BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00004018
         (914 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27055.3| unnamed protein product [Vitis vinifera]              239   1e-60
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...   239   1e-60
ref|XP_006843755.1| hypothetical protein AMTR_s00007p00235560 [A...   238   3e-60
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   233   6e-59
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra...   233   1e-58
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra...   231   3e-58
ref|NP_173925.3| mediator of RNA polymerase II transcription sub...   231   3e-58
gb|EOY02123.1| Phytochrome and flowering time regulatory protein...   230   6e-58
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra...   229   8e-58
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...   229   8e-58
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...   229   1e-57
gb|EOY02124.1| Phytochrome and flowering time regulatory protein...   229   1e-57
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   227   4e-57
gb|ABM81545.1| phytochrome and flowering time protein 1 [Triticu...   222   1e-55
ref|XP_002890684.1| hypothetical protein ARALYDRAFT_472815 [Arab...   222   2e-55
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra...   221   3e-55
ref|XP_004956526.1| PREDICTED: mediator of RNA polymerase II tra...   221   4e-55
ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843...   221   4e-55
ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Caps...   219   1e-54
dbj|BAD36509.1| putative SMA-9 class B [Oryza sativa Japonica Gr...   219   1e-54

>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  239 bits (610), Expect = 1e-60
 Identities = 128/268 (47%), Positives = 174/268 (64%), Gaps = 6/268 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           E+QLVV +EGTAA+GPYW  +   Y+DKI+R F GN+ + QK   +N EL+LV+F++HG 
Sbjct: 3   EKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQI--- 457
           + +CLVQRSGWT ++D F +WL ++ F                   M S    GSQ    
Sbjct: 63  YCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQQN 122

Query: 458 --SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              Q+HC+LVA +NPYPLPTPV +P ++ + +QN + ESQT   L+D E VAK++AQ  V
Sbjct: 123 VDGQRHCILVAANNPYPLPTPVYQP-QMQNMEQNESIESQTESRLSDAEAVAKSFAQCSV 181

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSVI PK LP  KSIYNA K+N    DP +DN+KN   LVLIS++F EA +ALS PG S
Sbjct: 182 SLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGLS 241

Query: 812 S-NANQSMIKPEMSAPIPAVPTQQPSAI 892
           +  ANQS +K ++ A +P V    P++I
Sbjct: 242 NMTANQSPVKMDI-ASVPQVSAAPPASI 268


>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score =  239 bits (610), Expect = 1e-60
 Identities = 128/268 (47%), Positives = 174/268 (64%), Gaps = 6/268 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           E+QLVV +EGTAA+GPYW  +   Y+DKI+R F GN+ + QK   +N EL+LV+F++HG 
Sbjct: 3   EKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQI--- 457
           + +CLVQRSGWT ++D F +WL ++ F                   M S    GSQ    
Sbjct: 63  YCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQQN 122

Query: 458 --SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              Q+HC+LVA +NPYPLPTPV +P ++ + +QN + ESQT   L+D E VAK++AQ  V
Sbjct: 123 VDGQRHCILVAANNPYPLPTPVYQP-QMQNMEQNESIESQTESRLSDAEAVAKSFAQCSV 181

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSVI PK LP  KSIYNA K+N    DP +DN+KN   LVLIS++F EA +ALS PG S
Sbjct: 182 SLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGLS 241

Query: 812 S-NANQSMIKPEMSAPIPAVPTQQPSAI 892
           +  ANQS +K ++ A +P V    P++I
Sbjct: 242 NMTANQSPVKMDI-ASVPQVSAAPPASI 268


>ref|XP_006843755.1| hypothetical protein AMTR_s00007p00235560 [Amborella trichopoda]
           gi|548846123|gb|ERN05430.1| hypothetical protein
           AMTR_s00007p00235560 [Amborella trichopoda]
          Length = 717

 Score =  238 bits (606), Expect = 3e-60
 Identities = 126/266 (47%), Positives = 174/266 (65%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           E+QLVV++EGTAA+GP+W  I+   ++KI+R FYG+D S QK PGAN E AL++F SHGP
Sbjct: 3   EKQLVVIVEGTAAMGPFWPSIQSEILEKIIRVFYGSDLSGQKLPGANVEFALIMFYSHGP 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQISQK 466
           +S CL+QRSGWT NLD F +WL SI+F                    + SN   S    K
Sbjct: 63  YSDCLLQRSGWTRNLDLFLRWLSSISF-SGGGFGEAAIGEGLSEALWICSNMTQSLEGHK 121

Query: 467 HCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMVTLSVI 646
           HC+LVA SNP+ LPTPVP+  +  S  QNG+++ Q   +LAD ETVAKA++Q  V+LSVI
Sbjct: 122 HCILVAASNPHALPTPVPQLPK--SLDQNGSSDGQKEIYLADAETVAKAFSQYSVSLSVI 179

Query: 647 APKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTSSNANQ 826
           +PK+LP  ++IYNAAK+N    DP IDN K   +L+L+S+ F EA +AL    T+  A+Q
Sbjct: 180 SPKNLPKLRAIYNAAKRNSRVPDPAIDNTKYPHYLILLSDLFVEARAALRPGITNLPASQ 239

Query: 827 SMIKPEMSAPIPAVPTQQPSAIAKTA 904
           + +K + S+ +P+  +  P A   +A
Sbjct: 240 NQMKFD-SSSVPSTVSGPPPATMPSA 264


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
           gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
           hypothetical protein CICLE_v10030710mg [Citrus
           clementina]
          Length = 830

 Score =  233 bits (595), Expect = 6e-59
 Identities = 127/268 (47%), Positives = 170/268 (63%), Gaps = 6/268 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           E+QL+V +EGTAA+GPYW  I   Y++KI+R F  N+ + QK   +N EL+LV F++HG 
Sbjct: 3   EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQ---- 454
           + ACLVQRSGWT ++D F  WL +I F                   M S    GSQ    
Sbjct: 63  YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQN 122

Query: 455 -ISQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              Q+HC+LVA SNP+PLPTPV RP ++ +  QN N E+Q    L+D ETVAK++ Q  V
Sbjct: 123 VDGQRHCILVAASNPHPLPTPVYRP-QMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 181

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSVI PK LP   +IYNAAK+N  + DP +DN KN   LVLISENF EA +ALS PG +
Sbjct: 182 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 241

Query: 812 SNA-NQSMIKPEMSAPIPAVPTQQPSAI 892
           + A NQ+ +K ++ AP+ +V    P++I
Sbjct: 242 NLAPNQNPVKMDI-APVTSVTGPAPTSI 268


>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Solanum lycopersicum]
          Length = 805

 Score =  233 bits (593), Expect = 1e-58
 Identities = 124/266 (46%), Positives = 169/266 (63%), Gaps = 5/266 (1%)
 Frame = +2

Query: 104 MERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHG 283
           M  +L+V +EGTA LGPYW  I   Y+DKI+R F+G DS++QK   A+ E+++V+F++HG
Sbjct: 1   MVDKLIVAVEGTAVLGPYWKIIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSMVMFNTHG 60

Query: 284 PHSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLS---SNQVGSQ 454
           P+SACLVQRSGWT ++D F +WL +I F                   M S    NQ   +
Sbjct: 61  PYSACLVQRSGWTKDMDTFLQWLSAIPFSGGGFNDAAVAEGLAEALVMFSVPNGNQTQQK 120

Query: 455 I-SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
           +  +KHC+L++ SNPYPLPTPV RP ++   +QN N E+QT   LAD ETVAK + Q  +
Sbjct: 121 MEGKKHCILISGSNPYPLPTPVYRP-QMQKLEQNENIEAQTDSRLADAETVAKTFPQCSI 179

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPG-T 808
           +LSVI PK LP  ++IY+A K N  + DP ID  KN   LVLISENF EA +A S  G T
Sbjct: 180 SLSVICPKKLPKLRAIYDAGKHNPRAADPPIDTAKNPNFLVLISENFIEARAAFSRSGLT 239

Query: 809 SSNANQSMIKPEMSAPIPAVPTQQPS 886
           +  +N S +K ++S+ +P   TQ  S
Sbjct: 240 NLASNHSPVKMDVSSVLPVSGTQSIS 265


>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Solanum tuberosum]
          Length = 819

 Score =  231 bits (589), Expect = 3e-58
 Identities = 124/266 (46%), Positives = 170/266 (63%), Gaps = 5/266 (1%)
 Frame = +2

Query: 104 MERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHG 283
           M  +L+V +EGTAALGPYW  I   Y+DKI+R F+G DS++QK   A+ E++LV+F++HG
Sbjct: 1   MVDKLIVAVEGTAALGPYWKTIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSLVMFNTHG 60

Query: 284 PHSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXM---LSSNQVGSQ 454
            +SACLVQRSGWT ++D F +WL +I F                   M   L+ NQ    
Sbjct: 61  SYSACLVQRSGWTRDMDTFLQWLSAIPFLGGGFNDAAVAEGLAEALVMFSGLNGNQSQQN 120

Query: 455 I-SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
           +  +KHC+L++ SNPYPLPTPV RP ++   +QN N E+QT   L+D ETVAKA+ Q  +
Sbjct: 121 MEGKKHCILISGSNPYPLPTPVYRP-QMQKLEQNENIEAQTDSRLSDAETVAKAFPQCSI 179

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPG-T 808
           +LSV+ PK LP  ++IY+A K N  + DP ID  KN   LVLISENF EA +A S  G T
Sbjct: 180 SLSVLCPKKLPKLRAIYDAGKHNPRAADPPIDTAKNPNFLVLISENFIEARAAFSRSGMT 239

Query: 809 SSNANQSMIKPEMSAPIPAVPTQQPS 886
           +  +N S +K ++S+ +P   TQ  S
Sbjct: 240 NLASNHSPVKMDVSSVLPVSGTQSIS 265


>ref|NP_173925.3| mediator of RNA polymerase II transcription subunit 25 [Arabidopsis
           thaliana] gi|75145501|sp|Q7XYY2.1|MED25_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           25; Short=AtMED25; AltName: Full=Phytochrome and
           flowering time 1 protein; AltName: Full=Phytochrome and
           flowering time regulatory protein 1
           gi|32478899|gb|AAO39425.1| phytochrome and flowering
           time 1 protein [Arabidopsis thaliana]
           gi|332192518|gb|AEE30639.1| mediator of RNA polymerase
           II transcription subunit 25 [Arabidopsis thaliana]
          Length = 836

 Score =  231 bits (589), Expect = 3e-58
 Identities = 124/271 (45%), Positives = 170/271 (62%), Gaps = 4/271 (1%)
 Frame = +2

Query: 110 RQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGPH 289
           +QL+VV EGTAALGPYW  I   Y++KI+R+F G++ + ++ P +  EL+LV+F+SHG +
Sbjct: 6   KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSY 65

Query: 290 SACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS--- 460
            ACLVQRSGWT ++D F  WL SI F                   M S     +Q S   
Sbjct: 66  CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSGQAQPSNDL 125

Query: 461 QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMVTLS 640
           ++HC+L+  SNP+ LPTPV RP RL + ++N N ++Q    L+D ETVA  +A+  V+LS
Sbjct: 126 KRHCILITASNPHILPTPVYRP-RLQNVERNENGDAQAESRLSDAETVASYFAKCSVSLS 184

Query: 641 VIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTSSNA 820
           V+ PK LPT +++YNA K NQ S D  ID  KNT +LVLISENF EAC+ALS   T+   
Sbjct: 185 VVCPKQLPTIRALYNAGKPNQQSADLSIDTAKNTFYLVLISENFVEACAALSHSATNLPQ 244

Query: 821 NQSMIKPEMSAPIPAVP-TQQPSAIAKTAAG 910
            QS +K + +   P++P T QP A   +A G
Sbjct: 245 TQSPVKVDRATVAPSIPVTGQPPAPVSSANG 275


>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
           [Theobroma cacao]
          Length = 871

 Score =  230 bits (586), Expect = 6e-58
 Identities = 126/269 (46%), Positives = 167/269 (62%), Gaps = 9/269 (3%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ERQL+V +EGTAA+GPYW  +   Y+DKI+R F  ++ + QK   +N ELALV F++HG 
Sbjct: 3   ERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQI--- 457
           + ACLVQRSGWT ++D F +WL +I F                   M      G+Q    
Sbjct: 63  YCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQQN 122

Query: 458 --SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              Q+HC+LVA SNPYPLPTPV RP ++ + +Q  N E+QT   L+D ETVAK++AQ  V
Sbjct: 123 VDGQRHCILVAASNPYPLPTPVYRP-QIQNLEQTENIEAQTESRLSDAETVAKSFAQCSV 181

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSVI PK L   K+IY+A K+N  + DP +DN++N   LVLISENF E  +ALS PG  
Sbjct: 182 SLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGVP 241

Query: 812 SNA-NQSMIKPEMSAPIPAV---PTQQPS 886
           S A NQS +K +M++        PT  PS
Sbjct: 242 SLASNQSPVKMDMASVTSGTGPPPTSVPS 270


>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like, partial [Cucumis sativus]
          Length = 595

 Score =  229 bits (585), Expect = 8e-58
 Identities = 126/269 (46%), Positives = 169/269 (62%), Gaps = 9/269 (3%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ++QL+VV+EGTAA+GP+W  +   YI+KIVR+F GN+ + QK P +N E +LV F +HG 
Sbjct: 3   DKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS-- 460
           +  CLVQR+GWT ++D F +WL +I F                   M  +   G Q    
Sbjct: 63  YCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQQT 122

Query: 461 ---QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              QKHC+LVA SNPYPLPTPV RP  + + +Q+ N E  + Q  A  ETVAK++ Q  +
Sbjct: 123 MDMQKHCILVAASNPYPLPTPVYRP-AVQNLEQHDNVEPGSSQSYA--ETVAKSFPQCFI 179

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPG-T 808
           +LSVI PK LP  K+IY A K+N  + DP IDN+K+  +LVLISENF EA +ALS PG T
Sbjct: 180 SLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGIT 239

Query: 809 SSNANQSMIKPEMSAPIPAV---PTQQPS 886
           S  ANQS +K ++S+ +P     PT  PS
Sbjct: 240 SLPANQSPVKMDISSVVPVTGPPPTTTPS 268


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Cucumis sativus]
          Length = 858

 Score =  229 bits (585), Expect = 8e-58
 Identities = 126/269 (46%), Positives = 169/269 (62%), Gaps = 9/269 (3%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ++QL+VV+EGTAA+GP+W  +   YI+KIVR+F GN+ + QK P +N E +LV F +HG 
Sbjct: 3   DKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS-- 460
           +  CLVQR+GWT ++D F +WL +I F                   M  +   G Q    
Sbjct: 63  YCGCLVQRTGWTRDVDIFIQWLSAIPFSGGGFSDAAIAEGLAEALMMFPTQPNGGQNQQT 122

Query: 461 ---QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              QKHC+LVA SNPYPLPTPV RP  + + +Q+ N E  + Q  A  ETVAK++ Q  +
Sbjct: 123 MDMQKHCILVAASNPYPLPTPVYRP-AVQNLEQHDNVEPGSSQSYA--ETVAKSFPQCFI 179

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPG-T 808
           +LSVI PK LP  K+IY A K+N  + DP IDN+K+  +LVLISENF EA +ALS PG T
Sbjct: 180 SLSVICPKQLPKLKAIYTAGKRNPRAADPPIDNVKSPSYLVLISENFVEARAALSRPGIT 239

Query: 809 SSNANQSMIKPEMSAPIPAV---PTQQPS 886
           S  ANQS +K ++S+ +P     PT  PS
Sbjct: 240 SLPANQSPVKMDISSVVPVTGPPPTTTPS 268


>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
           gi|550332870|gb|EEE88812.2| hypothetical protein
           POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score =  229 bits (583), Expect = 1e-57
 Identities = 120/265 (45%), Positives = 170/265 (64%), Gaps = 12/265 (4%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ++QL+V +EGTAA+GP+W  I   Y++KI+R + GN++S QK P ++ EL+LV F+SHG 
Sbjct: 3   DKQLIVAVEGTAAMGPFWSIIVSDYLEKIIRCYCGNETSGQKPPTSSAELSLVTFNSHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQI--- 457
           +SACLVQRSGWT ++D F  WL +I F                   M      G+Q    
Sbjct: 63  YSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPITPNGNQTQPN 122

Query: 458 --SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              Q++C+L+A SNP+PLPTPV RP ++ + +Q  N ++Q    L+D ETVAK++ Q  V
Sbjct: 123 TDGQRNCILIAASNPHPLPTPVYRP-QIQNLEQTENIDAQNESRLSDAETVAKSFPQCSV 181

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPG-T 808
           +LSVI PK LP  + IYNA K+N  + DP +DN+KN   LVLISENF EA +ALS PG T
Sbjct: 182 SLSVICPKQLPKLRLIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGAT 241

Query: 809 SSNANQSMIKPEMSA------PIPA 865
           S  +NQ+ +K ++++      P+PA
Sbjct: 242 SLPSNQTPVKVDIASVTSVTGPLPA 266


>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
           [Theobroma cacao]
          Length = 860

 Score =  229 bits (583), Expect = 1e-57
 Identities = 122/255 (47%), Positives = 163/255 (63%), Gaps = 6/255 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ERQL+V +EGTAA+GPYW  +   Y+DKI+R F  ++ + QK   +N ELALV F++HG 
Sbjct: 3   ERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQI--- 457
           + ACLVQRSGWT ++D F +WL +I F                   M      G+Q    
Sbjct: 63  YCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQQN 122

Query: 458 --SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              Q+HC+LVA SNPYPLPTPV RP ++ + +Q  N E+QT   L+D ETVAK++AQ  V
Sbjct: 123 VDGQRHCILVAASNPYPLPTPVYRP-QIQNLEQTENIEAQTESRLSDAETVAKSFAQCSV 181

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSVI PK L   K+IY+A K+N  + DP +DN++N   LVLISENF E  +ALS PG  
Sbjct: 182 SLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGVP 241

Query: 812 SNA-NQSMIKPEMSA 853
           S A NQS +K +M++
Sbjct: 242 SLASNQSPVKMDMAS 256


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  227 bits (579), Expect = 4e-57
 Identities = 126/268 (47%), Positives = 169/268 (63%), Gaps = 6/268 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           E+QL+V +EGTAA+GPYW  I   Y++KI+R F  N+ + Q    +N EL+LV F++HG 
Sbjct: 3   EKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQTS-ASNVELSLVTFNTHGS 61

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQISQ- 463
           + ACLVQRSGWT ++D F  WL +I F                   M S    GSQ  Q 
Sbjct: 62  YCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQQN 121

Query: 464 ----KHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
               +HC+LVA SNP+PLPTPV RP ++ +  QN N E+Q    L+D ETVAK++ Q  V
Sbjct: 122 VDGQRHCILVAASNPHPLPTPVYRP-QMQNLDQNENNEAQAESRLSDAETVAKSFVQCSV 180

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSVI PK LP   +IYNAAK+N  + DP +DN KN   LVLISENF EA +ALS PG +
Sbjct: 181 SLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFMEARAALSRPGVA 240

Query: 812 SNA-NQSMIKPEMSAPIPAVPTQQPSAI 892
           + A NQ+ +K ++ AP+ +V    P++I
Sbjct: 241 NLAPNQNPVKMDI-APVTSVTGPAPTSI 267


>gb|ABM81545.1| phytochrome and flowering time protein 1 [Triticum aestivum]
          Length = 759

 Score =  222 bits (566), Expect = 1e-55
 Identities = 125/277 (45%), Positives = 164/277 (59%), Gaps = 8/277 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ERQLVVV+EGTAALGPYW  I   Y++KIVR+F   + S QK  G   ELALVVF +HGP
Sbjct: 8   ERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHGP 67

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS-- 460
           +SA +VQRSGWT ++D F  WL  I+F                   +L  +   SQ    
Sbjct: 68  YSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSSSSSQNHQN 127

Query: 461 ---QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              QKHC+LVA SNPYPLPTPV RP   +S  +  N E+     LAD E VA ++AQ  V
Sbjct: 128 RELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSN-EATKESCLADAEAVAVSFAQCSV 186

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSP--- 802
           +LSV++PK LPT K+IYNA K+N  ++DP +D+ KN   LVL+SE+F EA +ALS P   
Sbjct: 187 SLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHAKNPHFLVLLSESFMEARTALSHPLPG 246

Query: 803 GTSSNANQSMIKPEMSAPIPAVPTQQPSAIAKTAAGQ 913
               N   + +    +A +P  P+    ++  T  G+
Sbjct: 247 NLVPNHTITKMDTTPAATVPGPPSNASPSVNGTMMGR 283


>ref|XP_002890684.1| hypothetical protein ARALYDRAFT_472815 [Arabidopsis lyrata subsp.
           lyrata] gi|297336526|gb|EFH66943.1| hypothetical protein
           ARALYDRAFT_472815 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  222 bits (565), Expect = 2e-55
 Identities = 122/271 (45%), Positives = 167/271 (61%), Gaps = 4/271 (1%)
 Frame = +2

Query: 110 RQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGPH 289
           +QL+VV EGTAALGPYW  I   Y++KI+R+F G++ + ++ P +  EL+LV+F+SHG +
Sbjct: 6   KQLIVVAEGTAALGPYWQTIVSDYLEKIIRSFCGSELNGERNPVSTVELSLVIFNSHGSY 65

Query: 290 SACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS--- 460
            ACLVQRSGWT ++D F  WL SI F                   M S     +Q S   
Sbjct: 66  CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFSPPSGQAQPSNDL 125

Query: 461 QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMVTLS 640
           ++HC+L+  SNP+ LPTPV RP RL S ++N N ++Q    L+D ETVA  +A+  V+LS
Sbjct: 126 KRHCILITASNPHTLPTPVFRP-RLQSVERNENGDAQAESRLSDAETVASYFAKCSVSLS 184

Query: 641 VIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTSSNA 820
           V+ PK LP  +++YNA K N  S D  ID  KNT +LVLISENF EA +ALS   T+   
Sbjct: 185 VVCPKQLPKIRALYNAGKLNPQSADLSIDTAKNTFYLVLISENFVEARAALSHSATNLPQ 244

Query: 821 NQSMIKPEMSAPIPAVP-TQQPSAIAKTAAG 910
            QS +K + +   P++P T QP A   +A G
Sbjct: 245 TQSPVKVDRATVAPSLPVTGQPPAPVTSANG 275


>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Fragaria vesca subsp. vesca]
          Length = 855

 Score =  221 bits (563), Expect = 3e-55
 Identities = 120/270 (44%), Positives = 169/270 (62%), Gaps = 10/270 (3%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           E+QL+VV+EGTAA+GPYW  +   Y++K++R+  GN+ S QK   +  E++LV F++HG 
Sbjct: 3   EKQLIVVVEGTAAMGPYWPAVVSDYVEKVIRSLSGNELSGQKPSSSTVEMSLVTFNTHGS 62

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS-- 460
           +S CLVQR+GWT +++ F +WL +I                     M  + Q G Q    
Sbjct: 63  YSGCLVQRTGWTRDIELFLQWLSAIPLAGGGFSDAAIAEGLSEALMMFPTIQNGGQNQQN 122

Query: 461 ---QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              QKHC+LVA SNP+PLPTPV RP ++ + +Q+ N ++QT   L D E VAK++ Q  V
Sbjct: 123 VDFQKHCILVAASNPHPLPTPVYRP-QMQNVEQSENFDAQTESRLYDAEAVAKSFPQCSV 181

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPG-T 808
           +LSVI PK LP  ++IYNA K+N  + DP IDN+KN   LVLISENF EA + LS PG T
Sbjct: 182 SLSVICPKQLPKLRAIYNAGKRNPRAEDPPIDNVKNPHFLVLISENFIEARATLSRPGST 241

Query: 809 SSNANQSMIKPEMSAPIPAV----PTQQPS 886
           +  +  S +K ++ AP+ +V    PT  PS
Sbjct: 242 TLPSIPSPVKMDI-APVASVTGPPPTSMPS 270


>ref|XP_004956526.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Setaria italica]
          Length = 773

 Score =  221 bits (562), Expect = 4e-55
 Identities = 130/269 (48%), Positives = 163/269 (60%), Gaps = 6/269 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ERQLVV +EGTAALGPYW  I   Y++KIVR+F  N+   QK  GA  ELALVVF +HGP
Sbjct: 7   ERQLVVAVEGTAALGPYWSTIVGDYVEKIVRSFCANEVPGQKLAGAPPELALVVFHTHGP 66

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQI--- 457
           +SA  VQRSGWT ++D+F  WL  I F                   +L      +Q    
Sbjct: 67  YSAFGVQRSGWTKDIDSFLSWLSGIPFSGGGFSEASTCEGLAEALMILQGTPNTTQSHPN 126

Query: 458 --SQKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
             +QKHCVLVA SNPYPLPTPV       ST    N ES     +AD ETVAK++AQ  V
Sbjct: 127 HEAQKHCVLVAASNPYPLPTPV-YCLPTQSTDHKENTESSKEPSIADAETVAKSFAQCSV 185

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSVI+PK LPT K+IYNA K+N  + DP +D+ KN   LVL+SENF EA +ALS P   
Sbjct: 186 SLSVISPKQLPTLKAIYNAGKRNPRAADPSVDHAKNPHFLVLLSENFMEARTALSRPLHG 245

Query: 812 SNA-NQSMIKPEMSAPIPAVPTQQPSAIA 895
           + A NQ++ K + +   P+V    P++ A
Sbjct: 246 NLAPNQTVTKMDTT---PSVTMAGPTSNA 271


>ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843505 [Brachypodium
           distachyon]
          Length = 771

 Score =  221 bits (562), Expect = 4e-55
 Identities = 123/260 (47%), Positives = 155/260 (59%), Gaps = 5/260 (1%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ERQLVVV+EGTAALGPYW  I   Y++KIVR+F     S QK  G   ELALVVF +HGP
Sbjct: 8   ERQLVVVVEGTAALGPYWHTIAAEYVEKIVRSFCAAQLSGQKLAGVPPELALVVFHTHGP 67

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS-- 460
           +SA +VQRSGWT ++D F  WL  I+F                   +L  +   +Q    
Sbjct: 68  YSAFVVQRSGWTKDMDTFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPSNNQNHQN 127

Query: 461 ---QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              QKHCVLVA SNPYPLPTPV RP  + S     N E      LAD E VA +++Q  V
Sbjct: 128 HELQKHCVLVAASNPYPLPTPVYRPF-VQSGDHKKNNEVTKESCLADAEAVAISFSQCCV 186

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSV++PK LPT K+IYNA K+N  ++DP +D++KN   LVL+SE+F EA +ALS P   
Sbjct: 187 SLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHVKNPHFLVLLSESFMEARTALSHPSPG 246

Query: 812 SNANQSMIKPEMSAPIPAVP 871
           +     +I     AP   VP
Sbjct: 247 NLVPNQIITKMDIAPAATVP 266


>ref|XP_006306776.1| hypothetical protein CARUB_v10008315mg [Capsella rubella]
           gi|482575487|gb|EOA39674.1| hypothetical protein
           CARUB_v10008315mg [Capsella rubella]
          Length = 827

 Score =  219 bits (558), Expect = 1e-54
 Identities = 120/271 (44%), Positives = 165/271 (60%), Gaps = 4/271 (1%)
 Frame = +2

Query: 110 RQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGPH 289
           +QL+VV EGTAALGPYW  I   Y+DKI+R+F G + + ++ P +  EL+LV+F+SHG +
Sbjct: 7   KQLIVVAEGTAALGPYWQTIVSDYLDKIIRSFCGTELNGERNPVSTVELSLVIFNSHGSY 66

Query: 290 SACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXML---SSNQVGSQIS 460
            ACLVQRSGWT ++D F  WL SI F                   M    S     S   
Sbjct: 67  CACLVQRSGWTRDVDIFLHWLSSIQFGGGGFNEVATAEGLAEALMMFPPPSGQAQPSSDL 126

Query: 461 QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMVTLS 640
           ++HC+L+  SNP+ LPTPV RP RL + ++N N ++Q+   L+D ETVA  +A+  V+LS
Sbjct: 127 KRHCILITASNPHTLPTPVYRP-RLQNVERNENGDTQSESRLSDAETVASYFAKCSVSLS 185

Query: 641 VIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTSSNA 820
           V+ PK LP  +++YNA K N  S D  ID +KN  +LVLISENF EA +ALS   T+   
Sbjct: 186 VVCPKQLPKIRALYNAGKLNPQSVDLSIDTVKNPFYLVLISENFVEARAALSHSATNLPQ 245

Query: 821 NQSMIKPEMSAPIPAVP-TQQPSAIAKTAAG 910
            QS +K + +   P++P T QP A   +A G
Sbjct: 246 TQSPVKMDRATVAPSLPVTGQPPAPVTSANG 276


>dbj|BAD36509.1| putative SMA-9 class B [Oryza sativa Japonica Group]
           gi|215769266|dbj|BAH01495.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 842

 Score =  219 bits (558), Expect = 1e-54
 Identities = 123/262 (46%), Positives = 159/262 (60%), Gaps = 6/262 (2%)
 Frame = +2

Query: 107 ERQLVVVIEGTAALGPYWIDIRDHYIDKIVRAFYGNDSSNQKQPGANGELALVVFSSHGP 286
           ERQLVV +EGTAALGPYW      Y++KIVR+F  ++ + QK  G   ELALVVF +HGP
Sbjct: 7   ERQLVVAVEGTAALGPYWPVTVADYVEKIVRSFCAHEMAGQKLAGTPPELALVVFHTHGP 66

Query: 287 HSACLVQRSGWTSNLDNFFKWLQSINFCXXXXXXXXXXXXXXXXXXMLSSNQVGSQIS-- 460
           +SA  VQRSGWT +++ F  WL  I+F                   +L  +   SQ    
Sbjct: 67  YSAFCVQRSGWTKDMNVFLSWLSGISFSGGGFSEAAISEGLAEALMILQGSSSNSQNHQS 126

Query: 461 ---QKHCVLVATSNPYPLPTPVPRPHRLNSTQQNGNAESQTPQWLADTETVAKAYAQLMV 631
              QKHC+LVA SNPYPLPTPV RP  + S+    N +      LAD ETVAK++AQ  V
Sbjct: 127 HEVQKHCILVAASNPYPLPTPVYRP-LVQSSDHKENNDGAKESCLADAETVAKSFAQCSV 185

Query: 632 TLSVIAPKDLPTFKSIYNAAKQNQTSTDPVIDNMKNTQHLVLISENFTEACSALSSPGTS 811
           +LSV++PK LPT K+IYNAAK+N  + DP +D+ KN   LVL+S+NF EA +ALS P   
Sbjct: 186 SLSVVSPKQLPTLKAIYNAAKRNPRAADPSVDHAKNPHFLVLLSDNFLEARTALSRPLPG 245

Query: 812 S-NANQSMIKPEMSAPIPAVPT 874
           +   N  + K + +A    VPT
Sbjct: 246 NLVTNHPITKMDTAATSVPVPT 267