKLELAKLLDRVPVPV 1066

Query: 550  KESLEEPSAKINVLLQARISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLA 371
            KESLEEPSAKINVLLQA ISQLKLEG SL +DM FITQ+AGRL+RALFEIVLKRGWAQLA
Sbjct: 1067 KESLEEPSAKINVLLQAYISQLKLEGFSLFTDMTFITQSAGRLMRALFEIVLKRGWAQLA 1126

Query: 370  ERALKLCKMVSKRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELIRVK 191
            E+AL LCKMV +RMWS QTPLRQFKGIP +VL KIEKKD +WERYYDL++QEI ELIR+ 
Sbjct: 1127 EKALNLCKMVQRRMWSTQTPLRQFKGIPIDVLTKIEKKDYAWERYYDLTSQEIGELIRIP 1186

Query: 190  KMGGQIYRCIHQFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWILVEDN 11
            K+G  I++ +HQFPKL+LSAH+QPITR+VLK++LTITPDF W+E++HG+VEPFW++VEDN
Sbjct: 1187 KLGKMIHKFVHQFPKLELSAHVQPITRSVLKVDLTITPDFQWDEKIHGFVEPFWVIVEDN 1246

Query: 10   DGE 2
            DGE
Sbjct: 1247 DGE 1249



 Score =  292 bits (748), Expect = 6e-76
 Identities = 207/729 (28%), Positives = 361/729 (49%), Gaps = 10/729 (1%)
 Frame = -3

Query: 2281 QPAFGGM----KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGP 2114
            +P+F  +    K+ N +Q++V+     T +N+L+ APTG+GKT      +L+ +  N   
Sbjct: 1332 EPSFEALYQQFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFAVLRMLQKNA-- 1389

Query: 2113 DGELDLSSFKIVYVAPMKALVAEVVGNLSKRLADYNITVKELTGDQSLSRQQIEETQIIV 1934
                D    K VY+AP +AL  E   +  K+ AD  + V +LTG+ ++  + ++  Q+I+
Sbjct: 1390 ----DTGGGKCVYIAPKEALAKERFEDWEKKFADLKVQVVQLTGETAMDLKLLDRGQVII 1445

Query: 1933 TTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIR 1754
            +TPE+WD+++R+   R     V               GPVLE IVSR     +   + IR
Sbjct: 1446 STPERWDVLSRRWKQRKQIGQVNLFLVDELHLIGGEGGPVLEVIVSRMRYISKQAGDKIR 1505

Query: 1753 LVGLSATLPNYEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDI 1574
            +V LSA+L N +D+  ++    S GLF F  + RP PL     GV +     R Q M   
Sbjct: 1506 IVALSASLANAKDLGDWIGAS-SHGLFNFSPAVRPVPLEIHIQGVDITNFEARVQAMTKP 1564

Query: 1573 CYEKVLSCA-GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSES 1397
             +  +L  A G    LVFV +RK    TA  +   ALA      F++    + + L    
Sbjct: 1565 TFTAILQHAKGGKPALVFVPTRKHARSTASDLVLYALAGGN--SFLQ---CTEKDLEPLL 1619

Query: 1396 EKVKNTDLKDMLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTI 1217
            E++++ +LK+ L  G    H G+S  +  +V +LF    IQV V+++++ W + L AH +
Sbjct: 1620 ERIRDPELKETLQGGVGYLHEGLSPTEQDIVGELFSAGAIQVCVASSSMCWGMTLTAHLL 1679

Query: 1216 IIKCT*IYNPEKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQ 1037
            ++  T  Y+  + A T+    D++QM+ RA RP  DS G+ +I+      +YY   + + 
Sbjct: 1680 VVMGTQYYDGRENAHTDYPITDLLQMMGRASRPLVDSSGKCVILCHAPRKEYYKKFLYEP 1739

Query: 1036 LPIESQFVSKLADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKD 857
             P+ES     + D+LNAEIV+ T++N ++A  +L +T +Y R+ +NP  Y L        
Sbjct: 1740 FPVESHLDHYIHDHLNAEIVVHTIENKQDAVDYLTWTLMYRRLTQNPNYYNLQG---VSH 1796

Query: 856  NTLEERRADLIHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLK 677
              L +  ++L+ S    L+ +  +  +         +LG I+SYYYI + T+  ++  L 
Sbjct: 1797 RHLSDHLSELVESTLNDLESSKCIAVE-DDMELSPLNLGMIASYYYIRYTTIELFSNSLT 1855

Query: 676  PTMGDIELCRLFSLSEEFKYVTVREEEKMELAKLLDRVPIPV-KESLEEPSAKINVLLQA 500
                   L  + + + E+  + VR  E+  + KL++     V K    +P  K N LLQA
Sbjct: 1856 AKTKMKGLLEILASASEYATLPVRPGEEDIVRKLVNHQRFSVDKPKYSDPHLKANALLQA 1915

Query: 499  RISQLKLEGLSLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSV 320
              S+  + G +L  D   +   A +LL+A+ +++    W   A  A+++ +MV++ +W  
Sbjct: 1916 HFSRHPVPG-NLAMDQREVLLQAIKLLQAMVDVIASNAWLNPALAAMEISQMVTQGLWER 1974

Query: 319  QTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELIRVKKMGGQ----IYRCIHQF 152
             + L Q      ++  K +++++  E  +DL   E  E   +  M       I R  ++F
Sbjct: 1975 DSVLLQLPHFTKDLAKKCKERNV--ETVFDLLEMEDGERRELLGMDDSQLLAIARTCNRF 2032

Query: 151  PKLDLSAHI 125
            P +D++  +
Sbjct: 2033 PNIDMAFEV 2041


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score = 1525 bits (3949), Expect = 0.0
 Identities = 784/1072 (73%), Positives = 888/1072 (82%), Gaps = 47/1072 (4%)
 Frame = -3

Query: 3076 QDVESEDDDLGGDAHQSEAMQMGGIDDEDMENADEGMNLNVQDIDAYWLQRKITLAHSSA 2897
            +D E EDD + G+   S  MQMGGIDDEDME+A+EGMNLNVQDIDAYWLQRKI+ A+   
Sbjct: 244  EDEEDEDDVVEGNG--SGGMQMGGIDDEDMEDANEGMNLNVQDIDAYWLQRKISHAYEQL 301

Query: 2896 IDPQRSQQLAEEVLRILAGDGDSRDVENSLVTLLDFEKFDLIKLLLRNRHKIVWCTRLAR 2717
            IDP + Q+LA EVL+ILA D D R+VEN L+  L+++KF LIK LLRNR KI+WCTRLAR
Sbjct: 302  IDPDQCQKLAGEVLKILA-DPDDREVENKLLFHLEYDKFSLIKFLLRNRLKILWCTRLAR 360

Query: 2716 SEDQEERKRIEYEMSGDGVLRAILEQLHATRATAKERQKNLERSLREEARKLXXXXXXXX 2537
            ++DQEER+ IE EM    +L+ ILEQLHATRA+AKERQKNLE+S+REEAR+L        
Sbjct: 361  AQDQEERETIEEEMKESDLLQPILEQLHATRASAKERQKNLEKSIREEARRLKDDTVGDG 420

Query: 2536 XXXXXXXXXGM---------ENSWLKGQRQLLDLESISFHQGGLLMANKKCELPHGSFRS 2384
                      +         E+ WLKGQRQ+LDL++++F QGGL MA KKC+LP GS+R 
Sbjct: 421  DKERDRDRDRIRRGAGDRDGESGWLKGQRQMLDLDNLTFEQGGLFMAKKKCDLPDGSYRH 480

Query: 2383 TRKGYEEVHXXXXXXXPLSDGEDLIKITDMPEWVQPAFGGMKNLNRVQSRVYETALFTAE 2204
              KGYEE+H       PL   E L+KI+ MP+W QPAF GM  LNRVQS+VYETALF  +
Sbjct: 481  LEKGYEEIHVPALKAKPLDPNEKLLKISAMPDWAQPAFKGMTQLNRVQSKVYETALFKPD 540

Query: 2203 NLLLCAPTGAGKTNVAVLTILQQIGLNRGPD-GELDLSSFKIVYVAPMKALVAEVVGNLS 2027
            NLLLCAPTGAGKTNVAVLTILQQI  +R  D G +D S++KIVYVAPMKALVAEVVGNLS
Sbjct: 541  NLLLCAPTGAGKTNVAVLTILQQIARHRNTDDGSIDHSAYKIVYVAPMKALVAEVVGNLS 600

Query: 2026 KRLADYNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXX 1847
             RL DYN+TV+EL+GDQSL+RQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK      
Sbjct: 601  NRLQDYNVTVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDE 660

Query: 1846 XXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPNYEDVALFLRVDKSKGLFYF 1667
                 DNRGPVLESIV+RTVRQIET+++ IRLVGLSATLPNYEDVALFLRVD +KGLFYF
Sbjct: 661  IHLLHDNRGPVLESIVARTVRQIETSKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYF 720

Query: 1666 DNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCAGKHQVLVFVHSRKETAKTAR 1487
            DNSYRP PLSQQYIG+T++KPLQRFQLMNDICY KVL  AGKHQVL+FVHSRKETAKTAR
Sbjct: 721  DNSYRPVPLSQQYIGITIKKPLQRFQLMNDICYRKVLDVAGKHQVLIFVHSRKETAKTAR 780

Query: 1486 HIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKDMLPYGFAIHHAGMSRVDCTL 1307
             IRDAALA+DT+GRF+K D ASREILH+ ++ VK++DLKD+LPYGFAIHHAGM+R D  L
Sbjct: 781  AIRDAALADDTLGRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQL 840

Query: 1306 VEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNPEKGAWTELSPLDVMQMLCRA 1127
            VEDLF D H QVLVSTA LAW VNLPAHT+IIK T IYNPEKGAWTELSPLDVMQML RA
Sbjct: 841  VEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRA 900

Query: 1126 GRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADNLNAEIVLGTVQNAREA 947
            GRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQF+SKLAD LNAEIVLGTVQNA+EA
Sbjct: 901  GRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEA 960

Query: 946  CTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL---------------IHSAA 812
            C W+GYTYLY+RMLRNP LYGL+ D L +D TLEERRADL               IH+AA
Sbjct: 961  CHWIGYTYLYVRMLRNPSLYGLAPDVLSRDITLEERRADLFIELLEKGTKSLWTIIHTAA 1020

Query: 811  TILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCRLFSLS 632
            TILDRNNLVKYDRKSGYFQVTDLGRI+SYYYI+HGT+STYNEHLKPTMGDIELCRLFSLS
Sbjct: 1021 TILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 1080

Query: 631  EEFKYVTVREEEKMELAKLLDRVPIPVKESLEEPSAKINVLLQARISQLKLEGLSLMSDM 452
            EEFKYVTVR++EKMELAKLLDRVPIP+KESLEEPSAKINVLLQA ISQLKLEGLS+ SDM
Sbjct: 1081 EEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSMTSDM 1140

Query: 451  VFIT----------------------QNAGRLLRALFEIVLKRGWAQLAERALKLCKMVS 338
            VFIT                      Q+AGRLLRALFEIVLKRGWAQLAE+AL LCKMV+
Sbjct: 1141 VFITQFIRSGVPLILLFADSCIMFLFQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVT 1200

Query: 337  KRMWSVQTPLRQFKGIPNEVLIKIEKKDISWERYYDLSAQEIIELIRVKKMGGQIYRCIH 158
            KRMWSVQTPLRQF GIP++VL K+EKKD++WERYYDLS+QEI ELIR  KMG  ++R IH
Sbjct: 1201 KRMWSVQTPLRQFNGIPSDVLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHRFIH 1260

Query: 157  QFPKLDLSAHIQPITRTVLKMELTITPDFNWEEQVHGYVEPFWILVEDNDGE 2
            QFPKL+L+AH+QPITRTVL +ELTITPDF W++++HGYVEPFW++VEDNDGE
Sbjct: 1261 QFPKLNLAAHVQPITRTVLGVELTITPDFAWDDRMHGYVEPFWVIVEDNDGE 1312



 Score =  288 bits (738), Expect = 9e-75
 Identities = 213/720 (29%), Positives = 351/720 (48%), Gaps = 8/720 (1%)
 Frame = -3

Query: 2260 KNLNRVQSRVYETALFTAENLLLCAPTGAGKTNVAVLTILQQIGLNRGPDGELDLSSFKI 2081
            K+ N VQ++V+     + +N+L+ APTG+GKT  A   IL+     + PD     S  ++
Sbjct: 1406 KHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNH--QKLPD-----SVMRV 1458

Query: 2080 VYVAPMKALVAEVVGNLSKRLAD-YNITVKELTGDQSLSRQQIEETQIIVTTPEKWDIIT 1904
            VY+AP++AL  E   +  K+      + V ELTG+ +   + +E+ Q+I++TPEKWD ++
Sbjct: 1459 VYIAPVEALAKERYRDWEKKFGGGLKLKVVELTGETATDLKLLEKGQVIISTPEKWDALS 1518

Query: 1903 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIVSRTVRQIETTQEMIRLVGLSATLPN 1724
            R+   R + Q V               GPVLE IVSR        +  IR+V LS +L N
Sbjct: 1519 RRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYISSQLENKIRIVALSTSLAN 1578

Query: 1723 YEDVALFLRVDKSKGLFYFDNSYRPCPLSQQYIGVTVRKPLQRFQLMNDICYEKVLSCA- 1547
             +D+  ++    S GLF F    RP PL     GV +     R Q M    Y  +   A 
Sbjct: 1579 AKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIAQHAK 1637

Query: 1546 GKHQVLVFVHSRKETAKTARHIRDAALANDTIGRFVKGDGASREILHSESEKVKNTDLKD 1367
             K   +VFV +RK    TA  +   + A+     F+     S E L     K+ +  LK 
Sbjct: 1638 NKKPAIVFVPTRKHVRLTAVDLITYSGADSGEKPFLL---RSLEELEPFINKISDEMLKV 1694

Query: 1366 MLPYGFAIHHAGMSRVDCTLVEDLFGDRHIQVLVSTANLAWEVNLPAHTIIIKCT*IYNP 1187
             L  G    H G++ +D  +V  LF    IQV V ++++ W V L AH +++  T  Y+ 
Sbjct: 1695 TLREGVGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDG 1754

Query: 1186 EKGAWTELSPLDVMQMLCRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK 1007
             + A T+    D++QM+  A RP  D+ G+ +I+      +YY   + +  P+ES     
Sbjct: 1755 RENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHF 1814

Query: 1006 LADNLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLSADALEKDNTLEERRADL 827
            L DNLNAEIV G ++N ++A  +L +T++Y R+ +NP  Y L          L +  +++
Sbjct: 1815 LHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSEM 1871

Query: 826  IHSAATILDRNNLVKYDRKSGYFQVTDLGRISSYYYISHGTMSTYNEHLKPTMGDIELCR 647
            + +  + L+ +  V  +         +LG I+SYYYIS+ T+  ++  L        L  
Sbjct: 1872 VENTLSDLEASKCVSIEDDMD-LSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLE 1930

Query: 646  LFSLSEEFKYVTVREEEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQARISQLKLEGL 470
            + S + E+ ++ +R  E+  + +L++      +   + +P  K N LLQA  S+  + G 
Sbjct: 1931 VLSSASEYAHLPIRPGEEEVVRRLINHQRFSFENPKVTDPHVKANALLQAHFSRQSVGG- 1989

Query: 469  SLMSDMVFITQNAGRLLRALFEIVLKRGWAQLAERALKLCKMVSKRMWSVQTPLRQFKGI 290
            +L  D   +  +A RLL+A+ +++   GW  +A  A+++ +MV++ MW   + L Q    
Sbjct: 1990 NLSLDQREVLLSANRLLQAMVDVISSNGWLSMALLAMEVSQMVTQGMWERDSMLLQLPHF 2049

Query: 289  PNEVLIKI-EKKDISWERYYDLSAQEIIELIRVKKMGG----QIYRCIHQFPKLDLSAHI 125
              ++  K  E    S E  +DL   E  E   +  M       I R  ++FP +DLS  I
Sbjct: 2050 TKDLAKKCQENPGRSIETVFDLLEMEDDERRELLNMTDSQLLDIARFCNRFPNIDLSYEI 2109