BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003696
         (850 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, p...   212   2e-52
emb|CBI28783.3| unnamed protein product [Vitis vinifera]              211   2e-52
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   211   2e-52
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S...   211   3e-52
ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [A...   210   6e-52
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A...   208   2e-51
gb|AFW61219.1| DNA topoisomerase I [Zea mays]                         207   3e-51
gb|AFW61218.1| hypothetical protein ZEAMMB73_011101 [Zea mays]        207   3e-51
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform ...   207   4e-51
ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform ...   207   4e-51
ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform ...   207   4e-51
gb|ACL52396.1| unknown [Zea mays]                                     206   7e-51
gb|EMS46223.1| DNA topoisomerase 1 [Triticum urartu]                  205   1e-50
gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii]                203   6e-50
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g...   202   1e-49
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b...   201   3e-49
gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indi...   200   5e-49
ref|XP_003573489.1| PREDICTED: DNA topoisomerase 1-like [Brachyp...   200   6e-49
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The...   197   3e-48
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca...   197   3e-48

>ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, partial [Amborella
           trichopoda] gi|548861621|gb|ERN18992.1| hypothetical
           protein AMTR_s00061p00026580, partial [Amborella
           trichopoda]
          Length = 595

 Score =  212 bits (539), Expect = 2e-52
 Identities = 98/130 (75%), Positives = 109/130 (83%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 260
           K  K  KK    +K  KS K PPGSGDGQKWTTLEHNGVIFPPPY+PHG+KMLYNG PV 
Sbjct: 333 KTGKNTKKEIKKLKQSKSAKGPPGSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYNGLPVD 392

Query: 259 LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 80
           LTPE+EEVAT FAVMK+T+YATKPKFVENF +DW+ ILG  H+I+KFELCD TPIYEWHL
Sbjct: 393 LTPEQEEVATMFAVMKDTEYATKPKFVENFMNDWRVILGKNHIIKKFELCDLTPIYEWHL 452

Query: 79  QEKEKKKQMS 50
           +EKEKKK MS
Sbjct: 453 KEKEKKKHMS 462


>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  211 bits (538), Expect = 2e-52
 Identities = 97/131 (74%), Positives = 111/131 (84%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 260
           K  K  KK   S K  KS K+PP SG+GQKWTTLEHNGVIFPPPY+PHG+KMLYNG+PV 
Sbjct: 152 KKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVD 211

Query: 259 LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 80
           LTPE+EEVAT FAVMK+TDYATKP+F+ENF +DW+  LG  HVI+KFELCDFTPIYEWH 
Sbjct: 212 LTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNHVIKKFELCDFTPIYEWHE 271

Query: 79  QEKEKKKQMST 47
           +EKEKKKQM+T
Sbjct: 272 KEKEKKKQMTT 282


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  211 bits (538), Expect = 2e-52
 Identities = 97/131 (74%), Positives = 111/131 (84%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 260
           K  K  KK   S K  KS K+PP SG+GQKWTTLEHNGVIFPPPY+PHG+KMLYNG+PV 
Sbjct: 311 KKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVD 370

Query: 259 LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 80
           LTPE+EEVAT FAVMK+TDYATKP+F+ENF +DW+  LG  HVI+KFELCDFTPIYEWH 
Sbjct: 371 LTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNHVIKKFELCDFTPIYEWHE 430

Query: 79  QEKEKKKQMST 47
           +EKEKKKQM+T
Sbjct: 431 KEKEKKKQMTT 441


>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
           gi|241940222|gb|EES13367.1| hypothetical protein
           SORBIDRAFT_07g003610 [Sorghum bicolor]
          Length = 921

 Score =  211 bits (537), Expect = 3e-52
 Identities = 96/138 (69%), Positives = 117/138 (84%), Gaps = 6/138 (4%)
 Frame = -1

Query: 442 AKIQKLLKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKML 281
           AK  K LK +G   KN+K+       ++PPGSG+G+KWTTLEHNGVIFPPPY+PHG+KML
Sbjct: 342 AKDIKKLKGKGKLKKNMKNSQFSKTMRVPPGSGEGKKWTTLEHNGVIFPPPYKPHGVKML 401

Query: 280 YNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFT 101
           YNG+PV LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW++ILG  H+I+KFELCDFT
Sbjct: 402 YNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIDNFFTDWRKILGKNHIIKKFELCDFT 461

Query: 100 PIYEWHLQEKEKKKQMST 47
           PIYEWHL+EKEKKKQM+T
Sbjct: 462 PIYEWHLREKEKKKQMTT 479


>ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda]
           gi|548860061|gb|ERN17669.1| hypothetical protein
           AMTR_s00059p00193620 [Amborella trichopoda]
          Length = 884

 Score =  210 bits (534), Expect = 6e-52
 Identities = 96/130 (73%), Positives = 110/130 (84%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 260
           K  K  KK    +K  KS K PPGSGDGQKW+TLEHNGVIFP PY+PHG+KMLYNG+PV 
Sbjct: 326 KTGKNSKKEMKKIKGSKSAKGPPGSGDGQKWSTLEHNGVIFPSPYKPHGVKMLYNGQPVD 385

Query: 259 LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 80
           LTPE+EEVAT FAVMK+T+Y TKPKF++NF +DW+ ILG  HVI+KFELCDFTPIYEWHL
Sbjct: 386 LTPEKEEVATMFAVMKDTEYETKPKFIDNFMNDWRVILGKNHVIKKFELCDFTPIYEWHL 445

Query: 79  QEKEKKKQMS 50
           +EKEKKKQMS
Sbjct: 446 KEKEKKKQMS 455


>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
           topoisomerase I [Zea mays]
          Length = 904

 Score =  208 bits (530), Expect = 2e-51
 Identities = 116/271 (42%), Positives = 148/271 (54%), Gaps = 14/271 (5%)
 Frame = -1

Query: 817 DNSDDEEPLAIRLQRNKKDGNGKVIAE-KSLTSSK-------KRLLDEDGAETHFXXXXX 662
           ++S+DE+PLA R  +    GN K+ +  K LTS         KR LD     +       
Sbjct: 216 EDSEDEKPLAARFSKVAGSGNPKIASSSKGLTSDTNGQQSLGKRPLDSSNQTSSALKKAK 275

Query: 661 XXXXXXXKXXXXXXXXXXDVPIAQRMKNNPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 482
                             + P+AQR+K                                 
Sbjct: 276 PSNVSASAIVRREIKTDDNTPLAQRLKMGE------------------------SSKGKS 311

Query: 481 XXXXXXXXXXXXKAKIQKLLKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVI 320
                         K  K +K +G   KN+K+       K+PPGSG G+KWTTLEHNGVI
Sbjct: 312 SAKSVFKKSPVSVKKDIKKMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVI 371

Query: 319 FPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGP 140
           FPPPY+PHG+KMLYNGKPV LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW+++LG 
Sbjct: 372 FPPPYKPHGVKMLYNGKPVDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGK 431

Query: 139 KHVIQKFELCDFTPIYEWHLQEKEKKKQMST 47
            H+I+ FELCDFTPIYEWHL+EKE+KKQM+T
Sbjct: 432 NHIIKNFELCDFTPIYEWHLREKERKKQMTT 462


>gb|AFW61219.1| DNA topoisomerase I [Zea mays]
          Length = 602

 Score =  207 bits (528), Expect = 3e-51
 Identities = 91/134 (67%), Positives = 113/134 (84%), Gaps = 6/134 (4%)
 Frame = -1

Query: 430 KLLKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 269
           K +K +G   KN+K+       K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+KMLYNGK
Sbjct: 27  KKMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGK 86

Query: 268 PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 89
           P+ LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW+++LG  H+I+ FELCDFTPIYE
Sbjct: 87  PIDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYE 146

Query: 88  WHLQEKEKKKQMST 47
           WHL+EKE+KKQM+T
Sbjct: 147 WHLREKERKKQMTT 160


>gb|AFW61218.1| hypothetical protein ZEAMMB73_011101 [Zea mays]
          Length = 438

 Score =  207 bits (528), Expect = 3e-51
 Identities = 91/134 (67%), Positives = 113/134 (84%), Gaps = 6/134 (4%)
 Frame = -1

Query: 430 KLLKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 269
           K +K +G   KN+K+       K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+KMLYNGK
Sbjct: 27  KKMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGK 86

Query: 268 PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 89
           P+ LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW+++LG  H+I+ FELCDFTPIYE
Sbjct: 87  PIDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYE 146

Query: 88  WHLQEKEKKKQMST 47
           WHL+EKE+KKQM+T
Sbjct: 147 WHLREKERKKQMTT 160


>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Setaria italica]
          Length = 903

 Score =  207 bits (527), Expect = 4e-51
 Identities = 96/140 (68%), Positives = 114/140 (81%), Gaps = 8/140 (5%)
 Frame = -1

Query: 442 AKIQKLLKKRGTSVKNV--------KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIK 287
           A ++K +KK    VK          K+ K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+K
Sbjct: 322 ASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVK 381

Query: 286 MLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCD 107
           MLYNG+PV LTPE+EEVAT FAVMK+TDYA KP F+ENF+ DW+ +LG  HVI+KFELCD
Sbjct: 382 MLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIENFFTDWRTLLGKNHVIKKFELCD 441

Query: 106 FTPIYEWHLQEKEKKKQMST 47
           FTPIYEWHL+EKEKKKQM+T
Sbjct: 442 FTPIYEWHLREKEKKKQMTT 461


>ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Setaria italica]
          Length = 930

 Score =  207 bits (527), Expect = 4e-51
 Identities = 96/140 (68%), Positives = 114/140 (81%), Gaps = 8/140 (5%)
 Frame = -1

Query: 442 AKIQKLLKKRGTSVKNV--------KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIK 287
           A ++K +KK    VK          K+ K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+K
Sbjct: 322 ASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVK 381

Query: 286 MLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCD 107
           MLYNG+PV LTPE+EEVAT FAVMK+TDYA KP F+ENF+ DW+ +LG  HVI+KFELCD
Sbjct: 382 MLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIENFFTDWRTLLGKNHVIKKFELCD 441

Query: 106 FTPIYEWHLQEKEKKKQMST 47
           FTPIYEWHL+EKEKKKQM+T
Sbjct: 442 FTPIYEWHLREKEKKKQMTT 461


>ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Setaria italica]
          Length = 932

 Score =  207 bits (527), Expect = 4e-51
 Identities = 96/140 (68%), Positives = 114/140 (81%), Gaps = 8/140 (5%)
 Frame = -1

Query: 442 AKIQKLLKKRGTSVKNV--------KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIK 287
           A ++K +KK    VK          K+ K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+K
Sbjct: 322 ASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVK 381

Query: 286 MLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCD 107
           MLYNG+PV LTPE+EEVAT FAVMK+TDYA KP F+ENF+ DW+ +LG  HVI+KFELCD
Sbjct: 382 MLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIENFFTDWRTLLGKNHVIKKFELCD 441

Query: 106 FTPIYEWHLQEKEKKKQMST 47
           FTPIYEWHL+EKEKKKQM+T
Sbjct: 442 FTPIYEWHLREKEKKKQMTT 461


>gb|ACL52396.1| unknown [Zea mays]
          Length = 574

 Score =  206 bits (525), Expect = 7e-51
 Identities = 90/132 (68%), Positives = 112/132 (84%), Gaps = 6/132 (4%)
 Frame = -1

Query: 424 LKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPV 263
           +K +G   KN+K+       K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+KMLYNGKP+
Sbjct: 1   MKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGKPI 60

Query: 262 VLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWH 83
            LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW+++LG  H+I+ FELCDFTPIYEWH
Sbjct: 61  DLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYEWH 120

Query: 82  LQEKEKKKQMST 47
           L+EKE+KKQM+T
Sbjct: 121 LREKERKKQMTT 132


>gb|EMS46223.1| DNA topoisomerase 1 [Triticum urartu]
          Length = 947

 Score =  205 bits (522), Expect = 1e-50
 Identities = 92/131 (70%), Positives = 111/131 (84%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 260
           K +   KK   S +  KS ++PPGSG G+KW+TLEHNGVIFPPPY PHG+KMLYNG+PV 
Sbjct: 375 KFKTKTKKTMKSSQFSKSLRVPPGSGGGKKWSTLEHNGVIFPPPYNPHGVKMLYNGQPVE 434

Query: 259 LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 80
           LTPEEEEVAT FAVMK+T+YATK  F++NF+ DWK+ILG  H+I+KFELCDFTPIYEWHL
Sbjct: 435 LTPEEEEVATMFAVMKDTEYATKKTFIDNFFGDWKKILGKNHIIKKFELCDFTPIYEWHL 494

Query: 79  QEKEKKKQMST 47
           +EKEKKKQM++
Sbjct: 495 REKEKKKQMTS 505


>gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii]
          Length = 949

 Score =  203 bits (517), Expect = 6e-50
 Identities = 91/131 (69%), Positives = 110/131 (83%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 260
           K +   KK   S +  KS ++PPGSG G+KW+TLEHNGVIFPPPY PHG+KMLYNG+PV 
Sbjct: 377 KFKTKTKKTMKSSQFSKSLRVPPGSGGGKKWSTLEHNGVIFPPPYNPHGVKMLYNGQPVE 436

Query: 259 LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 80
           LTPEEEEVAT FAVMK+T+YA K  F++NF+ DWK+ILG  H+I+KFELCDFTPIYEWHL
Sbjct: 437 LTPEEEEVATMFAVMKDTEYAAKKTFIDNFFGDWKKILGKNHIIKKFELCDFTPIYEWHL 496

Query: 79  QEKEKKKQMST 47
           +EKEKKKQM++
Sbjct: 497 REKEKKKQMTS 507


>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
           gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
           [Oryza sativa Japonica Group]
           gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
           Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
           protein OsJ_26075 [Oryza sativa Japonica Group]
          Length = 916

 Score =  202 bits (514), Expect = 1e-49
 Identities = 92/134 (68%), Positives = 113/134 (84%), Gaps = 3/134 (2%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNV---KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 269
           K  K+  K   ++KN    K+ K+PPGSG GQKWTTL H+GVIFPPPY+PHG+KMLYNG+
Sbjct: 341 KKMKMKMKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQ 400

Query: 268 PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 89
           PV LTPE+EEVAT FAVMK+TDYA+K  F++NF+ DW++ILG  HVI+KFELCDFTPIYE
Sbjct: 401 PVDLTPEQEEVATMFAVMKDTDYASKQTFIDNFFTDWRKILGKNHVIKKFELCDFTPIYE 460

Query: 88  WHLQEKEKKKQMST 47
           WHL+EKEKKKQM++
Sbjct: 461 WHLREKEKKKQMTS 474


>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
          Length = 911

 Score =  201 bits (511), Expect = 3e-49
 Identities = 86/115 (74%), Positives = 105/115 (91%)
 Frame = -1

Query: 391 KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMK 212
           K+ K+PPGSG GQKWTTL HNGVIFPPPY+PHG+KMLYNG+PV LTPE+EEVAT F+VMK
Sbjct: 355 KTMKVPPGSGGGQKWTTLVHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFSVMK 414

Query: 211 ETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMST 47
           +TDYA+K  F++NF+ DW++ILG  H+I+KFELCDFTPIYEWHL+EKEKKKQM++
Sbjct: 415 DTDYASKQTFIDNFFTDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTS 469


>gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
          Length = 916

 Score =  200 bits (509), Expect = 5e-49
 Identities = 91/134 (67%), Positives = 113/134 (84%), Gaps = 3/134 (2%)
 Frame = -1

Query: 439 KIQKLLKKRGTSVKNV---KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 269
           K  K+  K   ++KN    K+ K+PPGSG GQKWTTL H+GVIFPPPY+PHG+K+LYNG+
Sbjct: 341 KKMKMKLKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKILYNGQ 400

Query: 268 PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 89
           PV LTPE+EEVAT FAVMK+TDYA+K  F++NF+ DW++ILG  HVI+KFELCDFTPIYE
Sbjct: 401 PVDLTPEQEEVATMFAVMKDTDYASKQTFIDNFFTDWRKILGKNHVIKKFELCDFTPIYE 460

Query: 88  WHLQEKEKKKQMST 47
           WHL+EKEKKKQM++
Sbjct: 461 WHLREKEKKKQMTS 474


>ref|XP_003573489.1| PREDICTED: DNA topoisomerase 1-like [Brachypodium distachyon]
          Length = 900

 Score =  200 bits (508), Expect = 6e-49
 Identities = 89/125 (71%), Positives = 108/125 (86%)
 Frame = -1

Query: 421 KKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEE 242
           KK   S +  KS ++PPGSG G+KW+TLEHNGVIFPPPY PHG+KMLYNG+PV LTP +E
Sbjct: 333 KKPMKSSQFSKSLRVPPGSGGGKKWSTLEHNGVIFPPPYSPHGVKMLYNGQPVELTPAQE 392

Query: 241 EVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKK 62
           EVAT FAVMK+T+YATK  F++NF+ DW++ILG  HVI+KFELCDFTPIYEWHL+EKEKK
Sbjct: 393 EVATMFAVMKDTEYATKKTFIDNFFGDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKK 452

Query: 61  KQMST 47
           KQM++
Sbjct: 453 KQMTS 457


>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
          Length = 733

 Score =  197 bits (502), Expect = 3e-48
 Identities = 116/277 (41%), Positives = 146/277 (52%), Gaps = 9/277 (3%)
 Frame = -1

Query: 850 KPPTEDSSKSVDNSDDEEPLAIRLQRNKKDGNGKVIAEKSLTSSKKRLLDEDGAETHFXX 671
           K  T  SS  + + D+++PLA ++Q+N     GK   + S T S KR LD+  +  H   
Sbjct: 83  KSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGK--QQNSSTLSGKRPLDKGNSSDHSSA 140

Query: 670 XXXXXXXXXXKXXXXXXXXXXD--------VPIAQRMKNNPIXXXXXXXXXXXXXXXXXX 515
                                +        +PIAQRMK +                    
Sbjct: 141 KKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSS 200

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXKAKIQKLLKKRGTSVKNVKSQKLPPGSGDGQK-WTTL 338
                                    KI K  KK   S K +KS K+PP SGDGQK W+TL
Sbjct: 201 SFK----------------------KINKKSKKEMKSSKYIKSTKVPPSSGDGQKKWSTL 238

Query: 337 EHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDW 158
            HNGVIFP PY PHG+KMLY+G+PV LTPE+EEVAT FAVMK+TDY +K +F +NFW DW
Sbjct: 239 VHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFWEDW 298

Query: 157 KRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMST 47
            ++LG  H I+  + CDFTPIYEWHLQEKEKKKQMS+
Sbjct: 299 SKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSS 335


>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
           gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
           isoform 3 [Theobroma cacao]
          Length = 836

 Score =  197 bits (502), Expect = 3e-48
 Identities = 116/277 (41%), Positives = 146/277 (52%), Gaps = 9/277 (3%)
 Frame = -1

Query: 850 KPPTEDSSKSVDNSDDEEPLAIRLQRNKKDGNGKVIAEKSLTSSKKRLLDEDGAETHFXX 671
           K  T  SS  + + D+++PLA ++Q+N     GK   + S T S KR LD+  +  H   
Sbjct: 210 KSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGK--QQNSSTLSGKRPLDKGNSSDHSSA 267

Query: 670 XXXXXXXXXXKXXXXXXXXXXD--------VPIAQRMKNNPIXXXXXXXXXXXXXXXXXX 515
                                +        +PIAQRMK +                    
Sbjct: 268 KKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSS 327

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXKAKIQKLLKKRGTSVKNVKSQKLPPGSGDGQK-WTTL 338
                                    KI K  KK   S K +KS K+PP SGDGQK W+TL
Sbjct: 328 SFK----------------------KINKKSKKEMKSSKYIKSTKVPPSSGDGQKKWSTL 365

Query: 337 EHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDW 158
            HNGVIFP PY PHG+KMLY+G+PV LTPE+EEVAT FAVMK+TDY +K +F +NFW DW
Sbjct: 366 VHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFWEDW 425

Query: 157 KRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMST 47
            ++LG  H I+  + CDFTPIYEWHLQEKEKKKQMS+
Sbjct: 426 SKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSS 462