BLASTX nr result
ID: Ephedra26_contig00004111
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00004111
(622 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indi... 102 7e-20
gb|ABK20899.1| unknown [Picea sitchensis] gi|116778837|gb|ABK210... 102 1e-19
gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii] 100 3e-19
gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu] 100 3e-19
tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays] 100 3e-19
tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays] 100 3e-19
gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japo... 100 3e-19
gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indi... 100 3e-19
gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays] 100 3e-19
ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group] g... 100 3e-19
gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticu... 100 3e-19
ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831... 100 3e-19
ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [B... 100 3e-19
ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [B... 100 3e-19
emb|CBI29957.3| unnamed protein product [Vitis vinifera] 100 4e-19
ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citr... 99 7e-19
gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus pe... 99 7e-19
ref|XP_002281530.1| PREDICTED: 40S ribosomal protein S28-like [V... 99 7e-19
gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis] 99 1e-18
ref|XP_001758744.1| predicted protein [Physcomitrella patens] gi... 99 1e-18
>gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indica Group]
Length = 400
Score = 102 bits (255), Expect = 7e-20
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +2
Query: 98 RMDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
RMD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 335 RMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 388
>gb|ABK20899.1| unknown [Picea sitchensis] gi|116778837|gb|ABK21020.1| unknown
[Picea sitchensis] gi|116779805|gb|ABK21436.1| unknown
[Picea sitchensis] gi|116779938|gb|ABK21486.1| unknown
[Picea sitchensis] gi|116779954|gb|ABK21493.1| unknown
[Picea sitchensis] gi|116779984|gb|ABK21504.1| unknown
[Picea sitchensis] gi|116780339|gb|ABK21639.1| unknown
[Picea sitchensis] gi|116780954|gb|ABK21897.1| unknown
[Picea sitchensis] gi|116788726|gb|ABK24977.1| unknown
[Picea sitchensis] gi|116790627|gb|ABK25683.1| unknown
[Picea sitchensis] gi|148906383|gb|ABR16346.1| unknown
[Picea sitchensis] gi|148907364|gb|ABR16816.1| unknown
[Picea sitchensis] gi|148907622|gb|ABR16940.1| unknown
[Picea sitchensis] gi|148908891|gb|ABR17550.1| unknown
[Picea sitchensis] gi|148908941|gb|ABR17575.1| unknown
[Picea sitchensis] gi|148909740|gb|ABR17961.1| unknown
[Picea sitchensis] gi|148910472|gb|ABR18311.1| unknown
[Picea sitchensis] gi|148910818|gb|ABR18475.1| unknown
[Picea sitchensis] gi|224285480|gb|ACN40462.1| unknown
[Picea sitchensis] gi|224286119|gb|ACN40770.1| unknown
[Picea sitchensis]
Length = 65
Score = 102 bits (253), Expect = 1e-19
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+GVKLAVVVKV+GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGD+LT
Sbjct: 1 MDTGVKLAVVVKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDVLT 53
>gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii]
Length = 107
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 43 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 95
>gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu]
Length = 115
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 51 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 103
>tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays]
Length = 68
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 4 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 56
>tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays]
Length = 103
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 39 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 91
>gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japonica Group]
Length = 93
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 29 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 81
>gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indica Group]
Length = 101
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 37 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 89
>gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 53
>ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group]
gi|226492207|ref|NP_001147283.1| 40S ribosomal protein
S28 [Zea mays] gi|226528567|ref|NP_001147474.1| 40S
ribosomal protein S28 [Zea mays]
gi|226530547|ref|NP_001147106.1| 40S ribosomal protein
S28 [Zea mays] gi|297600386|ref|NP_001049079.2|
Os03g0167100 [Oryza sativa Japonica Group]
gi|242042107|ref|XP_002468448.1| hypothetical protein
SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|514816860|ref|XP_004983165.1| PREDICTED: 40S
ribosomal protein S28-like [Setaria italica]
gi|514821804|ref|XP_004985578.1| PREDICTED: 40S
ribosomal protein S28-like [Setaria italica]
gi|582044877|pdb|3J60|CC Chain c, Localization Of The
Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|113639193|dbj|BAF26498.1| Os10g0411700 [Oryza sativa
Japonica Group] gi|194704454|gb|ACF86311.1| unknown [Zea
mays] gi|195605026|gb|ACG24343.1| 40S ribosomal protein
S28 [Zea mays] gi|195605034|gb|ACG24347.1| 40S ribosomal
protein S28 [Zea mays] gi|195607258|gb|ACG25459.1| 40S
ribosomal protein S28 [Zea mays]
gi|195609472|gb|ACG26566.1| 40S ribosomal protein S28
[Zea mays] gi|195609816|gb|ACG26738.1| 40S ribosomal
protein S28 [Zea mays] gi|195610066|gb|ACG26863.1| 40S
ribosomal protein S28 [Zea mays]
gi|195611640|gb|ACG27650.1| 40S ribosomal protein S28
[Zea mays] gi|195618106|gb|ACG30883.1| 40S ribosomal
protein S28 [Zea mays] gi|195618338|gb|ACG30999.1| 40S
ribosomal protein S28 [Zea mays]
gi|195618690|gb|ACG31175.1| 40S ribosomal protein S28
[Zea mays] gi|195619662|gb|ACG31661.1| 40S ribosomal
protein S28 [Zea mays] gi|195620148|gb|ACG31904.1| 40S
ribosomal protein S28 [Zea mays]
gi|195655603|gb|ACG47269.1| 40S ribosomal protein S28
[Zea mays] gi|195655989|gb|ACG47462.1| 40S ribosomal
protein S28 [Zea mays] gi|222612816|gb|EEE50948.1|
hypothetical protein OsJ_31495 [Oryza sativa Japonica
Group] gi|241922302|gb|EER95446.1| hypothetical protein
SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|255674234|dbj|BAF10993.2| Os03g0167100 [Oryza sativa
Japonica Group] gi|326509929|dbj|BAJ87180.1| predicted
protein [Hordeum vulgare subsp. vulgare]
gi|326526071|dbj|BAJ93212.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|413956006|gb|AFW88655.1| 40S
ribosomal protein S28 isoform 1 [Zea mays]
gi|413956007|gb|AFW88656.1| 40S ribosomal protein S28
isoform 2 [Zea mays] gi|414865013|tpg|DAA43570.1| TPA:
40S ribosomal protein S28 [Zea mays]
gi|414866364|tpg|DAA44921.1| TPA: 40S ribosomal protein
S28 isoform 1 [Zea mays] gi|414866365|tpg|DAA44922.1|
TPA: 40S ribosomal protein S28 isoform 2 [Zea mays]
gi|414866366|tpg|DAA44923.1| TPA: 40S ribosomal protein
S28 isoform 3 [Zea mays] gi|414866367|tpg|DAA44924.1|
TPA: 40S ribosomal protein S28 isoform 4 [Zea mays]
gi|474386341|gb|EMS64988.1| 40S ribosomal protein S28
[Triticum urartu] gi|475553296|gb|EMT11959.1| 40S
ribosomal protein S28 [Aegilops tauschii]
Length = 65
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 53
>gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticum aestivum]
Length = 86
Score = 100 bits (250), Expect = 3e-19
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 22 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 74
>ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831577 [Brachypodium
distachyon]
Length = 554
Score = 100 bits (249), Expect = 3e-19
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDILT
Sbjct: 490 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDILT 542
>ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
Length = 115
Score = 100 bits (249), Expect = 3e-19
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDILT
Sbjct: 51 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDILT 103
>ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
Length = 65
Score = 100 bits (249), Expect = 3e-19
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDILT
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDILT 53
>emb|CBI29957.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 100 bits (248), Expect = 4e-19
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = +2
Query: 98 RMDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
+M+SGVK AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 46 KMESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 99
>ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
gi|557532022|gb|ESR43205.1| hypothetical protein
CICLE_v10013157mg [Citrus clementina]
Length = 114
Score = 99.4 bits (246), Expect = 7e-19
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = +2
Query: 98 RMDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
RMDS +K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 49 RMDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 102
>gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus persica]
Length = 124
Score = 99.4 bits (246), Expect = 7e-19
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = +2
Query: 98 RMDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
RMDS +K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 59 RMDSTIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 112
>ref|XP_002281530.1| PREDICTED: 40S ribosomal protein S28-like [Vitis vinifera]
Length = 65
Score = 99.4 bits (246), Expect = 7e-19
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
M+SGVK AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 1 MESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 155
Score = 98.6 bits (244), Expect = 1e-18
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +2
Query: 95 SRMDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
+RM+S VK AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 89 TRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 143
>ref|XP_001758744.1| predicted protein [Physcomitrella patens]
gi|168059761|ref|XP_001781869.1| predicted protein
[Physcomitrella patens] gi|162666676|gb|EDQ53324.1|
predicted protein [Physcomitrella patens]
gi|162689881|gb|EDQ76250.1| predicted protein
[Physcomitrella patens]
Length = 65
Score = 98.6 bits (244), Expect = 1e-18
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +2
Query: 101 MDSGVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 259
MD+ VKLA+V+KV+GRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT
Sbjct: 1 MDTAVKLAIVMKVIGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDILT 53