BLASTX nr result
ID: Ephedra26_contig00003901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00003901
(633 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_689386.1| cytochrome c oxidase subunit 1 [Chaetosphaeridi... 72 1e-10
gb|AEA29869.1| cytochrome c oxidase subunit 1 (mitochondrion) [S... 72 1e-10
gb|AEA11197.1| cytochrome oxidase subunit 1, partial (mitochondr... 72 1e-10
ref|NP_054454.1| cytochrome c oxidase subunit 1 [Marchantia poly... 72 2e-10
ref|NP_943703.1| cytochrome c oxidase subunit 1 [Chara vulgaris]... 72 2e-10
gb|AAC09453.1| coxI intron4 ORF [Marchantia polymorpha] 72 2e-10
gb|AAC09452.1| coxI intron8 ORF [Marchantia polymorpha] 72 2e-10
ref|YP_006073039.1| cox1 gene product (mitochondrion) [Nitella h... 72 2e-10
ref|YP_004927603.1| cytochrome c oxidase subunit 1 (mitochondrio... 72 2e-10
gb|AEB40011.1| cytochrome c oxidase subunit 1 [Funaria hygrometr... 72 2e-10
ref|YP_003276009.1| cytochrome c oxidase subunit 1 (mitochondrio... 72 2e-10
ref|YP_539000.2| cytochrome c oxidase subunit 1 [Physcomitrella ... 72 2e-10
gb|AAZ29195.1| cytochrome c oxidase subunit I [Pellia epiphylla] 72 2e-10
ref|YP_008816172.1| cytochrome c oxidase subunit 1 (mitochondrio... 71 3e-10
ref|YP_008816006.1| cytochrome c oxidase subunit 1 (mitochondrio... 71 3e-10
gb|ABN50271.1| cytochrome oxidase subunit I [Larix gmelinii var.... 71 3e-10
ref|YP_008816096.1| cytochrome c oxidase subunit 1 (mitochondrio... 70 4e-10
dbj|BAJ21558.1| cytochrome c oxidase subunit 1 [Pterosperma cris... 70 4e-10
gb|ABN50288.1| cytochrome oxidase subunit I [Ephedra triandra] 70 5e-10
emb|CBJ20678.1| hypothetical protein [Beta vulgaris subsp. marit... 70 7e-10
>ref|NP_689386.1| cytochrome c oxidase subunit 1 [Chaetosphaeridium globosum]
gi|22417002|gb|AAM96601.1|AF494279_6 cytochrome c
oxidase subunit 1 [Chaetosphaeridium globosum]
Length = 526
Score = 72.0 bits (175), Expect = 1e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 IGTCFSILIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPALI 79
>gb|AEA29869.1| cytochrome c oxidase subunit 1 (mitochondrion) [Selaginella
moellendorffii]
Length = 536
Score = 72.0 bits (175), Expect = 1e-10
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTCLS + LAQ GNQLLG +HQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 LGTCLSVLIRMELAQPGNQLLGGHHQLYNVLITAHAFLMIFFMVMPAMI 79
>gb|AEA11197.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Selaginella
moellendorffii]
Length = 450
Score = 72.0 bits (175), Expect = 1e-10
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTCLS + LAQ GNQLLG +HQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 LGTCLSVLIRMELAQPGNQLLGGHHQLYNVLITAHAFLMIFFMVMPAMI 79
>ref|NP_054454.1| cytochrome c oxidase subunit 1 [Marchantia polymorpha]
gi|461785|sp|P26856.2|COX1_MARPO RecName:
Full=Cytochrome c oxidase subunit 1; AltName:
Full=Cytochrome c oxidase polypeptide I
gi|786237|gb|AAC09451.1| coxI [Marchantia polymorpha]
Length = 522
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>ref|NP_943703.1| cytochrome c oxidase subunit 1 [Chara vulgaris]
gi|32966590|gb|AAP92173.1| cytochrome c oxidase subunit
1 [Chara vulgaris]
Length = 524
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPALI 79
>gb|AAC09453.1| coxI intron4 ORF [Marchantia polymorpha]
Length = 434
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>gb|AAC09452.1| coxI intron8 ORF [Marchantia polymorpha]
Length = 636
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>ref|YP_006073039.1| cox1 gene product (mitochondrion) [Nitella hyalina]
gi|335354166|gb|AEH42853.1| cytochrome c oxidase subunit
1 (mitochondrion) [Nitella hyalina]
Length = 522
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPALI 79
>ref|YP_004927603.1| cytochrome c oxidase subunit 1 (mitochondrion) [Anomodon rugelii]
gi|529249679|ref|YP_008378673.1| cytochrome c oxidase
subunit 1 (mitochondrion) [Anomodon attenuatus]
gi|336089460|gb|AEH99650.1| cytochrome c oxidase subunit
1 [Anomodon rugelii] gi|402746412|gb|AFQ93997.1|
cytochrome c oxidase subunit 1 (mitochondrion) [Anomodon
attenuatus]
Length = 522
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>gb|AEB40011.1| cytochrome c oxidase subunit 1 [Funaria hygrometrica]
gi|328905406|gb|AEB54951.1| cytochrome oxidase subunit 1
[Funaria hygrometrica]
Length = 523
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>ref|YP_003276009.1| cytochrome c oxidase subunit 1 (mitochondrion) [Pleurozia purpurea]
gi|237780747|gb|ACR19393.1| cytochrome c oxidase subunit
1 [Pleurozia purpurea]
Length = 522
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>ref|YP_539000.2| cytochrome c oxidase subunit 1 [Physcomitrella patens]
gi|186942713|dbj|BAE93071.2| cytochrome c oxidase
subunit 1 (mitochondrion) [Physcomitrella patens]
Length = 522
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>gb|AAZ29195.1| cytochrome c oxidase subunit I [Pellia epiphylla]
Length = 523
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 79
>ref|YP_008816172.1| cytochrome c oxidase subunit 1 (mitochondrion) [Roya obtusa]
gi|557160954|gb|AGZ90368.1| cytochrome c oxidase subunit
1 (mitochondrion) [Roya obtusa]
Length = 523
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC+S + LAQ GNQ+LG NHQLYN+LITAHAF+MI FMV+PA+I
Sbjct: 31 MGTCMSILIRMELAQPGNQILGGNHQLYNVLITAHAFVMIFFMVMPALI 79
>ref|YP_008816006.1| cytochrome c oxidase subunit 1 (mitochondrion) [Closterium
baillyanum] gi|557160681|gb|AGZ90272.1| cytochrome c
oxidase subunit 1 (mitochondrion) [Closterium
baillyanum]
Length = 522
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC+S + LAQ GNQ+LG NHQLYN+LITAH FLMI FMV+PA+I
Sbjct: 31 MGTCMSVLIRMELAQPGNQILGGNHQLYNVLITAHGFLMIFFMVMPALI 79
>gb|ABN50271.1| cytochrome oxidase subunit I [Larix gmelinii var.
principis-rupprechtii]
Length = 485
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ G+Q+LG NHQLYN+LITAHAFLMI FMV+PAVI
Sbjct: 3 MGTCFSVLIRMELAQPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAVI 51
>ref|YP_008816096.1| cytochrome c oxidase subunit 1 (mitochondrion) [Microspora
stagnorum] gi|557160857|gb|AGZ90321.1| cytochrome c
oxidase subunit 1 (mitochondrion) [Microspora stagnorum]
Length = 535
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN++ITAHAFLMI FMV+PA+I
Sbjct: 31 MGTCFSMLIRMELAQPGNQILGGNHQLYNVIITAHAFLMIFFMVMPAMI 79
>dbj|BAJ21558.1| cytochrome c oxidase subunit 1 [Pterosperma cristatum]
Length = 426
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ GNQ+LG NHQLYN++ITAHAFLMI FMV+PA+I
Sbjct: 14 LGTCFSMLIRMELAQPGNQILGGNHQLYNVIITAHAFLMIFFMVMPALI 62
>gb|ABN50288.1| cytochrome oxidase subunit I [Ephedra triandra]
Length = 486
Score = 70.1 bits (170), Expect = 5e-10
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S L LAQ G+QLLG NHQLYN+LITAH FLMI FMV+PAVI
Sbjct: 3 MGTCFSVPLCIELAQPGDQLLGGNHQLYNVLITAHTFLMIFFMVMPAVI 51
>emb|CBJ20678.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 864
Score = 69.7 bits (169), Expect = 7e-10
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -1
Query: 555 VGTCLSANLHT*LAQHGNQLLGRNHQLYNLLITAHAFLMIIFMVIPAVI 409
+GTC S + LAQ G+Q+LG NHQLYN+LITAHAFLMI FMV+PA+I
Sbjct: 370 MGTCFSVLIRMELAQPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMI 418