BLASTX nr result
ID: Ephedra26_contig00003521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00003521
(499 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26473.1| unknown [Picea sitchensis] 73 3e-11
ref|XP_003562889.1| PREDICTED: ribosome-recycling factor, chloro... 67 2e-09
ref|XP_002444910.1| hypothetical protein SORBIDRAFT_07g001230 [S... 66 4e-09
emb|CBI28691.3| unnamed protein product [Vitis vinifera] 66 6e-09
gb|ACN36189.1| unknown [Zea mays] gi|413921479|gb|AFW61411.1| ri... 66 6e-09
ref|NP_001150478.1| ribosome recycling factor [Zea mays] gi|1956... 66 6e-09
emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera] 66 6e-09
ref|XP_006658715.1| PREDICTED: ribosome-recycling factor, chloro... 65 7e-09
gb|EOX94756.1| Ribosome recycling factor isoform 3 [Theobroma ca... 65 9e-09
gb|EOX94755.1| Ribosome recycling factor isoform 2 [Theobroma ca... 65 9e-09
gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma ca... 65 9e-09
gb|AFW63903.1| hypothetical protein ZEAMMB73_990401 [Zea mays] 65 9e-09
dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgar... 65 9e-09
ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloro... 65 9e-09
ref|XP_004972483.1| PREDICTED: ribosome-recycling factor, chloro... 65 1e-08
ref|NP_001060047.1| Os07g0570700 [Oryza sativa Japonica Group] g... 65 1e-08
ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloro... 64 2e-08
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro... 64 3e-08
gb|EPS71455.1| hypothetical protein M569_03303, partial [Genlise... 64 3e-08
ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloro... 64 3e-08
>gb|ABK26473.1| unknown [Picea sitchensis]
Length = 279
Score = 73.2 bits (178), Expect = 3e-11
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Frame = -3
Query: 386 MATSVSGASSVFAMIPSRFRCTHSCLKGASKAAIIYQKSNLLECKL---GKVACLALSFH 216
MAT+ S A S + + R H G + A ++ + + ++ KV + S
Sbjct: 1 MATTFSCALSGSTI--ASIRRGHEASFGQAYEAKVFGRCHCVQANTFGGRKVPHVIRSLT 58
Query: 215 LKESFFGHYQSTTTLHKKRDISL----CATLEEIKATRETVEGAAKERMEKALEAVQSSY 48
+++FFG S T HK+R++ CAT+EEI+A ++ +E A ERMEK LE +++++
Sbjct: 59 SRDNFFGKSLSVTFSHKERNVRTGVCRCATIEEIEAEKQLIEEDAIERMEKTLETIKTNF 118
Query: 47 NGLRTGRANPLLLDR 3
N +RTGRA+P LDR
Sbjct: 119 NSIRTGRASPAFLDR 133
>ref|XP_003562889.1| PREDICTED: ribosome-recycling factor, chloroplastic-like
[Brachypodium distachyon]
Length = 266
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/116 (35%), Positives = 66/116 (56%)
Frame = -3
Query: 350 AMIPSRFRCTHSCLKGASKAAIIYQKSNLLECKLGKVACLALSFHLKESFFGHYQSTTTL 171
A +P R C CL +S+++++ +N ++ G V + ++ S
Sbjct: 21 ARLPQRPGC--GCL--SSRSSLLSSSTNFMKLHSGAVGFFSAPLVIQYS----------- 65
Query: 170 HKKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + AT+EEI+A + +E AKE+MEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 66 -DKRAVLRHATIEEIEAEKTIIEDQAKEKMEKAIETVQTNFNTVRTGRANPAMLDR 120
>ref|XP_002444910.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
gi|241941260|gb|EES14405.1| hypothetical protein
SORBIDRAFT_07g001230 [Sorghum bicolor]
Length = 265
Score = 66.2 bits (160), Expect = 4e-09
Identities = 43/114 (37%), Positives = 59/114 (51%)
Frame = -3
Query: 344 IPSRFRCTHSCLKGASKAAIIYQKSNLLECKLGKVACLALSFHLKESFFGHYQSTTTLHK 165
+P R C CL S A +Y N + G V FG
Sbjct: 22 LPQRPGC--GCLPKQSLA--VYSSINFARLRAGPVD------------FGGRPLVLRHSD 65
Query: 164 KRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + + AT+EEI+A + +E AKE+MEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 66 KRAVLMHATIEEIEAEKSLIEDQAKEKMEKAIETVQTNFNTVRTGRANPAMLDR 119
>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 65.9 bits (159), Expect = 6e-09
Identities = 29/55 (52%), Positives = 42/55 (76%)
Frame = -3
Query: 167 KKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
K+ I CAT+EEI+A + ++E KERMEK +E V++++N +RTGRANP +LDR
Sbjct: 74 KRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDR 128
>gb|ACN36189.1| unknown [Zea mays] gi|413921479|gb|AFW61411.1| ribosome recycling
factor [Zea mays]
Length = 264
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = -3
Query: 164 KRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + + AT+EEI+A + +E AKE+MEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 65 KRAVLMHATIEEIEAEKSLIEDQAKEKMEKAIETVQANFNTVRTGRANPAMLDR 118
>ref|NP_001150478.1| ribosome recycling factor [Zea mays] gi|195639534|gb|ACG39235.1|
ribosome recycling factor [Zea mays]
Length = 264
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = -3
Query: 164 KRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + + AT+EEI+A + +E AKE+MEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 65 KRAVLMHATIEEIEAEKSLIEDQAKEKMEKAIETVQANFNTVRTGRANPAMLDR 118
>emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
Length = 222
Score = 65.9 bits (159), Expect = 6e-09
Identities = 29/55 (52%), Positives = 42/55 (76%)
Frame = -3
Query: 167 KKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
K+ I CAT+EEI+A + ++E KERMEK +E V++++N +RTGRANP +LDR
Sbjct: 74 KRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDR 128
>ref|XP_006658715.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Oryza
brachyantha]
Length = 242
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = -3
Query: 314 CLKGAS--KAAIIYQKSNLLECKLGKVACLALSFHLKESFFGHYQSTTTLHKKRDISLCA 141
CL G + + I+ +N + + G + L+ S KR + A
Sbjct: 3 CLTGCAPERPTILSSSTNFMSIRAGPMRFCTTPLVLQNS------------DKRAVLRHA 50
Query: 140 TLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
T+EEI+A + +E A+ERMEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 51 TIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAMLDR 96
>gb|EOX94756.1| Ribosome recycling factor isoform 3 [Theobroma cacao]
Length = 285
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = -3
Query: 173 LHKKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
L K+ + CAT+EEI+A + ++E AK RMEK +E V++++N +RTGRANP +LD+
Sbjct: 75 LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFNSIRTGRANPAILDK 131
>gb|EOX94755.1| Ribosome recycling factor isoform 2 [Theobroma cacao]
Length = 300
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = -3
Query: 173 LHKKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
L K+ + CAT+EEI+A + ++E AK RMEK +E V++++N +RTGRANP +LD+
Sbjct: 75 LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFNSIRTGRANPAILDK 131
>gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
Length = 277
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/57 (49%), Positives = 43/57 (75%)
Frame = -3
Query: 173 LHKKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
L K+ + CAT+EEI+A + ++E AK RMEK +E V++++N +RTGRANP +LD+
Sbjct: 75 LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFNSIRTGRANPAILDK 131
>gb|AFW63903.1| hypothetical protein ZEAMMB73_990401 [Zea mays]
Length = 153
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = -3
Query: 164 KRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + + AT+EEI+A + +E AKE+MEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 65 KRAVLMHATIEEIEAEKSFIEDQAKEKMEKAIEIVQANFNTVRTGRANPAMLDR 118
>dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512904|dbj|BAK03359.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 266
Score = 65.1 bits (157), Expect = 9e-09
Identities = 42/116 (36%), Positives = 65/116 (56%)
Frame = -3
Query: 350 AMIPSRFRCTHSCLKGASKAAIIYQKSNLLECKLGKVACLALSFHLKESFFGHYQSTTTL 171
A +P R C CL +++++++ +N ++ + G V + L+ S
Sbjct: 21 ARLPQRPGC--GCL--SNRSSLLSSPTNFMKIQSGAVGFFGVPLVLQHS----------- 65
Query: 170 HKKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + AT EEI+ + VE AKE+MEKA+E VQS++N +RTGRANP +LDR
Sbjct: 66 -DKRAVLRHATNEEIEEEKTIVEEQAKEKMEKAIETVQSNFNTVRTGRANPSMLDR 120
>ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
vinifera]
Length = 280
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = -3
Query: 164 KRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
K I CAT+EEI+A + ++E KERMEK +E V++++N +RTGRANP +LDR
Sbjct: 81 KTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGRANPAILDR 134
>ref|XP_004972483.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform X1
[Setaria italica] gi|514792078|ref|XP_004972484.1|
PREDICTED: ribosome-recycling factor, chloroplastic-like
isoform X2 [Setaria italica]
Length = 258
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = -3
Query: 164 KRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + AT+EEI+A + +E AKE+MEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 59 KRAVLTHATIEEIEAEKSVIEEQAKEKMEKAIETVQTNFNTVRTGRANPAMLDR 112
>ref|NP_001060047.1| Os07g0570700 [Oryza sativa Japonica Group]
gi|158513666|sp|A2YMU2.2|RRFC_ORYSI RecName:
Full=Ribosome-recycling factor, chloroplastic;
Short=RRF; AltName: Full=Protein OsL8; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor gi|158513703|sp|A3BLC3.2|RRFC_ORYSJ RecName:
Full=Ribosome-recycling factor, chloroplastic;
Short=RRF; AltName: Full=Protein OsL8; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor gi|34394208|dbj|BAC84660.1| putative Ribosome
recycling factor, chloroplast precursor [Oryza sativa
Japonica Group] gi|113611583|dbj|BAF21961.1|
Os07g0570700 [Oryza sativa Japonica Group]
gi|218199871|gb|EEC82298.1| hypothetical protein
OsI_26546 [Oryza sativa Indica Group]
gi|222637311|gb|EEE67443.1| hypothetical protein
OsJ_24808 [Oryza sativa Japonica Group]
Length = 266
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = -3
Query: 164 KRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
KR + AT+EEI+A + +E A+ERMEKA+E VQ+++N +RTGRANP +LDR
Sbjct: 67 KRAVLRHATIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAMLDR 120
>ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cicer
arietinum]
Length = 265
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = -3
Query: 176 TLHKKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
TLHK++ I AT+EEI+A + ++E K RME+ LE V+++++ +RTGRANP +LD+
Sbjct: 62 TLHKRKGIVRAATIEEIEAEKASIENDVKNRMERTLENVRTNFSSIRTGRANPSMLDK 119
>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
tuberosum]
Length = 267
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/55 (50%), Positives = 42/55 (76%)
Frame = -3
Query: 167 KKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
K+ I CAT+EEI+A + ++E KERMEK +E V+S++N +RTGRA+P +LD+
Sbjct: 67 KRSGIVRCATIEEIEAEKSSIEKDVKERMEKTVETVRSNFNSIRTGRASPAMLDK 121
>gb|EPS71455.1| hypothetical protein M569_03303, partial [Genlisea aurea]
Length = 195
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = -3
Query: 146 CATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
CAT+EEI+A + +E AKERMEK +E V+SS+N +RTGR+NP +LD+
Sbjct: 7 CATIEEIEAEKSLIEKDAKERMEKTIENVKSSFNSVRTGRSNPAILDK 54
>ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 2
[Solanum lycopersicum]
Length = 263
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/55 (50%), Positives = 42/55 (76%)
Frame = -3
Query: 167 KKRDISLCATLEEIKATRETVEGAAKERMEKALEAVQSSYNGLRTGRANPLLLDR 3
K+ I CAT+EEI+A + ++E KERMEK +E V+S++N +RTGRA+P +LD+
Sbjct: 67 KRSGIVRCATIEEIEAEKSSIEKDVKERMEKTVETVRSNFNSIRTGRASPAMLDK 121