BLASTX nr result

ID: Ephedra26_contig00003287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003287
         (495 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22098.1| unknown [Picea sitchensis]                             112   5e-23
ref|XP_001756061.1| predicted protein [Physcomitrella patens] gi...    93   3e-17
ref|WP_017656125.1| hypothetical protein [Microchaete sp. PCC 7126]    55   1e-05
ref|YP_002374128.1| hypothetical protein PCC8801_4033 [Cyanothec...    55   1e-05

>gb|ABK22098.1| unknown [Picea sitchensis]
          Length = 140

 Score =  112 bits (280), Expect = 5e-23
 Identities = 69/144 (47%), Positives = 90/144 (62%), Gaps = 11/144 (7%)
 Frame = +2

Query: 95  MAATSAMLHTLPS-HTTAIAYR---------HTIPLS-HRSSTQQHKQLSLRRGTPYLIX 241
           MA   A+LH++PS H    A++         H IPL+   +   ++  LS RR T     
Sbjct: 1   MACAYAVLHSIPSQHKKLEAFQPFTGLRRGLHGIPLNPFWNIGGRNHMLSGRRATK---- 56

Query: 242 XXXXXLQRRAALPVISAIPVVGPITNFVTNPFVLSFLYLIGAIRFVSGFSKTTFSDTLLV 421
                +Q RA LPV+S IPVVGPI NFV +P +L  +Y+ GAIRF SGFS+T +SDTL  
Sbjct: 57  ----RVQTRAGLPVVSNIPVVGPILNFVISPTLLIAIYVFGAIRFQSGFSRTIYSDTLAN 112

Query: 422 RFGLAAIWPVLFVISKRFRENFKK 493
           R GL AIWPVLF++SK FRENF++
Sbjct: 113 RVGLTAIWPVLFLLSKAFRENFQR 136


>ref|XP_001756061.1| predicted protein [Physcomitrella patens]
           gi|162692571|gb|EDQ78927.1| predicted protein
           [Physcomitrella patens]
          Length = 151

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 41/76 (53%), Positives = 54/76 (71%)
 Frame = +2

Query: 266 RAALPVISAIPVVGPITNFVTNPFVLSFLYLIGAIRFVSGFSKTTFSDTLLVRFGLAAIW 445
           RA LPVIS++PV+GP+ N V NP +L  +Y  GA RF SGF KTT++D    +  + A+W
Sbjct: 73  RAGLPVISSVPVLGPLANAVFNPVLLFIVYAAGAFRFYSGFKKTTYADNSATKISMTALW 132

Query: 446 PVLFVISKRFRENFKK 493
           PVLF+ SK +R NFKK
Sbjct: 133 PVLFIASKAYRNNFKK 148


>ref|WP_017656125.1| hypothetical protein [Microchaete sp. PCC 7126]
          Length = 62

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = +2

Query: 350 LYLIGAIRFVSGFSKTTFSDTLLVRFGLAAIWPVLFVISKRFRENFKK 493
           LY  GA +F  GF +T FS TL  R GL+ +WP LF+I+K +R NF+K
Sbjct: 11  LYGYGAWKFWYGFERTNFSQTLPNRIGLSLLWPALFIINKSYRRNFQK 58


>ref|YP_002374128.1| hypothetical protein PCC8801_4033 [Cyanothece sp. PCC 8801]
           gi|257061815|ref|YP_003139703.1| hypothetical protein
           Cyan8802_4071 [Cyanothece sp. PCC 8802]
           gi|501594793|ref|WP_012597226.1| hypothetical protein
           [Cyanothece] gi|218169235|gb|ACK67972.1| conserved
           hypothetical protein [Cyanothece sp. PCC 8801]
           gi|256591981|gb|ACV02868.1| conserved hypothetical
           protein [Cyanothece sp. PCC 8802]
          Length = 65

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/54 (40%), Positives = 37/54 (68%)
 Frame = +2

Query: 332 PFVLSFLYLIGAIRFVSGFSKTTFSDTLLVRFGLAAIWPVLFVISKRFRENFKK 493
           PF++  +YL G  +FV G++ T FS  L  +  L+ +WPVLF+++  +R+NF+K
Sbjct: 6   PFIILVIYLAGVWKFVQGYNLTNFSRQLPTKLILSLLWPVLFIVNGSYRQNFQK 59


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