BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003368
         (1191 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24418.1| unknown [Picea sitchensis] gi|224286491|gb|ACN409...   262   2e-67
ref|XP_001772435.1| predicted protein [Physcomitrella patens] gi...   256   1e-65
emb|CBI17917.3| unnamed protein product [Vitis vinifera]              244   5e-62
ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   244   5e-62
ref|XP_001761826.1| predicted protein [Physcomitrella patens] gi...   242   2e-61
gb|ABR16694.1| unknown [Picea sitchensis]                             239   2e-60
ref|XP_006453243.1| hypothetical protein CICLE_v10008200mg [Citr...   239   2e-60
gb|EXC31211.1| Poly(rC)-binding protein 3 [Morus notabilis]           233   2e-58
gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobro...   233   2e-58
ref|XP_004230074.1| PREDICTED: poly(rC)-binding protein 1-like [...   230   7e-58
ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [...   230   7e-58
ref|XP_006347721.1| PREDICTED: involucrin-like [Solanum tuberosum]    230   1e-57
gb|EOY29158.1| RNA-binding KH domain-containing protein [Theobro...   230   1e-57
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              226   1e-56
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   226   1e-56
ref|XP_002319087.2| hypothetical protein POPTR_0013s04030g [Popu...   226   2e-56
ref|XP_006382821.1| hypothetical protein POPTR_0005s05790g [Popu...   225   2e-56
ref|XP_006838834.1| hypothetical protein AMTR_s00002p00263460 [A...   225   2e-56
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   225   2e-56
ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...   225   3e-56

>gb|ABK24418.1| unknown [Picea sitchensis] gi|224286491|gb|ACN40952.1| unknown
           [Picea sitchensis]
          Length = 481

 Score =  262 bits (669), Expect = 2e-67
 Identities = 141/265 (53%), Positives = 187/265 (70%), Gaps = 6/265 (2%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA ++IG+QG+TIK+IQE +GA VRV  +++L FCA++DDR++E++GE   VH
Sbjct: 183 RLLVAGTQAGSLIGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVH 242

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAP-TAWSNAGAVPLSSTTQQSL 359
           +A+ELIV HLRK+LVDRSVLPLFE      N  Q     P  +W +  +  + S+    L
Sbjct: 243 KAVELIVSHLRKFLVDRSVLPLFEADRTIGNQPQIEENLPHQSWGHNQSSSVPSSGGAGL 302

Query: 360 GNN--LTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQI 533
           GN   ++S+++ D  YP  D   E+Q HH GLS+YG+DP   G   S+A P P PVITQ+
Sbjct: 303 GNTQYMSSAFQHDNYYPPSDLPLESQGHH-GLSVYGRDPSLAG--HSVANPPPAPVITQV 359

Query: 534 IQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQ 713
            Q MQIPLSYAD +IG+ G NISY+RR SGAT+ VQETRG PG++TVEI+GT +Q QTAQ
Sbjct: 360 TQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEMTVEIRGTATQVQTAQ 419

Query: 714 QLIQNFMSGAHKKTANSH---DTGY 779
           QLIQNFM+GA    AN++   D+GY
Sbjct: 420 QLIQNFMAGASGPPANTYSSVDSGY 444


>ref|XP_001772435.1| predicted protein [Physcomitrella patens]
           gi|162676232|gb|EDQ62717.1| predicted protein
           [Physcomitrella patens]
          Length = 375

 Score =  256 bits (654), Expect = 1e-65
 Identities = 140/254 (55%), Positives = 182/254 (71%), Gaps = 7/254 (2%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA ++IG+QG+TIKSIQ+T+GA+VRV P++EL  CA++DDR++E++G+P  V 
Sbjct: 109 RLLVAATQAGSLIGRQGATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQ 168

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQ--- 353
           RA+EL+V HLRK+LVDRSVLPLFE  N  AN   Q +T  + W        SST QQ   
Sbjct: 169 RAMELVVSHLRKFLVDRSVLPLFE-LNVMANQNNQQSTG-SQWQQP-----SSTQQQQPP 221

Query: 354 SLGNNLTSSYK-SDMVYPSRDPQQE---TQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPV 521
           S  +N ++ Y  +D+ + S+  QQ       HH G+S+YG+DP    L  S+APP P PV
Sbjct: 222 SYSSNDSTYYGGADISHHSQTQQQSHDLANQHHHGVSMYGRDPT---LGGSIAPPPPAPV 278

Query: 522 ITQIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQA 701
           ITQ+ Q MQIPLSYAD +IGS G NISY+RR SGAT+T+QETR  PG++TVEI G+ SQ 
Sbjct: 279 ITQVTQHMQIPLSYADAIIGSAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQV 338

Query: 702 QTAQQLIQNFMSGA 743
           QTAQQLIQNFM+GA
Sbjct: 339 QTAQQLIQNFMTGA 352


>emb|CBI17917.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  244 bits (623), Expect = 5e-62
 Identities = 137/254 (53%), Positives = 173/254 (68%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA N+IGKQGS IKSIQE+TGASVRV   DE+ F A +D+RI+E++GE LKV 
Sbjct: 73  RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQ 132

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +ALE +VGHLRK+LVD SVLPLFE+T    N T         W++     L  T+Q  +G
Sbjct: 133 KALEAVVGHLRKFLVDHSVLPLFERTY---NATISQDRQSDTWADKSL--LHGTSQTGMG 187

Query: 363 NNLTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQIIQQ 542
           ++ +   K + +Y  R    ETQ  H GL +YG++ G  G+RSS    A  P++TQI Q 
Sbjct: 188 SDYSLPAKRESLYLDR----ETQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQT 243

Query: 543 MQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQQLI 722
           MQIPLSYA+D+IG  G NI+YIRR SGA +TVQE+RG P +ITVEIKGT SQ QTAQQLI
Sbjct: 244 MQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLI 303

Query: 723 QNFMSGAHKKTANS 764
           Q F+S  HK+   S
Sbjct: 304 QEFISN-HKEPVPS 316


>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
           vinifera]
          Length = 466

 Score =  244 bits (623), Expect = 5e-62
 Identities = 137/254 (53%), Positives = 173/254 (68%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA N+IGKQGS IKSIQE+TGASVRV   DE+ F A +D+RI+E++GE LKV 
Sbjct: 175 RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQ 234

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +ALE +VGHLRK+LVD SVLPLFE+T    N T         W++     L  T+Q  +G
Sbjct: 235 KALEAVVGHLRKFLVDHSVLPLFERTY---NATISQDRQSDTWADKSL--LHGTSQTGMG 289

Query: 363 NNLTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQIIQQ 542
           ++ +   K + +Y  R    ETQ  H GL +YG++ G  G+RSS    A  P++TQI Q 
Sbjct: 290 SDYSLPAKRESLYLDR----ETQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQT 345

Query: 543 MQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQQLI 722
           MQIPLSYA+D+IG  G NI+YIRR SGA +TVQE+RG P +ITVEIKGT SQ QTAQQLI
Sbjct: 346 MQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLI 405

Query: 723 QNFMSGAHKKTANS 764
           Q F+S  HK+   S
Sbjct: 406 QEFISN-HKEPVPS 418


>ref|XP_001761826.1| predicted protein [Physcomitrella patens]
           gi|162686881|gb|EDQ73267.1| predicted protein
           [Physcomitrella patens]
          Length = 355

 Score =  242 bits (618), Expect = 2e-61
 Identities = 134/248 (54%), Positives = 172/248 (69%), Gaps = 7/248 (2%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPS-DELSFCAISDDRIIEIKGEPLKV 179
           R+L    QA ++IG+QG+TIKSIQ+++GA+VRV P+ +EL  CA++DDR++E+ GEP  V
Sbjct: 106 RLLVAATQAGSLIGRQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNV 165

Query: 180 HRALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSL 359
            RA EL+V HLRK+LVDRSVLPLFE     AN + Q +TA + W        SST QQ  
Sbjct: 166 QRATELVVAHLRKFLVDRSVLPLFELNRAVANQSNQQSTA-SQWQQP-----SSTQQQQP 219

Query: 360 GN---NLTSSYKSDMVYPSRDPQQETQ---SHHRGLSLYGKDPGPVGLRSSLAPPAPIPV 521
            N   N +S Y +  +     PQQ++    +HH GLSLYG+DP    L  ++ PP P PV
Sbjct: 220 PNYSSNDSSYYGAAELPHHSQPQQQSHDLANHHHGLSLYGRDPT---LGGTIVPPTPAPV 276

Query: 522 ITQIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQA 701
           ITQ+ Q MQIPLSYAD +IG  G NISY+RR SGAT+T+QETR  PG++TVEI G+ SQ 
Sbjct: 277 ITQVTQHMQIPLSYADAIIGGAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQV 336

Query: 702 QTAQQLIQ 725
           QTAQQLIQ
Sbjct: 337 QTAQQLIQ 344


>gb|ABR16694.1| unknown [Picea sitchensis]
          Length = 490

 Score =  239 bits (610), Expect = 2e-60
 Identities = 129/253 (50%), Positives = 176/253 (69%), Gaps = 6/253 (2%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L   +Q+ ++IGKQG+TIKSIQE +G + +V  S+++ +CA++DD+++EI+GEP  VH
Sbjct: 144 RLLLAGIQSGSLIGKQGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVH 203

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTA---PTAWSNAGAVPLSSTTQQ 353
           +ALEL+V HLRK+LVDRSVLP++E      N +Q        P + +   ++P S +   
Sbjct: 204 KALELVVSHLRKFLVDRSVLPMYEMNMSKTNQSQMEQNLSHQPWSHNQTSSLPNSGS--- 260

Query: 354 SLGNN---LTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVI 524
             GNN     ++   D  Y   D   ET SHH GL++YG+DP  +G   S+   AP PVI
Sbjct: 261 GFGNNSKYTPTAPPHDNYYAPSDLPPETHSHH-GLNMYGRDP--LG-GHSVPNAAPAPVI 316

Query: 525 TQIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQ 704
           TQ+ Q+MQIPLSYAD VIG++G NISY RR SGA +T++ETRG PG++TVEI GT SQ Q
Sbjct: 317 TQVSQRMQIPLSYADAVIGTNGANISYCRRNSGAIITIEETRGVPGEMTVEIHGTASQVQ 376

Query: 705 TAQQLIQNFMSGA 743
           TAQQLIQNFM+GA
Sbjct: 377 TAQQLIQNFMAGA 389


>ref|XP_006453243.1| hypothetical protein CICLE_v10008200mg [Citrus clementina]
           gi|568840641|ref|XP_006474274.1| PREDICTED:
           poly(rC)-binding protein 3-like [Citrus sinensis]
           gi|557556469|gb|ESR66483.1| hypothetical protein
           CICLE_v10008200mg [Citrus clementina]
          Length = 466

 Score =  239 bits (609), Expect = 2e-60
 Identities = 134/264 (50%), Positives = 178/264 (67%), Gaps = 5/264 (1%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L P  QA N+IGKQGS IKSIQE +GASVRV  SDE  F    D+RI+E++GE  KV 
Sbjct: 172 RLLVPSTQAINLIGKQGSLIKSIQENSGASVRVLSSDEAPFYVTEDERIVEMQGEAAKVL 231

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQT-NQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSL 359
           +ALE +VGHLRK+LVD+ VLPLFE+T N S +  +Q  T    W++  +  L + TQ ++
Sbjct: 232 KALEAVVGHLRKFLVDQGVLPLFEKTYNASISQERQVET----WADKSS--LHAATQSAI 285

Query: 360 GNNLTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQIIQ 539
               T S + + ++  R+PQ E++    G+S+YG+DP    +RSS    A  P++TQI Q
Sbjct: 286 STEYTPSTRRESLFLEREPQLESRYRLSGISIYGQDPALSTIRSSALGRASGPIVTQITQ 345

Query: 540 QMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQQL 719
            MQIP+SYA+D+IG  G +I  IRR SGA +TVQE+RG P +ITVEIKGT SQ Q AQQL
Sbjct: 346 TMQIPISYAEDIIGVGGTSIENIRRTSGAIITVQESRGLPDEITVEIKGTSSQVQLAQQL 405

Query: 720 IQNFMSGAHKKTANSH----DTGY 779
           IQ +M+  HK++  S     DTGY
Sbjct: 406 IQEYMNN-HKESITSSYGQIDTGY 428


>gb|EXC31211.1| Poly(rC)-binding protein 3 [Morus notabilis]
          Length = 474

 Score =  233 bits (593), Expect = 2e-58
 Identities = 129/254 (50%), Positives = 170/254 (66%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA N+IGKQGS IKSIQE+TGASVRV   DE+ F A +D+RI+E++GE LKV 
Sbjct: 178 RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLTGDEVPFYAAADERIVELQGEGLKVL 237

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +ALE ++GHLRK+LVD SV+PLFE+   S N T         W++     L ++TQ  +G
Sbjct: 238 KALEAVIGHLRKFLVDHSVIPLFEK---SYNSTISQERQVDTWADKSM--LQASTQTGVG 292

Query: 363 NNLTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQIIQQ 542
            N   + K +  +  R+ Q E Q    G+S+YG+D    G+R +    A  P++TQI Q 
Sbjct: 293 TNYPITAKREPYFLERETQLEPQLPSSGISMYGQDTSLPGIRPTGFGRAGAPIVTQIAQT 352

Query: 543 MQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQQLI 722
           MQIPLSYA+D+IG +G NI+YIRR SGA +TVQE+RG P +ITVEIKGT SQ Q AQQLI
Sbjct: 353 MQIPLSYAEDIIGIEGSNIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQLAQQLI 412

Query: 723 QNFMSGAHKKTANS 764
           Q  ++  HK+   S
Sbjct: 413 QEVINN-HKEPVPS 425


>gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 499

 Score =  233 bits (593), Expect = 2e-58
 Identities = 125/251 (49%), Positives = 168/251 (66%), Gaps = 4/251 (1%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L P  QA ++IGKQG+T+KSIQE++G  VRV  +++L   A+ DDR++E+ GE   VH
Sbjct: 198 RLLVPASQAGSLIGKQGTTVKSIQESSGCVVRVLGAEDLPVFALQDDRVVEVVGEAAGVH 257

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +A+ELI  HLRK+LVDRS++PLFE   Q +N          +W     VP +++     G
Sbjct: 258 KAVELIASHLRKFLVDRSIIPLFEMHMQMSNPQMDHMPPHQSWGPPQGVPPNASGGAGFG 317

Query: 363 NN---LTSSYKSDMVYPSRD-PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQ 530
           +N   +    + D  YP  D P    +  H+G+S YG++  P+G  +S  P +   +ITQ
Sbjct: 318 HNPQYMPPPRQLDNYYPPADMPPPIEKQPHQGISAYGRE-APMGAHASSNPQSAPSMITQ 376

Query: 531 IIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTA 710
           + QQMQIPLSYAD VIG+ G +ISYIRR SGATVT+QETRG PG++TVEI GT SQ QTA
Sbjct: 377 VTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTA 436

Query: 711 QQLIQNFMSGA 743
           QQLIQNFM+ A
Sbjct: 437 QQLIQNFMAEA 447


>ref|XP_004230074.1| PREDICTED: poly(rC)-binding protein 1-like [Solanum lycopersicum]
          Length = 504

 Score =  230 bits (587), Expect = 7e-58
 Identities = 131/269 (48%), Positives = 175/269 (65%), Gaps = 10/269 (3%)
 Frame = +3

Query: 3    RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
            ++L P  QA ++IGKQG+T+KSIQE +   VRV  +++L   A+ DDRI+E+ GEP+ VH
Sbjct: 201  KLLVPASQAGSLIGKQGTTVKSIQEASSCIVRVLGTEDLPMFALQDDRIVEVVGEPVGVH 260

Query: 183  RALELIVGHLRKYLVDRSVLPLFE-QTNQSANGTQQPTTAPTAWSNAG-AVPLSSTTQQS 356
            +A+ELI  HLRK+LVDR ++P+FE Q     N   +    P  W     A P S+     
Sbjct: 261  KAVELIASHLRKFLVDRGIIPVFEMQMQMPPNPPAEHMPPPQTWGPPPQAFPQSAAGGPG 320

Query: 357  LGNN---LTSSYKSDMVYPSRD--PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPV 521
             GN+   +  S + D  YP  D  P  E Q H +G+S YG++  P+ + SS   PA   +
Sbjct: 321  YGNSPHFMPPSRQHDNYYPPADMPPPMEKQPH-QGISAYGRE-APMSMHSSSNNPAAPSL 378

Query: 522  ITQIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQA 701
            ITQI QQMQIPL++AD VIG++G +ISYIRR+SGATVT+QET+G PG++TVEI GT SQ 
Sbjct: 379  ITQITQQMQIPLAFADAVIGTNGASISYIRRVSGATVTIQETKGVPGEMTVEINGTASQV 438

Query: 702  QTAQQLIQNFMSGA---HKKTANSHDTGY 779
            QTAQQLIQNFM+ A     +T    D GY
Sbjct: 439  QTAQQLIQNFMADAGAPQPQTGPPADQGY 467


>ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  230 bits (587), Expect = 7e-58
 Identities = 133/262 (50%), Positives = 176/262 (67%), Gaps = 4/262 (1%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA N+IGKQGS IKSIQE TGASVRV   DE+ F A +D+RI+E++GE +KV 
Sbjct: 140 RLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVL 199

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +ALE +VGHLRK+LVD SVLPLFE+T  +     Q   A T W +  +  L S +Q S+ 
Sbjct: 200 KALEAVVGHLRKFLVDNSVLPLFEKTYNAT--ISQERQADTTWVDKPS--LHSASQPSIV 255

Query: 363 NNLTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSS-LAPPAPIPVITQIIQ 539
            ++  S K D ++  R+ Q ++      +S+YG+D    GLRSS L+ P+  P++T +IQ
Sbjct: 256 TDIPLSTKRDSLFADRESQLDSLLPPSTMSMYGQDSSLSGLRSSALSRPSAPPIVTTVIQ 315

Query: 540 QMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQQL 719
            MQIPLSYA+D+IG  G NI YIRR SGA +TVQE+R  P +I VEIKGT SQ QTAQQL
Sbjct: 316 TMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESR-VPDEIIVEIKGTSSQVQTAQQL 374

Query: 720 IQNFMSGAHKKTANSH---DTG 776
           IQ  +S   +  A+++   DTG
Sbjct: 375 IQEVISNHTEPVASNYSRLDTG 396


>ref|XP_006347721.1| PREDICTED: involucrin-like [Solanum tuberosum]
          Length = 811

 Score =  230 bits (586), Expect = 1e-57
 Identities = 129/268 (48%), Positives = 174/268 (64%), Gaps = 9/268 (3%)
 Frame = +3

Query: 3    RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
            ++L P  QA ++IGKQG+T+KSIQE +   VRV  +++L   A+ DDRI+E+ GEP+ VH
Sbjct: 508  KLLVPASQAGSLIGKQGTTVKSIQEASSCIVRVLGTEDLPMFALQDDRIVEVVGEPVGVH 567

Query: 183  RALELIVGHLRKYLVDRSVLPLFE-QTNQSANGTQQPTTAPTAWSNAG-AVPLSSTTQQS 356
            +A+ELI  HLRK+LVDR ++P+FE Q     N   +    P  W     A P S+     
Sbjct: 568  KAVELIASHLRKFLVDRGIIPVFEMQMQMPPNPPVEHMPPPQTWGPPPQAFPQSAAGGPG 627

Query: 357  LGNN---LTSSYKSDMVYPSRD-PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVI 524
             GN+   +  S + D  YP  D P    +  H+G+S YG++  P+ + SS   PA   +I
Sbjct: 628  YGNSPHFMPPSRQHDNYYPPADMPPPMDKQPHQGISAYGRE-APMSMHSSSNNPAAPSLI 686

Query: 525  TQIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQ 704
            TQI QQMQIPL++AD VIG++G +ISYIRR+SGATVT+QET+G PG++TVEI GT SQ Q
Sbjct: 687  TQITQQMQIPLAFADAVIGTNGASISYIRRVSGATVTIQETKGVPGEMTVEINGTASQVQ 746

Query: 705  TAQQLIQNFMSGA---HKKTANSHDTGY 779
            TAQQLIQNFM+ A     +T    D GY
Sbjct: 747  TAQQLIQNFMADAGAPQPQTGPPADQGY 774


>gb|EOY29158.1| RNA-binding KH domain-containing protein [Theobroma cacao]
          Length = 474

 Score =  230 bits (586), Expect = 1e-57
 Identities = 131/254 (51%), Positives = 175/254 (68%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA N+IGKQGSTIKSIQE T ASVRV   DE+   A SD+RI+EI GE LKV 
Sbjct: 168 RLLVASSQAINLIGKQGSTIKSIQEATDASVRVLSEDEVPSYASSDERIVEIHGEALKVL 227

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +ALE ++G LRK+LVD+SV+P+FE+T  +    ++P  A T  S + ++  +S  Q  +G
Sbjct: 228 KALEAVLGQLRKFLVDQSVIPIFEKTYHAKISQERPVDAWTDRSQS-SLHSASAYQTGIG 286

Query: 363 NNLTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQIIQQ 542
           ++ + S K D +Y  R+   E +    GLSLYG+D G   +RSS    A  P++TQ++Q 
Sbjct: 287 SDYSLSLKRDPLY-DREAHLEPKIPASGLSLYGQDHGIGAIRSSGVSRAAAPIVTQMMQT 345

Query: 543 MQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQQLI 722
           MQ+PLSYA+D+IG  G NI+YIRR SGA +T+QE+ G P +ITVEIKGT SQ Q AQQLI
Sbjct: 346 MQVPLSYAEDIIGVGGSNIAYIRRASGAILTIQESGGLPDEITVEIKGTTSQVQMAQQLI 405

Query: 723 QNFMSGAHKKTANS 764
           Q F+S +HK+ A S
Sbjct: 406 QEFIS-SHKEPAPS 418


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  226 bits (577), Expect = 1e-56
 Identities = 128/267 (47%), Positives = 168/267 (62%), Gaps = 8/267 (2%)
 Frame = +3

Query: 3    RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
            R+L    QA ++IGKQG T+KSIQE +   VRV  +++L   A+ DDR++E+ GEP+ VH
Sbjct: 210  RLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVH 269

Query: 183  RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
            +A+ELI  HLRK+LVDRSV+PLFE   Q +N   +       W     +P +++     G
Sbjct: 270  KAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEHMPPHQPWGPPQGLPPNASGGPGFG 329

Query: 363  NN---LTSSYKSDMVYPSRD-PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQ 530
             N   +    + D  YP  + P    +  H+G+S YG++    G   S A PAP  +ITQ
Sbjct: 330  PNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAP-SMITQ 388

Query: 531  IIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTA 710
            + QQMQIPLSYAD VIG+ G +ISYIRR SGATVT+QETRG PG++TVEI GT SQ Q A
Sbjct: 389  VTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAA 448

Query: 711  QQLIQNFM----SGAHKKTANSHDTGY 779
            QQLIQNFM    + A  +   S D GY
Sbjct: 449  QQLIQNFMAEAAAPAQAQAGGSADQGY 475


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  226 bits (577), Expect = 1e-56
 Identities = 128/267 (47%), Positives = 168/267 (62%), Gaps = 8/267 (2%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA ++IGKQG T+KSIQE +   VRV  +++L   A+ DDR++E+ GEP+ VH
Sbjct: 141 RLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVH 200

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +A+ELI  HLRK+LVDRSV+PLFE   Q +N   +       W     +P +++     G
Sbjct: 201 KAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEHMPPHQPWGPPQGLPPNASGGPGFG 260

Query: 363 NN---LTSSYKSDMVYPSRD-PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVITQ 530
            N   +    + D  YP  + P    +  H+G+S YG++    G   S A PAP  +ITQ
Sbjct: 261 PNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAP-SMITQ 319

Query: 531 IIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTA 710
           + QQMQIPLSYAD VIG+ G +ISYIRR SGATVT+QETRG PG++TVEI GT SQ Q A
Sbjct: 320 VTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAA 379

Query: 711 QQLIQNFM----SGAHKKTANSHDTGY 779
           QQLIQNFM    + A  +   S D GY
Sbjct: 380 QQLIQNFMAEAAAPAQAQAGGSADQGY 406


>ref|XP_002319087.2| hypothetical protein POPTR_0013s04030g [Populus trichocarpa]
            gi|550324911|gb|EEE95010.2| hypothetical protein
            POPTR_0013s04030g [Populus trichocarpa]
          Length = 527

 Score =  226 bits (575), Expect = 2e-56
 Identities = 130/268 (48%), Positives = 169/268 (63%), Gaps = 9/268 (3%)
 Frame = +3

Query: 3    RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
            R+L P  QA ++IGKQG T+KSIQE +   VRV  +++L   A+ DDR++E+ GE   VH
Sbjct: 227  RLLVPASQAGSLIGKQGGTVKSIQEASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVH 286

Query: 183  RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
            +A+ELI  HLRK+LVDRS++PLFE   Q +N + +      +W     +P +       G
Sbjct: 287  KAVELIASHLRKFLVDRSIIPLFEMQMQMSNPSMEQMPPHQSWGPPQPLPPNHGGGPGYG 346

Query: 363  NN---LTSSYKSDMVYPSRD--PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVIT 527
             N   +    + D  YP  D  P  E Q H +G+S YG++  P+G  +S    A   +IT
Sbjct: 347  QNPQYMPPPRQLDDYYPPADMPPLMEKQPH-QGISAYGRE-APMGSHASSNAQAAPSMIT 404

Query: 528  QIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQT 707
            QI QQMQIPLSYAD VIG+ G +ISYIRR SGATVT+QETRG PG +TVEI GT SQ QT
Sbjct: 405  QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQT 464

Query: 708  AQQLIQNFM----SGAHKKTANSHDTGY 779
            AQQLIQNFM    + A  +T  + D GY
Sbjct: 465  AQQLIQNFMAEAGAPAQPQTGGAADQGY 492


>ref|XP_006382821.1| hypothetical protein POPTR_0005s05790g [Populus trichocarpa]
            gi|550338191|gb|ERP60618.1| hypothetical protein
            POPTR_0005s05790g [Populus trichocarpa]
          Length = 529

 Score =  225 bits (574), Expect = 2e-56
 Identities = 131/268 (48%), Positives = 167/268 (62%), Gaps = 9/268 (3%)
 Frame = +3

Query: 3    RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
            R+L P  QA ++IGKQG T+KSIQE +   VRV  +++L   ++ DDR++E+ GE + VH
Sbjct: 229  RLLVPASQAGSLIGKQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVH 288

Query: 183  RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
            +A+ELI   LRK+LVDRS++PLFE   Q AN   +      +W    ++PL+       G
Sbjct: 289  KAVELIASQLRKFLVDRSIIPLFEMQMQMANPPMEQMPPHQSWGGPQSLPLNPVGGPGYG 348

Query: 363  NN---LTSSYKSDMVYPSRD--PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVIT 527
             N   +    + D  YP  D  P  E Q H +G+S YG+     G  SS A  AP  +IT
Sbjct: 349  QNPQYMQPPRQHDNYYPPSDMPPPMEKQPH-QGISAYGRQTPMGGHASSNAQAAP-SMIT 406

Query: 528  QIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQT 707
            QI QQMQIPLSYAD VIG+ G +ISYIRR SGATVT+QETRG P  +TVEI GT SQ QT
Sbjct: 407  QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPEAMTVEISGTASQVQT 466

Query: 708  AQQLIQNFM----SGAHKKTANSHDTGY 779
            AQQLIQNFM    + A  +T    D GY
Sbjct: 467  AQQLIQNFMAEAGAPAQPQTGGPADQGY 494


>ref|XP_006838834.1| hypothetical protein AMTR_s00002p00263460 [Amborella trichopoda]
           gi|548841340|gb|ERN01403.1| hypothetical protein
           AMTR_s00002p00263460 [Amborella trichopoda]
          Length = 481

 Score =  225 bits (574), Expect = 2e-56
 Identities = 130/270 (48%), Positives = 172/270 (63%), Gaps = 10/270 (3%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA ++IG+QG+TIKSIQE +  +VRV  +++L  CA++DDR++EI+G+   VH
Sbjct: 161 RLLVAATQAGSLIGRQGTTIKSIQEGSNCTVRVLGAEDLPMCALADDRVVEIQGDSAGVH 220

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +A+ELI  HLRK+LVDRSVLPLFE  N   +  Q     P     AG  P S++   + G
Sbjct: 221 KAIELIATHLRKFLVDRSVLPLFEM-NIGMSNNQMEQHMPHM---AGGYPQSNSVPNAGG 276

Query: 363 NNLTSS-------YKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIP- 518
           +  +++        + D  YP  D     +  H GLS+YG+D           P A  P 
Sbjct: 277 SGFSANPQYMPPPRQHDNYYPPSDLPPMDKQRHPGLSVYGRDTS--------VPNAQAPA 328

Query: 519 VITQIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQ 698
           +ITQ+ Q MQIPLSYAD VIG+ G +ISYIRR SGAT+T+QETRG PG++TVEI G+ +Q
Sbjct: 329 IITQVTQHMQIPLSYADAVIGTAGASISYIRRASGATITIQETRGVPGEMTVEIHGSATQ 388

Query: 699 AQTAQQLIQNFMSGAHKKTANSH--DTGYA 782
            QTAQQLIQNFM+ A    AN H  D GYA
Sbjct: 389 VQTAQQLIQNFMAEAAAAPANIHGSDQGYA 418


>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 548

 Score =  225 bits (574), Expect = 2e-56
 Identities = 130/268 (48%), Positives = 169/268 (63%), Gaps = 9/268 (3%)
 Frame = +3

Query: 3    RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
            R+L P  QA ++IGKQG T+KSIQE +   VRV  +++L   A+ DDR++E+ G+   VH
Sbjct: 247  RLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVH 306

Query: 183  RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAP-TAWSNAGAVPLSSTTQQSL 359
            +A+ELI  HLRK+LVDRS++PLFE   Q  N        P  +W     +P ++      
Sbjct: 307  KAVELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGY 366

Query: 360  GNN--LTSSYKSDMVYPSRD--PQQETQSHHRGLSLYGKDPGPVGLRSSLAPPAPIPVIT 527
            GN   +    + +  YP  D  P  E Q H +G+S YG++  P+G+  S    A   +IT
Sbjct: 367  GNPQYMPPPRQIENYYPPADLPPPMEKQPH-QGISAYGRE-APMGVHGSSNSQAAPSMIT 424

Query: 528  QIIQQMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQT 707
            QI QQMQIPLSYAD VIG+ G +ISYIRR SGATVT+QETRG PG++TVEI GT SQ QT
Sbjct: 425  QITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQT 484

Query: 708  AQQLIQNFMSGA----HKKTANSHDTGY 779
            AQQLIQNFM+ A      +T  S D GY
Sbjct: 485  AQQLIQNFMAEAGAPTQAQTGGSTDQGY 512


>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  225 bits (573), Expect = 3e-56
 Identities = 132/262 (50%), Positives = 174/262 (66%), Gaps = 4/262 (1%)
 Frame = +3

Query: 3   RMLAPQVQASNIIGKQGSTIKSIQETTGASVRVQPSDELSFCAISDDRIIEIKGEPLKVH 182
           R+L    QA N+IGKQGS IKSIQE TGASVRV   DE+ F A +D+RI+E++GE +KV 
Sbjct: 140 RLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVL 199

Query: 183 RALELIVGHLRKYLVDRSVLPLFEQTNQSANGTQQPTTAPTAWSNAGAVPLSSTTQQSLG 362
           +ALE +VGHLRK+LVD SVLPLFE+T  +     Q   A T W +  +  L S +Q S+ 
Sbjct: 200 KALEAVVGHLRKFLVDNSVLPLFEKTYNAT--ISQEHQADTTWVDKPS--LHSASQPSIV 255

Query: 363 NNLTSSYKSDMVYPSRDPQQETQSHHRGLSLYGKDPGPVGLRSS-LAPPAPIPVITQIIQ 539
            +L  S K D ++  R+ Q ++      +S+YG+D    GLRSS L+ P+  P++T +IQ
Sbjct: 256 TDLPLSTKRDSLFADRESQLDSLLPPSTMSIYGQDSSLSGLRSSALSRPSAPPIVTTVIQ 315

Query: 540 QMQIPLSYADDVIGSDGRNISYIRRISGATVTVQETRGAPGDITVEIKGTESQAQTAQQL 719
            MQIPLSYA+D+IG  G NI YIR  SGA +TVQE+   P +I VEIKGT SQ QTAQQL
Sbjct: 316 TMQIPLSYAEDIIGIQGTNIEYIRCTSGAILTVQES-PVPDEIIVEIKGTSSQVQTAQQL 374

Query: 720 IQNFMSGAHKKTANSH---DTG 776
           IQ  +S   +  A+++   DTG
Sbjct: 375 IQEVISNHKEPLASNYSRLDTG 396