BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003608
         (1206 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164337.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   340   7e-91
ref|XP_004152920.1| PREDICTED: uncharacterized protein LOC101212...   340   7e-91
gb|EXB50274.1| DNA polymerase I [Morus notabilis]                     338   2e-90
gb|EOY12451.1| Polymerase gamma 2 isoform 2 [Theobroma cacao]         338   2e-90
gb|EOY12450.1| Polymerase gamma 2 isoform 1 [Theobroma cacao]         338   2e-90
ref|NP_001189942.1| polymerase gamma 1 [Arabidopsis thaliana] gi...   336   1e-89
ref|NP_188690.3| polymerase gamma 1 [Arabidopsis thaliana] gi|30...   336   1e-89
ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797...   334   4e-89
ref|XP_003544996.2| PREDICTED: uncharacterized protein LOC100807...   334   5e-89
gb|EOY12453.1| Polymerase gamma 2 isoform 4 [Theobroma cacao]         334   5e-89
ref|XP_004295805.1| PREDICTED: uncharacterized protein LOC101293...   333   8e-89
ref|XP_006296787.1| hypothetical protein CARUB_v10016078mg [Caps...   333   1e-88
ref|NP_175498.2| polymerase gamma 2 [Arabidopsis thaliana] gi|33...   333   1e-88
gb|AAL58915.1|AF462826_1 At1g50840/F8A12_8 [Arabidopsis thaliana...   333   1e-88
ref|XP_002317586.2| DNA-directed DNA polymerase family protein [...   332   2e-88
ref|XP_002883254.1| POLGAMMA1 [Arabidopsis lyrata subsp. lyrata]...   332   2e-88
ref|XP_004244135.1| PREDICTED: uncharacterized protein LOC101252...   331   3e-88
ref|XP_002891595.1| hypothetical protein ARALYDRAFT_474208 [Arab...   331   3e-88
ref|XP_006406372.1| hypothetical protein EUTSA_v10019969mg [Eutr...   331   4e-88
dbj|BAB01162.1| unnamed protein product [Arabidopsis thaliana]        330   9e-88

>ref|XP_004164337.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212518 [Cucumis
            sativus]
          Length = 1126

 Score =  340 bits (872), Expect = 7e-91
 Identities = 161/238 (67%), Positives = 200/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            KSM++AF+AGGDFHSRTAMNMYPH+++AV EG V+LEW  +   EKPP+PLLKD FASER
Sbjct: 889  KSMLEAFKAGGDFHSRTAMNMYPHIKKAVEEGSVLLEWDPQPGQEKPPVPLLKDAFASER 948

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GLS+DWKV+ +EA++T+ LWYN+RKEV+EWQ + M +A ++ C
Sbjct: 949  RKAKMLNFSIAYGKTPVGLSRDWKVSLEEAKKTVKLWYNERKEVREWQDLRMAEAAESSC 1008

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V+TLLGR R FP     ++  + H+ RAAINTPVQGSAADVAMCAML+++ N RL+EL W
Sbjct: 1009 VRTLLGRARQFPSMKYATRFQKGHIERAAINTPVQGSAADVAMCAMLEISKNSRLRELGW 1068

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP ESAE AKA+VVECMS PF+ +++LKVDL VDAK  +NWY+AK
Sbjct: 1069 RLLLQVHDEVILEGPTESAEVAKAIVVECMSKPFNGKNILKVDLVVDAKCEQNWYSAK 1126


>ref|XP_004152920.1| PREDICTED: uncharacterized protein LOC101212518 [Cucumis sativus]
          Length = 1136

 Score =  340 bits (872), Expect = 7e-91
 Identities = 161/238 (67%), Positives = 200/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            KSM++AF+AGGDFHSRTAMNMYPH+++AV EG V+LEW  +   EKPP+PLLKD FASER
Sbjct: 899  KSMLEAFKAGGDFHSRTAMNMYPHIKKAVEEGSVLLEWDPQPGQEKPPVPLLKDAFASER 958

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GLS+DWKV+ +EA++T+ LWYN+RKEV+EWQ + M +A ++ C
Sbjct: 959  RKAKMLNFSIAYGKTPVGLSRDWKVSLEEAKKTVKLWYNERKEVREWQDLRMAEAAESSC 1018

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V+TLLGR R FP     ++  + H+ RAAINTPVQGSAADVAMCAML+++ N RL+EL W
Sbjct: 1019 VRTLLGRARQFPSMKYATRFQKGHIERAAINTPVQGSAADVAMCAMLEISKNSRLRELGW 1078

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP ESAE AKA+VVECMS PF+ +++LKVDL VDAK  +NWY+AK
Sbjct: 1079 RLLLQVHDEVILEGPTESAEVAKAIVVECMSKPFNGKNILKVDLVVDAKCEQNWYSAK 1136


>gb|EXB50274.1| DNA polymerase I [Morus notabilis]
          Length = 1147

 Score =  338 bits (868), Expect = 2e-90
 Identities = 162/238 (68%), Positives = 201/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM++AFEAGGDFHSRTAMNMY H+REAV   +V+LEW  +  E KPP+PLLKD F SER
Sbjct: 910  KSMLEAFEAGGDFHSRTAMNMYAHIREAVETKQVLLEWDPQPGEDKPPVPLLKDAFGSER 969

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GL++DWKV+ +EA++T+ LWY +R+EV+ WQ+   E+A++ RC
Sbjct: 970  RKAKMLNFSIAYGKTPVGLARDWKVSLEEAKKTVELWYKERQEVRRWQEKRKEEARRDRC 1029

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V+TLLGR R FP  +T + + + H+ RAAINTPVQGSAADVAMCAML+++ +ERLKEL W
Sbjct: 1030 VRTLLGRARWFPSMETSTYAQRGHIERAAINTPVQGSAADVAMCAMLEISKHERLKELGW 1089

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP+ESAE AKA+VVECMS PFD +++L VDLAVDAK A+NWYAAK
Sbjct: 1090 RLLLQVHDEVILEGPSESAEVAKAIVVECMSKPFDGKNILNVDLAVDAKCAQNWYAAK 1147


>gb|EOY12451.1| Polymerase gamma 2 isoform 2 [Theobroma cacao]
          Length = 1072

 Score =  338 bits (868), Expect = 2e-90
 Identities = 167/239 (69%), Positives = 202/239 (84%), Gaps = 2/239 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM+DAF+AGGDFHSRTAMNMY H+REAV + +V+LEW  +  E KPP+PLLKD F SER
Sbjct: 834  KSMLDAFKAGGDFHSRTAMNMYSHIREAVEKRQVLLEWHPQPGEEKPPVPLLKDAFTSER 893

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GL+KDWKV+ +EA+ T++LWY +R+EV EWQK    +AQK R 
Sbjct: 894  RKAKMLNFSIAYGKTPVGLAKDWKVSVEEAKNTVDLWYKERQEVLEWQKQRKYEAQKLRR 953

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            VKTLLGR R FP +   +++ + H+ RAAINTPVQGSAADVAMCAML+++ NERLKEL W
Sbjct: 954  VKTLLGRARLFPSYAHATRAQKGHIERAAINTPVQGSAADVAMCAMLQISKNERLKELGW 1013

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDE-RDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP+ESAE AKA+VVECMS PF+E +++LKVDLAVDAK A+NWYAAK
Sbjct: 1014 RLLLQVHDEVILEGPSESAETAKAIVVECMSKPFEEGKNILKVDLAVDAKCAQNWYAAK 1072


>gb|EOY12450.1| Polymerase gamma 2 isoform 1 [Theobroma cacao]
          Length = 1159

 Score =  338 bits (868), Expect = 2e-90
 Identities = 167/239 (69%), Positives = 202/239 (84%), Gaps = 2/239 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM+DAF+AGGDFHSRTAMNMY H+REAV + +V+LEW  +  E KPP+PLLKD F SER
Sbjct: 921  KSMLDAFKAGGDFHSRTAMNMYSHIREAVEKRQVLLEWHPQPGEEKPPVPLLKDAFTSER 980

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GL+KDWKV+ +EA+ T++LWY +R+EV EWQK    +AQK R 
Sbjct: 981  RKAKMLNFSIAYGKTPVGLAKDWKVSVEEAKNTVDLWYKERQEVLEWQKQRKYEAQKLRR 1040

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            VKTLLGR R FP +   +++ + H+ RAAINTPVQGSAADVAMCAML+++ NERLKEL W
Sbjct: 1041 VKTLLGRARLFPSYAHATRAQKGHIERAAINTPVQGSAADVAMCAMLQISKNERLKELGW 1100

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDE-RDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP+ESAE AKA+VVECMS PF+E +++LKVDLAVDAK A+NWYAAK
Sbjct: 1101 RLLLQVHDEVILEGPSESAETAKAIVVECMSKPFEEGKNILKVDLAVDAKCAQNWYAAK 1159


>ref|NP_001189942.1| polymerase gamma 1 [Arabidopsis thaliana] gi|332642872|gb|AEE76393.1|
            polymerase gamma 1 [Arabidopsis thaliana]
          Length = 1049

 Score =  336 bits (861), Expect = 1e-89
 Identities = 163/238 (68%), Positives = 204/238 (85%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            +SM +AF AGGDFHSRTAMNMYPH+REAV  G+V+LEW  +   EKPP+PLLKD FASER
Sbjct: 814  ESMKEAFIAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASER 873

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTAIGLS+DWKV+R+EAQ+T+NLWYNDR+EV++WQ++  ++A +   
Sbjct: 874  RKAKMLNFSIAYGKTAIGLSRDWKVSREEAQDTVNLWYNDRQEVRKWQELRKKEAIQKGY 933

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP++   S++ ++H+ RAAINTPVQGSAADVAMCAML++++N+RLKEL W
Sbjct: 934  VLTLLGRARKFPEYR--SRAQKNHIERAAINTPVQGSAADVAMCAMLEISNNQRLKELGW 991

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP+ESAE AK +VV CMS PF+ +++L VDL+VDAK A+NWYA K
Sbjct: 992  KLLLQVHDEVILEGPSESAENAKDIVVNCMSEPFNGKNILSVDLSVDAKCAQNWYAGK 1049


>ref|NP_188690.3| polymerase gamma 1 [Arabidopsis thaliana] gi|30313818|gb|AAO34128.1|
            PolI-like DNA polymerase [Arabidopsis thaliana]
            gi|71013474|dbj|BAE10874.1| PolI-like B DNA polymerase
            [Arabidopsis thaliana] gi|110741933|dbj|BAE98907.1|
            putative DNA polymerase [Arabidopsis thaliana]
            gi|332642871|gb|AEE76392.1| polymerase gamma 1
            [Arabidopsis thaliana]
          Length = 1034

 Score =  336 bits (861), Expect = 1e-89
 Identities = 163/238 (68%), Positives = 204/238 (85%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            +SM +AF AGGDFHSRTAMNMYPH+REAV  G+V+LEW  +   EKPP+PLLKD FASER
Sbjct: 799  ESMKEAFIAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASER 858

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTAIGLS+DWKV+R+EAQ+T+NLWYNDR+EV++WQ++  ++A +   
Sbjct: 859  RKAKMLNFSIAYGKTAIGLSRDWKVSREEAQDTVNLWYNDRQEVRKWQELRKKEAIQKGY 918

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP++   S++ ++H+ RAAINTPVQGSAADVAMCAML++++N+RLKEL W
Sbjct: 919  VLTLLGRARKFPEYR--SRAQKNHIERAAINTPVQGSAADVAMCAMLEISNNQRLKELGW 976

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP+ESAE AK +VV CMS PF+ +++L VDL+VDAK A+NWYA K
Sbjct: 977  KLLLQVHDEVILEGPSESAENAKDIVVNCMSEPFNGKNILSVDLSVDAKCAQNWYAGK 1034


>ref|XP_003518521.1| PREDICTED: uncharacterized protein LOC100797016 [Glycine max]
          Length = 1077

 Score =  334 bits (857), Expect = 4e-89
 Identities = 162/238 (68%), Positives = 199/238 (83%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM++AFEAGGDFHSRTAMNMYPH+REAV + +V+LEW  +  E KPP+PLLKD FASER
Sbjct: 840  KSMLEAFEAGGDFHSRTAMNMYPHIREAVEKKEVLLEWHPQPGEDKPPVPLLKDAFASER 899

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GLSKDWKV+ +EA++T++LWYNDRKEV +WQ+   ++A+   C
Sbjct: 900  RKAKMLNFSIAYGKTPVGLSKDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEARVLHC 959

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP     +   + H+ RAAINTPVQGSAADVAMCAML+++ N+RLKEL W
Sbjct: 960  VYTLLGRARRFPLMAQANTYQKGHIERAAINTPVQGSAADVAMCAMLQISKNKRLKELGW 1019

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP ESAE AK++VVECMS PF+ +++LKVDL+VDAK A+NWY+ K
Sbjct: 1020 KLLLQVHDEVILEGPTESAEVAKSIVVECMSKPFNGKNILKVDLSVDAKCAQNWYSGK 1077


>ref|XP_003544996.2| PREDICTED: uncharacterized protein LOC100807239 [Glycine max]
          Length = 1074

 Score =  334 bits (856), Expect = 5e-89
 Identities = 161/238 (67%), Positives = 199/238 (83%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM++AFEAGGDFHSRTAMNMYPH+REAV + +V+LEW  +  E KPP+PLLKD FASER
Sbjct: 837  KSMLEAFEAGGDFHSRTAMNMYPHIREAVEKKEVLLEWHPQPGEDKPPVPLLKDAFASER 896

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GLSKDWKV+ +EA++T++LWYNDRKEV +WQ+   ++A+   C
Sbjct: 897  RKAKMLNFSIAYGKTPVGLSKDWKVSVKEAKKTVDLWYNDRKEVLQWQEERKKEARVLHC 956

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP     +   + H+ RAAINTPVQGSAADVAMCAML+++ N+RLKEL W
Sbjct: 957  VYTLLGRARRFPLMAQANTYQKGHIERAAINTPVQGSAADVAMCAMLQISKNKRLKELGW 1016

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP ESAE AK++V+ECMS PF+ +++LKVDL+VDAK A+NWY+ K
Sbjct: 1017 KLLLQVHDEVILEGPTESAEVAKSIVIECMSKPFNGKNILKVDLSVDAKCAQNWYSGK 1074


>gb|EOY12453.1| Polymerase gamma 2 isoform 4 [Theobroma cacao]
          Length = 1160

 Score =  334 bits (856), Expect = 5e-89
 Identities = 167/240 (69%), Positives = 202/240 (84%), Gaps = 3/240 (1%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM+DAF+AGGDFHSRTAMNMY H+REAV + +V+LEW  +  E KPP+PLLKD F SER
Sbjct: 921  KSMLDAFKAGGDFHSRTAMNMYSHIREAVEKRQVLLEWHPQPGEEKPPVPLLKDAFTSER 980

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GL+KDWKV+ +EA+ T++LWY +R+EV EWQK    +AQK R 
Sbjct: 981  RKAKMLNFSIAYGKTPVGLAKDWKVSVEEAKNTVDLWYKERQEVLEWQKQRKYEAQKLRR 1040

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            VKTLLGR R FP +   +++ + H+ RAAINTPVQGSAADVAMCAML+++ NERLKEL W
Sbjct: 1041 VKTLLGRARLFPSYAHATRAQKGHIERAAINTPVQGSAADVAMCAMLQISKNERLKELGW 1100

Query: 668  DLILQ-VHDEVILEGPAESAEEAKALVVECMSNPFDE-RDLLKVDLAVDAKYAENWYAAK 495
             L+LQ VHDEVILEGP+ESAE AKA+VVECMS PF+E +++LKVDLAVDAK A+NWYAAK
Sbjct: 1101 RLLLQVVHDEVILEGPSESAETAKAIVVECMSKPFEEGKNILKVDLAVDAKCAQNWYAAK 1160


>ref|XP_004295805.1| PREDICTED: uncharacterized protein LOC101293674 [Fragaria vesca
            subsp. vesca]
          Length = 1072

 Score =  333 bits (854), Expect = 8e-89
 Identities = 158/238 (66%), Positives = 200/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM+DAF+AGGDFHSRTAMNMY H+REAV   +V+LEW  +  + KPP+P+LKD + SER
Sbjct: 835  KSMLDAFKAGGDFHSRTAMNMYQHIREAVENKEVLLEWDPQPGQDKPPVPMLKDTYGSER 894

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GLS+DWKV+ Q+A++T+ LWY +RKEV+ WQ+   ++A++ RC
Sbjct: 895  RKAKMLNFSIAYGKTPVGLSRDWKVSVQDAEKTVELWYKERKEVRRWQEERKKEAKEYRC 954

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V+TLLGR R FP     S++ + H+ RAAINTPVQGSAADVAMCAML++++NE LKEL W
Sbjct: 955  VRTLLGRARWFPSLTRASRAQRGHIERAAINTPVQGSAADVAMCAMLEISNNEHLKELGW 1014

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP+ESAE AKA+VV+CMS PF+ +++L VDLAVDAK A+NWYAAK
Sbjct: 1015 RLLLQVHDEVILEGPSESAEVAKAIVVDCMSKPFNGKNILNVDLAVDAKCAQNWYAAK 1072


>ref|XP_006296787.1| hypothetical protein CARUB_v10016078mg [Capsella rubella]
            gi|482565496|gb|EOA29685.1| hypothetical protein
            CARUB_v10016078mg [Capsella rubella]
          Length = 1042

 Score =  333 bits (853), Expect = 1e-88
 Identities = 161/238 (67%), Positives = 202/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            KSM++AF AGGDFHSRTAMNMYPH+REAV  G+V+LEW  +   EKPP+PLLKD FASER
Sbjct: 807  KSMMEAFIAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASER 866

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTA+GLS+DWKV+R+EAQ+T++LWYNDR+EV++WQ++  ++A +   
Sbjct: 867  RKAKMLNFSIAYGKTAVGLSRDWKVSREEAQDTVDLWYNDRQEVRKWQELRKKEAIQKGY 926

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP +   S++ ++H+ RAAINTPVQGSAADVAMCAML+++ N+RLKEL W
Sbjct: 927  VLTLLGRARKFPVYS--SRAQKNHIQRAAINTPVQGSAADVAMCAMLEISKNQRLKELGW 984

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP+ESAE AK +VV CM  PF+ +++L VDL+VDAK A+NWYA K
Sbjct: 985  KLLLQVHDEVILEGPSESAETAKDIVVNCMCKPFNGKNILSVDLSVDAKCAQNWYAGK 1042


>ref|NP_175498.2| polymerase gamma 2 [Arabidopsis thaliana] gi|332194474|gb|AEE32595.1|
            polymerase gamma 2 [Arabidopsis thaliana]
          Length = 1050

 Score =  333 bits (853), Expect = 1e-88
 Identities = 164/238 (68%), Positives = 203/238 (85%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM++AF+AGGDFHSRTAMNMYPHVREAV  G+VILEW  E  E KPP+PLLKD F SER
Sbjct: 815  KSMMEAFKAGGDFHSRTAMNMYPHVREAVENGQVILEWHPEPGEDKPPVPLLKDAFGSER 874

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTA+GLS+DWKV+ +EAQET++LWYNDR+EV++WQ+M  ++A +   
Sbjct: 875  RKAKMLNFSIAYGKTAVGLSRDWKVSTKEAQETVDLWYNDRQEVRKWQEMRKKEAIEDGY 934

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP   + S++ ++H+ RAAINTPVQGSAADVAMCAML+++ N++LK+L W
Sbjct: 935  VLTLLGRSRRFPA--SKSRAQRNHIQRAAINTPVQGSAADVAMCAMLEISINQQLKKLGW 992

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQ+HDEVILEGP ESAE AK +VV+CMS PF+ R++L VDL+VDAK A+NWYAAK
Sbjct: 993  RLLLQIHDEVILEGPIESAEIAKDIVVDCMSKPFNGRNILSVDLSVDAKCAQNWYAAK 1050


>gb|AAL58915.1|AF462826_1 At1g50840/F8A12_8 [Arabidopsis thaliana] gi|20259545|gb|AAM13892.1|
            putative DNA polymerase A family protein [Arabidopsis
            thaliana] gi|71013470|dbj|BAE10873.1| PolI-like A DNA
            polymerase [Arabidopsis thaliana]
          Length = 1049

 Score =  333 bits (853), Expect = 1e-88
 Identities = 164/238 (68%), Positives = 203/238 (85%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM++AF+AGGDFHSRTAMNMYPHVREAV  G+VILEW  E  E KPP+PLLKD F SER
Sbjct: 814  KSMMEAFKAGGDFHSRTAMNMYPHVREAVENGQVILEWHPEPGEDKPPVPLLKDAFGSER 873

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTA+GLS+DWKV+ +EAQET++LWYNDR+EV++WQ+M  ++A +   
Sbjct: 874  RKAKMLNFSIAYGKTAVGLSRDWKVSTKEAQETVDLWYNDRQEVRKWQEMRKKEAIEDGY 933

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP   + S++ ++H+ RAAINTPVQGSAADVAMCAML+++ N++LK+L W
Sbjct: 934  VLTLLGRSRRFPA--SKSRAQRNHIQRAAINTPVQGSAADVAMCAMLEISINQQLKKLGW 991

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQ+HDEVILEGP ESAE AK +VV+CMS PF+ R++L VDL+VDAK A+NWYAAK
Sbjct: 992  RLLLQIHDEVILEGPIESAEIAKDIVVDCMSKPFNGRNILSVDLSVDAKCAQNWYAAK 1049


>ref|XP_002317586.2| DNA-directed DNA polymerase family protein [Populus trichocarpa]
            gi|550328359|gb|EEE98198.2| DNA-directed DNA polymerase
            family protein [Populus trichocarpa]
          Length = 888

 Score =  332 bits (851), Expect = 2e-88
 Identities = 162/238 (68%), Positives = 197/238 (82%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM+DAF+AGGDFHSRTA+NMYPH+REA+ + +V+LEW  +  E KPP+PLLKD FASER
Sbjct: 651  KSMLDAFKAGGDFHSRTAVNMYPHIREAIEKKRVLLEWYPQPGEDKPPVPLLKDAFASER 710

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT +GLS+DWKV+  EA+ET+NLWY +RKEV +WQ+   ++A++   
Sbjct: 711  RKAKMLNFSIAYGKTPVGLSRDWKVSVAEAKETVNLWYKERKEVLKWQQARKKEAREDGR 770

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP     S S++ H+ RAAINTPVQGSAADVAMCAML+++ N RLKEL W
Sbjct: 771  VHTLLGRARVFPSLTDASSSLRGHVERAAINTPVQGSAADVAMCAMLEISKNNRLKELGW 830

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP ESAE AKA+VV+CMS PF  ++ LKVDLAVDAK A+NWY+AK
Sbjct: 831  KLLLQVHDEVILEGPTESAEVAKAIVVDCMSKPFGGKNFLKVDLAVDAKCAQNWYSAK 888


>ref|XP_002883254.1| POLGAMMA1 [Arabidopsis lyrata subsp. lyrata]
            gi|297329094|gb|EFH59513.1| POLGAMMA1 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1044

 Score =  332 bits (850), Expect = 2e-88
 Identities = 162/238 (68%), Positives = 201/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            KSM +AF AGGDFHSRTAMNMYPH+REAV  G+V+LEW  +   EKPP+PLLKD FASER
Sbjct: 809  KSMKEAFIAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASER 868

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTAIGLS+DWKV+ +EAQ+T+NLWYNDR+EV++WQ++  ++A +   
Sbjct: 869  RKAKMLNFSIAYGKTAIGLSRDWKVSIEEAQDTVNLWYNDRQEVRKWQELRKKEAIQNGY 928

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP +   S++ ++H+ RAAINTPVQGSAADVAMCAML+++ N+RLKEL W
Sbjct: 929  VLTLLGRARKFPVYR--SRAQKNHIERAAINTPVQGSAADVAMCAMLEISKNQRLKELGW 986

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQ+HDEVILEGP+ESAE AK +VV CMS PF+ +++L VDL+VDAK A+NWYA K
Sbjct: 987  KLLLQIHDEVILEGPSESAENAKDIVVNCMSEPFNGKNILSVDLSVDAKCAQNWYAGK 1044


>ref|XP_004244135.1| PREDICTED: uncharacterized protein LOC101252794 [Solanum
            lycopersicum]
          Length = 1119

 Score =  331 bits (849), Expect = 3e-88
 Identities = 161/238 (67%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM+ AFEAGGDFHSRTAMNMYPH+REAV +G+V+LEW  +  E KPP+PLLKD F SER
Sbjct: 882  KSMLGAFEAGGDFHSRTAMNMYPHIREAVEKGQVLLEWHPQPGEDKPPVPLLKDAFGSER 941

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKT IGLS+DWKV+ +EA+ET+  WY+DRKEV +WQ+    +A++  C
Sbjct: 942  RKAKMLNFSIAYGKTTIGLSRDWKVSVKEAKETVERWYSDRKEVSDWQEQRRFEAREFGC 1001

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP     + S++ H+ RAAINTPVQGSAADVAMCAML+++ N RLKEL W
Sbjct: 1002 VHTLLGRARWFPSVKNATGSVKGHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGW 1061

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQVHDEVILEGP ES EEA A+VV CMSNPF+ +++L+V L+VDAK A+NWY+AK
Sbjct: 1062 KLLLQVHDEVILEGPEESEEEAMAIVVHCMSNPFNGKNILRVGLSVDAKCAKNWYSAK 1119


>ref|XP_002891595.1| hypothetical protein ARALYDRAFT_474208 [Arabidopsis lyrata subsp.
            lyrata] gi|297337437|gb|EFH67854.1| hypothetical protein
            ARALYDRAFT_474208 [Arabidopsis lyrata subsp. lyrata]
          Length = 1047

 Score =  331 bits (849), Expect = 3e-88
 Identities = 161/238 (67%), Positives = 202/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKNE-KPPLPLLKDVFASER 1029
            KSM++AF+AGGDFHSRTAMNMYPH+REAV  G+VILEW  +  E KPP+PLLKD F SER
Sbjct: 812  KSMMEAFKAGGDFHSRTAMNMYPHIREAVENGQVILEWHPQPGEDKPPVPLLKDAFGSER 871

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTAIGLS+DWKV+ +EAQ+T+ LWYNDR+EV++WQ+   ++A +   
Sbjct: 872  RKAKMLNFSIAYGKTAIGLSRDWKVSVEEAQDTVKLWYNDRQEVRKWQERRKKEAIEDGY 931

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V+TLLGR R FP +   S++ ++H+ RAAINTPVQGSAADVAMCAML+++ N++LK+L W
Sbjct: 932  VRTLLGRSRRFPRYK--SRAQKNHIQRAAINTPVQGSAADVAMCAMLEISTNQQLKKLGW 989

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQ+HDEVILEGP ESAE AK +VV+CMS PF+ R++L VDL+VDAK A+NWYAAK
Sbjct: 990  RLLLQIHDEVILEGPIESAEIAKDIVVDCMSKPFNGRNILSVDLSVDAKCAQNWYAAK 1047


>ref|XP_006406372.1| hypothetical protein EUTSA_v10019969mg [Eutrema salsugineum]
            gi|557107518|gb|ESQ47825.1| hypothetical protein
            EUTSA_v10019969mg [Eutrema salsugineum]
          Length = 1050

 Score =  331 bits (848), Expect = 4e-88
 Identities = 161/238 (67%), Positives = 202/238 (84%), Gaps = 1/238 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            KSM++AF AGGDFHSRTAMNMYPH+REAV  G+V+LEW  +   EKPP+PLLKD FASER
Sbjct: 815  KSMMEAFVAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASER 874

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTAIGL+KDWKV+ +EAQET+NLWYNDR+EV++WQ++  ++A +   
Sbjct: 875  RKAKMLNFSIAYGKTAIGLAKDWKVSVEEAQETVNLWYNDRQEVRKWQELRKKEAIENGY 934

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R F  + +C +  ++H+ RAAIN+PVQGSAADVAMCAML+++ N+RLKEL W
Sbjct: 935  VLTLLGRARKFSAYRSCGQ--KNHIKRAAINSPVQGSAADVAMCAMLEISRNKRLKELGW 992

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENWYAAK 495
             L+LQ+HDEVILEGP+ESAE AK +VV+CM  PF+ +++L VDL+VDAK A+NWYAAK
Sbjct: 993  KLLLQIHDEVILEGPSESAEIAKDIVVDCMCKPFNGKNILSVDLSVDAKCAQNWYAAK 1050


>dbj|BAB01162.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1088

 Score =  330 bits (845), Expect = 9e-88
 Identities = 160/234 (68%), Positives = 201/234 (85%), Gaps = 1/234 (0%)
 Frame = -2

Query: 1205 KSMIDAFEAGGDFHSRTAMNMYPHVREAVHEGKVILEWQSEKN-EKPPLPLLKDVFASER 1029
            +SM +AF AGGDFHSRTAMNMYPH+REAV  G+V+LEW  +   EKPP+PLLKD FASER
Sbjct: 764  ESMKEAFIAGGDFHSRTAMNMYPHIREAVENGEVLLEWHPQPGQEKPPVPLLKDAFASER 823

Query: 1028 RKAKMLNFSIAYGKTAIGLSKDWKVTRQEAQETLNLWYNDRKEVQEWQKMCMEQAQKTRC 849
            RKAKMLNFSIAYGKTAIGLS+DWKV+R+EAQ+T+NLWYNDR+EV++WQ++  ++A +   
Sbjct: 824  RKAKMLNFSIAYGKTAIGLSRDWKVSREEAQDTVNLWYNDRQEVRKWQELRKKEAIQKGY 883

Query: 848  VKTLLGRPRHFPDFDTCSKSMQHHLLRAAINTPVQGSAADVAMCAMLKLADNERLKELQW 669
            V TLLGR R FP++   S++ ++H+ RAAINTPVQGSAADVAMCAML++++N+RLKEL W
Sbjct: 884  VLTLLGRARKFPEYR--SRAQKNHIERAAINTPVQGSAADVAMCAMLEISNNQRLKELGW 941

Query: 668  DLILQVHDEVILEGPAESAEEAKALVVECMSNPFDERDLLKVDLAVDAKYAENW 507
             L+LQVHDEVILEGP+ESAE AK +VV CMS PF+ +++L VDL+VDAK A+NW
Sbjct: 942  KLLLQVHDEVILEGPSESAENAKDIVVNCMSEPFNGKNILSVDLSVDAKCAQNW 995