BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003280
         (1173 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   512   e-142
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li...   510   e-142
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr...   510   e-142
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li...   507   e-141
ref|XP_002988235.1| hypothetical protein SELMODRAFT_235493 [Sela...   506   e-141
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li...   506   e-141
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...   506   e-141
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li...   504   e-140
ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [A...   504   e-140
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li...   501   e-139
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   501   e-139
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g...   500   e-139
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi...   499   e-139
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              499   e-139
ref|XP_002302226.1| replication factor C 36 kDA family protein [...   499   e-138
ref|XP_001771105.1| predicted protein [Physcomitrella patens] gi...   499   e-138
ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutr...   498   e-138
ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-li...   497   e-138
ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-li...   496   e-138
gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus...   496   e-138

>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  512 bits (1319), Expect = e-142
 Identities = 254/362 (70%), Positives = 306/362 (84%)
 Frame = +1

Query: 64   EETVAMETDEGYVDQQRINLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDII 243
            E    M+ DE    +    L+  KGK+ ++   P  +  PWVEKYRPQSL DVAAHRDI+
Sbjct: 3    EAVTVMDIDE----EDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIV 58

Query: 244  DTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVR 423
            DTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG+Q+ NM+LELNASDDRGIDVVR
Sbjct: 59   DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVR 118

Query: 424  QQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVN 603
            QQIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+VN
Sbjct: 119  QQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN 178

Query: 604  KIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNI 783
            KIIPALQSRCTRFRFAPL+A HV +RL+ VI  E+L+V++ G++A+ RL  GDMRKALNI
Sbjct: 179  KIIPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNI 238

Query: 784  LQSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLD 963
            LQST M+S ++ EE VYL TGNPLPKDIEQI YWLLNESFA ++  ISE+K +KG+AL+D
Sbjct: 239  LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVD 298

Query: 964  IIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAA 1143
            ++R++ +F+F+I MP++VR+QLIN LADIEYRL+FG N+KLQLGSLI++FT  R ALVAA
Sbjct: 299  VVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAA 358

Query: 1144 AK 1149
            AK
Sbjct: 359  AK 360


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
          Length = 364

 Score =  510 bits (1314), Expect = e-142
 Identities = 256/363 (70%), Positives = 307/363 (84%), Gaps = 2/363 (0%)
 Frame = +1

Query: 67   ETVA-METDEGYVDQQRINLENRKGKAKLIA-EDPSLRRGPWVEKYRPQSLQDVAAHRDI 240
            ETV+ M+ DE   D+ +       GK  +++   P ++  PWVEKYRPQSL DVAAHRDI
Sbjct: 5    ETVSLMDIDE---DENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61

Query: 241  IDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVV 420
            +DTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVV
Sbjct: 62   VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121

Query: 421  RQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYV 600
            RQQIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN V
Sbjct: 122  RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181

Query: 601  NKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALN 780
            NKIIPALQSRCTRFRFAPL   HV +RL+ VI+ E L+VT+ G++A+ RLC GDMRKALN
Sbjct: 182  NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALN 241

Query: 781  ILQSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALL 960
            ILQST M+S ++ EE VYL TGNPLPKDIEQI YWLLNESFA++++ ISEMK +KG+AL+
Sbjct: 242  ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALV 301

Query: 961  DIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVA 1140
            DI+R++ +F+F+I MP++VR++L+N LADIEYRL+FG N+KLQLGS+IS FT  R A+VA
Sbjct: 302  DIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVA 361

Query: 1141 AAK 1149
            AAK
Sbjct: 362  AAK 364


>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
            gi|557536359|gb|ESR47477.1| hypothetical protein
            CICLE_v10001597mg [Citrus clementina]
          Length = 364

 Score =  510 bits (1313), Expect = e-142
 Identities = 254/362 (70%), Positives = 305/362 (84%), Gaps = 1/362 (0%)
 Frame = +1

Query: 67   ETVA-METDEGYVDQQRINLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDII 243
            ETV+ M+ DE   + Q +  ++      +    P ++  PWVEKYRPQSL DVAAHRDI+
Sbjct: 5    ETVSLMDFDED--ENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIV 62

Query: 244  DTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVR 423
            DTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVVR
Sbjct: 63   DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 122

Query: 424  QQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVN 603
            QQIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN VN
Sbjct: 123  QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVN 182

Query: 604  KIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNI 783
            KIIPALQSRCTRFRFAPL   HV +RL+ VI+ E L+VT+ G++A+ RLC GDMRKALNI
Sbjct: 183  KIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNI 242

Query: 784  LQSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLD 963
            LQST M+S ++ EE VYL TGNPLPKDIEQI YWLLNESFA++++ ISEMK +KG+AL+D
Sbjct: 243  LQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVD 302

Query: 964  IIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAA 1143
            I+R++ +F+F+I MP++VR++L+N LADIEYRL+FG N+KLQLGS+IS FT  R A+VAA
Sbjct: 303  IVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAA 362

Query: 1144 AK 1149
            AK
Sbjct: 363  AK 364


>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 363

 Score =  507 bits (1305), Expect = e-141
 Identities = 251/340 (73%), Positives = 299/340 (87%), Gaps = 2/340 (0%)
 Frame = +1

Query: 133  KGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPP 306
            K K+ ++A +P+   +  PWVEKYRP SL DVAAHRDI+DTIDRLT EN+LPHLLLYGPP
Sbjct: 23   KAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPP 82

Query: 307  GTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVK 486
            GTGKTST+LAVARKLYG QYQNM+LELNASDDRGIDVVRQQIQDFAS+QSLSFG K +VK
Sbjct: 83   GTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSVK 142

Query: 487  LVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAG 666
            LVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKIIPALQSRCTRFRFAPL+A 
Sbjct: 143  LVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAV 202

Query: 667  HVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATG 846
            HV +RL+ VI+ E L+V D G++A+ RL  GDMRKALNILQST M+S ++ EETVYL TG
Sbjct: 203  HVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEETVYLCTG 262

Query: 847  NPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQ 1026
            NPLPKDIEQI YWLLNE FA++++ I EMKT+KG+AL+DI+R++ LF+F+I MP+ VR+Q
Sbjct: 263  NPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALVDIVREVTLFVFKIKMPSAVRVQ 322

Query: 1027 LINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            L+N LADIEYRL+FG N+KLQLGS+I++F+  R ALVAAA
Sbjct: 323  LMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALVAAA 362


>ref|XP_002988235.1| hypothetical protein SELMODRAFT_235493 [Selaginella moellendorffii]
            gi|302819400|ref|XP_002991370.1| hypothetical protein
            SELMODRAFT_236274 [Selaginella moellendorffii]
            gi|300140763|gb|EFJ07482.1| hypothetical protein
            SELMODRAFT_236274 [Selaginella moellendorffii]
            gi|300143967|gb|EFJ10654.1| hypothetical protein
            SELMODRAFT_235493 [Selaginella moellendorffii]
          Length = 332

 Score =  506 bits (1304), Expect = e-141
 Identities = 249/326 (76%), Positives = 284/326 (87%)
 Frame = +1

Query: 172  RRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKL 351
            R GPWVEKYRP SL DVAAH+DIIDTIDRLT ENKLPHLLLYGPPGTGKTST+LAVARKL
Sbjct: 7    RSGPWVEKYRPASLADVAAHKDIIDTIDRLTAENKLPHLLLYGPPGTGKTSTILAVARKL 66

Query: 352  YGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQ 531
            YG Q+QNM+LELNASDDRGIDVVRQQIQDFAS+QS+SFG K NVKL++LDEADAMTKDAQ
Sbjct: 67   YGPQFQNMILELNASDDRGIDVVRQQIQDFASTQSISFGEKANVKLIILDEADAMTKDAQ 126

Query: 532  FSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERL 711
            FSLRR+IEKYTK TRFCL+CNYV+KIIPALQSRCTRFRF PL A HV++RL FVI +ERL
Sbjct: 127  FSLRRIIEKYTKNTRFCLICNYVSKIIPALQSRCTRFRFPPLQAQHVRERLEFVIDQERL 186

Query: 712  NVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLL 891
            +VT+DG+SAI RL  GDMRKALNILQSTQM+ P V E  VY  TGNP PK+IEQI  WLL
Sbjct: 187  DVTEDGLSAIVRLSNGDMRKALNILQSTQMAEPHVTEAAVYSCTGNPTPKEIEQIASWLL 246

Query: 892  NESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFG 1071
            NESF +AY  I ++KT KG+AL+D++R++  FIF I+MP  +R+ LIN LADIEYRL  G
Sbjct: 247  NESFQSAYSNIVQLKTSKGLALVDVVRELQPFIFTISMPGNIRVPLINCLADIEYRLASG 306

Query: 1072 TNEKLQLGSLISAFTHTRQALVAAAK 1149
             NEKLQLG+L+SAFTHTR ALV+AA+
Sbjct: 307  PNEKLQLGALVSAFTHTRVALVSAAR 332


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 361

 Score =  506 bits (1303), Expect = e-141
 Identities = 254/360 (70%), Positives = 301/360 (83%), Gaps = 2/360 (0%)
 Frame = +1

Query: 73   VAMETDEGYVDQQRINLENRKGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRDIID 246
            +A  T    +D         KGK+ + A +P    +  PWVEKYRPQSL DVAAHRDI+D
Sbjct: 1    MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60

Query: 247  TIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQ 426
            TIDRLT EN+LPHLLLYGPPGTGKTST+LAVARKLYG QYQNM+LELNASDDRGIDVVRQ
Sbjct: 61   TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQ 120

Query: 427  QIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNK 606
            QIQDFAS+QSLSFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNK
Sbjct: 121  QIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 180

Query: 607  IIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNIL 786
            IIPALQSRCTRFRFAPL+A HV +RL+ VI+ E L+V D G++A  RL  GDMRKALNIL
Sbjct: 181  IIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNIL 240

Query: 787  QSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDI 966
            QST M+S ++ EE VYL TGNPLPKDIE I YWLLNE FA++++ I EMKT+KG+AL+DI
Sbjct: 241  QSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDI 300

Query: 967  IRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            +R++ +F+F+I MP+ VR+QL+N LADIEYRL+FG N+KLQLGS+I++FT  R ALVAAA
Sbjct: 301  VREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 360


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
            gi|355491087|gb|AES72290.1| Replication factor C subunit
            [Medicago truncatula]
          Length = 355

 Score =  506 bits (1302), Expect = e-141
 Identities = 254/363 (69%), Positives = 302/363 (83%), Gaps = 2/363 (0%)
 Frame = +1

Query: 64   EETVAMETDEGYVDQQRINLENRKGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRD 237
            EET AM+ D              KGK  + A +PS   +   WVEKYRPQSL DVAAHRD
Sbjct: 3    EETYAMDIDV-----------TDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRD 51

Query: 238  IIDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDV 417
            I+DTIDRLT EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDV
Sbjct: 52   IVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDV 111

Query: 418  VRQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNY 597
            VRQQIQDFAS+QSLSFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+
Sbjct: 112  VRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNH 171

Query: 598  VNKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKAL 777
            VNKIIPALQSRCTRFRFAPL+A HV +RL+ VI  ERL+V D G+SA+ RL  GDMRKAL
Sbjct: 172  VNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKAL 231

Query: 778  NILQSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMAL 957
            NILQST M+S ++ EE VYL TGNPLPKDIEQI YWLLNE ++ +++ I +MKT+KG+AL
Sbjct: 232  NILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLAL 291

Query: 958  LDIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALV 1137
            +DI+R++ +F+F+I MP+ VR+QL+N LADIEYRL+FG N+KLQLGS++++FT  R A+V
Sbjct: 292  IDIVREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMV 351

Query: 1138 AAA 1146
            AAA
Sbjct: 352  AAA 354


>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
            gi|449499057|ref|XP_004160708.1| PREDICTED: replication
            factor C subunit 5-like [Cucumis sativus]
          Length = 363

 Score =  504 bits (1299), Expect = e-140
 Identities = 250/354 (70%), Positives = 300/354 (84%), Gaps = 4/354 (1%)
 Frame = +1

Query: 100  VDQQRINLENRKG-KAKLIAEDPSLRRG---PWVEKYRPQSLQDVAAHRDIIDTIDRLTN 267
            +D    N E  K  K K +A   +   G   PWVEK+RP+SL DVAAHRDI+DTID+LT+
Sbjct: 10   IDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTS 69

Query: 268  ENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFAS 447
            EN+LPHLLLYGPPGTGKTST+LAVARKLYG  Y NM+LELNASDDRGIDVVRQQIQDFAS
Sbjct: 70   ENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVVRQQIQDFAS 129

Query: 448  SQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQS 627
            +QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+VNKIIPALQS
Sbjct: 130  TQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQS 189

Query: 628  RCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSS 807
            RCTRFRFAPL+  HV +RLR+VI+ ERL+VT+ G++A+ RLC GDMRKALNILQST M+S
Sbjct: 190  RCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALNILQSTHMAS 249

Query: 808  PRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLF 987
              + EE VYL TGNP+PKDIEQI +WLLNE F+++++ ISE+KT+KG+AL+DI+R++ LF
Sbjct: 250  QHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALVDIVREVTLF 309

Query: 988  IFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 1149
            +F+I MP+ +R+QLIN LADIEYR+TFG N+KLQLGSLIS+FT  R ALV AA+
Sbjct: 310  VFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVGAAQ 363


>ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
            gi|548860608|gb|ERN18175.1| hypothetical protein
            AMTR_s00054p00174840 [Amborella trichopoda]
          Length = 359

 Score =  504 bits (1298), Expect = e-140
 Identities = 250/339 (73%), Positives = 294/339 (86%), Gaps = 1/339 (0%)
 Frame = +1

Query: 136  GKAKLIAEDPSLRRG-PWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 312
            GK K++  +  L +  PWVEKYRPQSL DVAAH+DIIDT+DRLTNEN+LPHLLLYGPPGT
Sbjct: 21   GKGKVVEREQLLPKATPWVEKYRPQSLADVAAHKDIIDTVDRLTNENRLPHLLLYGPPGT 80

Query: 313  GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 492
            GKTSTVLAVARKLYG   +NM+LELNASDDRGIDVVRQQIQDFAS+QS SFG K +VKLV
Sbjct: 81   GKTSTVLAVARKLYGGNLRNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKSSVKLV 140

Query: 493  LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 672
            LLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKIIPALQSRCTRFRFAPL+A HV
Sbjct: 141  LLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAAHV 200

Query: 673  QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 852
            ++RL++VI+ E L+V + G+SA+ RL  GDMRKALNILQST M+S  V E+ VYL TGNP
Sbjct: 201  RERLQYVIKAEGLDVDESGLSAVVRLSNGDMRKALNILQSTHMASQHVSEKAVYLCTGNP 260

Query: 853  LPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 1032
            +PKD+EQI  WLLNE FA +Y+YIS+MKT KG+AL+DI+R++ +FIF I MP+ VR+QLI
Sbjct: 261  MPKDVEQISNWLLNEDFATSYKYISDMKTTKGLALVDIVREVTMFIFMIKMPSTVRVQLI 320

Query: 1033 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 1149
            N LADIEYRL+FG N+KLQLGSLI +FTH R A+ AAAK
Sbjct: 321  NDLADIEYRLSFGCNDKLQLGSLIGSFTHVRCAMEAAAK 359


>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
            arietinum]
          Length = 363

 Score =  501 bits (1290), Expect = e-139
 Identities = 248/340 (72%), Positives = 296/340 (87%), Gaps = 2/340 (0%)
 Frame = +1

Query: 133  KGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPP 306
            KGK  + A +PS+  +   WVEKYRPQSL DVAAHRDI+DTIDRLT EN+LPHLLLYGPP
Sbjct: 23   KGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPP 82

Query: 307  GTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVK 486
            GTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVVRQQIQDFAS+QSLSFG K +VK
Sbjct: 83   GTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSVK 142

Query: 487  LVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAG 666
            L+LLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKII ALQSRCTRFRFAPL+A 
Sbjct: 143  LILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQALQSRCTRFRFAPLDAV 202

Query: 667  HVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATG 846
            HV +RL+ VI+ E L+V D G+SA+ RL  GDMRKALNILQST M+S ++ EE VYL TG
Sbjct: 203  HVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTG 262

Query: 847  NPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQ 1026
            NPLPKDIEQI YWLLNE ++++Y+ I ++KT+KG+AL+DI+R++ +F+F+I MPA VR+Q
Sbjct: 263  NPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVREVTMFVFKIKMPAAVRVQ 322

Query: 1027 LINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            L+N LADIEYRL+FG N+KLQLGS+I++FT  R ALVAAA
Sbjct: 323  LVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 362


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540562|gb|EEF42129.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 360

 Score =  501 bits (1290), Expect = e-139
 Identities = 251/357 (70%), Positives = 300/357 (84%)
 Frame = +1

Query: 79   METDEGYVDQQRINLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDR 258
            M+ DE   ++Q    +  KGK   +      +  PWVEKYRPQSL DVAAHRDI+DTIDR
Sbjct: 8    MDIDEDVKEKQNQLSKPNKGKNVFV----DTKATPWVEKYRPQSLADVAAHRDIVDTIDR 63

Query: 259  LTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQD 438
            LTNEN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVVRQQIQD
Sbjct: 64   LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVVRQQIQD 123

Query: 439  FASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPA 618
            FAS+QS SF  K  VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+VNKIIPA
Sbjct: 124  FASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPA 183

Query: 619  LQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQ 798
            LQSRCTRFRFAPL+  HV DRL+ VI+ E L+V + G++A+ RL  GDMRKALNILQST 
Sbjct: 184  LQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALNILQSTH 243

Query: 799  MSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDI 978
            M+S ++ EE V+L TGNPLPKDI+QI YWLLNESFA +++ ISE+KTKKG+AL+DI+R++
Sbjct: 244  MASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALVDIVREV 303

Query: 979  PLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 1149
             +F+F+I MP++VR+QLIN +ADIEYRL+FG ++KLQLGSL+++FT  R ALVAAAK
Sbjct: 304  TMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFTWARSALVAAAK 360


>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
            gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
            Full=Replication factor C subunit 3; Short=OsRFC3;
            AltName: Full=Activator 1 subunit 3
            gi|46805779|dbj|BAD17147.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|46806135|dbj|BAD17365.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
            Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218191668|gb|EEC74095.1| hypothetical protein
            OsI_09136 [Oryza sativa Indica Group]
          Length = 361

 Score =  500 bits (1288), Expect = e-139
 Identities = 247/338 (73%), Positives = 296/338 (87%)
 Frame = +1

Query: 133  KGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 312
            KGKA L +  P  R  PWVEKYRPQSL DVAAHRDI+DTIDRLTNEN+LPHLLLYGPPGT
Sbjct: 24   KGKAPL-SSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 82

Query: 313  GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 492
            GKTST+LAVARKLYG QY NM+LELNASD+RGIDVVRQQIQDFAS++SLSFG K +VK+V
Sbjct: 83   GKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFASARSLSFGAKQSVKMV 142

Query: 493  LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 672
            LLDEADAMTKDAQF+LRRVIEK+T++TRF L+CN+VNKIIPALQSRCTRFRFAPL+  HV
Sbjct: 143  LLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHV 202

Query: 673  QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 852
            ++RL+ +IQ E L+V D G++A+ RL  GDMRKALNILQST M+S ++ EE VYL TGNP
Sbjct: 203  RERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQITEEAVYLCTGNP 262

Query: 853  LPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 1032
            +PKDIEQI YWLLNESF+ +++ IS+MK +KG+AL+DIIR++ +F+F+I MP++VRI+LI
Sbjct: 263  MPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLI 322

Query: 1033 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            N LADIEYRL+F  N+KLQLG+LIS FT  R A+VAAA
Sbjct: 323  NDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360


>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi|194696262|gb|ACF82215.1|
            unknown [Zea mays] gi|413939151|gb|AFW73702.1|
            replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  499 bits (1286), Expect = e-139
 Identities = 245/338 (72%), Positives = 295/338 (87%)
 Frame = +1

Query: 133  KGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 312
            KGKA L A     R  PWVEKYRPQSL DVAAHRDI+DTIDRLTNEN+LPHLLLYGPPGT
Sbjct: 27   KGKAPLSAGG---RAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 83

Query: 313  GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 492
            GKTST+LAVARKLYG QY NM+LELNASD+RGIDVVRQQIQDFA ++SLSFG + +VKLV
Sbjct: 84   GKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFAGARSLSFGARPSVKLV 143

Query: 493  LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 672
            LLDEADAMTKDAQF+LRRVIEKYT++TRF L+CN+VNKIIPALQSRCTRFRFAPL+  HV
Sbjct: 144  LLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSHV 203

Query: 673  QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 852
            ++RL+ +I+ E L+V D G++A+ RL  GDMRKALNILQST M+S ++ EE VYL TGNP
Sbjct: 204  RERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNP 263

Query: 853  LPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 1032
            +PKDIEQI +WLLNE F+ +++YIS+MK +KG+AL+DIIR++ +F+F+I MP++VR++LI
Sbjct: 264  MPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLI 323

Query: 1033 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            N LADIEYRL+F  N+KLQLG+LIS FT TR A+VAAA
Sbjct: 324  NDLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  499 bits (1285), Expect = e-139
 Identities = 245/338 (72%), Positives = 295/338 (87%)
 Frame = +1

Query: 133  KGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGT 312
            KGKA L A     R  PWVEKYRPQSL DVAAHRDI+DTIDRLTNEN+LPHLLLYGPPGT
Sbjct: 27   KGKALLSAGG---RAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGT 83

Query: 313  GKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNVKLV 492
            GKTST+LAVARKLYG QY NM+LELNASD+RGIDVVRQQIQDFA ++SLSFG + +VKLV
Sbjct: 84   GKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFAGARSLSFGARPSVKLV 143

Query: 493  LLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNAGHV 672
            LLDEADAMTKDAQF+LRRVIEKYT++TRF L+CN+VNKIIPALQSRCTRFRFAPL+  HV
Sbjct: 144  LLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGSHV 203

Query: 673  QDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLATGNP 852
            ++RL+ +I+ E L+V D G++A+ RL  GDMRKALNILQST M+S ++ EE VYL TGNP
Sbjct: 204  RERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNP 263

Query: 853  LPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRIQLI 1032
            +PKDIEQI +WLLNE F+ +++YIS+MK +KG+AL+DIIR++ +F+F+I MP++VR++LI
Sbjct: 264  MPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRVKLI 323

Query: 1033 NALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            N LADIEYRL+F  N+KLQLG+LIS FT TR A+VAAA
Sbjct: 324  NNLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361


>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
            gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
            family protein [Populus trichocarpa]
          Length = 363

 Score =  499 bits (1284), Expect = e-138
 Identities = 248/362 (68%), Positives = 302/362 (83%)
 Frame = +1

Query: 61   MEETVAMETDEGYVDQQRINLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDI 240
            M E +A+   +   +Q  ++  N+  K  + A  P  +  PWVEKYRPQSL DVAAHRDI
Sbjct: 1    MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60

Query: 241  IDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVV 420
            IDTIDRLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVV
Sbjct: 61   IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120

Query: 421  RQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYV 600
            R+QIQDFAS+QS SFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK TRF L+CN+V
Sbjct: 121  RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 601  NKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALN 780
            NKIIPALQSRCTRFRFAPL+  HV +RL+ VI+ E L+V + G+ A+  L  GDMRKALN
Sbjct: 181  NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240

Query: 781  ILQSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALL 960
            ILQST M+S ++ EETVYL TGNPLP+D++QI +WLLNESFA +Y+ ISE+KT+KG+AL+
Sbjct: 241  ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300

Query: 961  DIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVA 1140
            DI+R++ +F+F+I M +++R+ LIN LADIEYRL+FG N+KLQLGSLI++FT  R ALVA
Sbjct: 301  DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA 360

Query: 1141 AA 1146
            AA
Sbjct: 361  AA 362


>ref|XP_001771105.1| predicted protein [Physcomitrella patens] gi|162677638|gb|EDQ64106.1|
            predicted protein [Physcomitrella patens]
          Length = 365

 Score =  499 bits (1284), Expect = e-138
 Identities = 248/353 (70%), Positives = 298/353 (84%), Gaps = 12/353 (3%)
 Frame = +1

Query: 127  NRKGKAKL-IAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGP 303
            ++KGK K+ +     ++ GPWVEKYRP SL DVAAH+DIIDTIDRLT EN+LPHLLLYGP
Sbjct: 13   SQKGKGKVDLNNGRQVKGGPWVEKYRPTSLADVAAHKDIIDTIDRLTGENRLPHLLLYGP 72

Query: 304  PGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFGTKLNV 483
            PGTGKTST+LAVARKLYG QYQNM+LELNASDDRGI+VVRQQIQDFAS++S+SFG K+NV
Sbjct: 73   PGTGKTSTILAVARKLYGAQYQNMILELNASDDRGIEVVRQQIQDFASTKSISFGPKVNV 132

Query: 484  KLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNA 663
            KLV+LDEADAMTKDAQF+LRRVIEKYTK+TRFCL+CNY +KIIPALQSRCTRFRFAPL+ 
Sbjct: 133  KLVILDEADAMTKDAQFALRRVIEKYTKSTRFCLICNYASKIIPALQSRCTRFRFAPLDP 192

Query: 664  GHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLAT 843
             +V +RLR+VIQ+E L+VTD G++AI RL  GD+RKALNILQS QM+SP + EE VYL T
Sbjct: 193  ANVTERLRYVIQQEGLDVTDGGLAAIVRLANGDLRKALNILQSAQMASPHLTEEAVYLCT 252

Query: 844  GNPLPKDIEQICYWLLNESFANAYRY-----------ISEMKTKKGMALLDIIRDIPLFI 990
            GNP+PKDIEQI YWLLNE F+ +++            I++MKT KG+AL+D+ R++  F+
Sbjct: 253  GNPMPKDIEQIAYWLLNEPFSTSFQSILNNLIKLFHDITKMKTSKGLALVDVARELQPFV 312

Query: 991  FRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAAK 1149
            F I MP  VR+QLI+ALAD+EYRL FGTNEKLQLG+L+ AFT  R ALVAAA+
Sbjct: 313  FTINMPPTVRVQLIDALADVEYRLAFGTNEKLQLGALLGAFTRARTALVAAAR 365


>ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutrema salsugineum]
            gi|557086521|gb|ESQ27373.1| hypothetical protein
            EUTSA_v10018756mg [Eutrema salsugineum]
          Length = 361

 Score =  498 bits (1282), Expect = e-138
 Identities = 254/361 (70%), Positives = 301/361 (83%), Gaps = 1/361 (0%)
 Frame = +1

Query: 70   TVAMETDEGYVDQQRINLENRKGKAKL-IAEDPSLRRGPWVEKYRPQSLQDVAAHRDIID 246
            T AM+ D   VD+      + KGK        P  +  PWVEKYRPQSL DVAAHRDIID
Sbjct: 5    TSAMDID---VDENHSRKPSNKGKDIAGFGGPPQSKATPWVEKYRPQSLDDVAAHRDIID 61

Query: 247  TIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQ 426
            TIDRLTNENKLPHLLLYGPPGTGKTST+LAVARKLYG +Y+NM+LELNASDDRGIDVVRQ
Sbjct: 62   TIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVRQ 121

Query: 427  QIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNK 606
            QIQDFAS+QS S G K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+ N+VNK
Sbjct: 122  QIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNK 180

Query: 607  IIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNIL 786
            IIPALQSRCTRFRFAPL+  HV  RL+ VI+ E L+V++ G++A+ RL  GDMRKA+NIL
Sbjct: 181  IIPALQSRCTRFRFAPLDPVHVSQRLKHVIEAEGLDVSESGLAALVRLSNGDMRKAMNIL 240

Query: 787  QSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDI 966
            QST M+S ++ EE VYL TGNPLP DIEQI +WLLNE FA +Y+ ISEMKT+KG+A++DI
Sbjct: 241  QSTNMASEKITEEEVYLCTGNPLPMDIEQISHWLLNEPFAESYKNISEMKTRKGLAIVDI 300

Query: 967  IRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            +R++ +F+F+I+MP+ VR+QLIN LADIEYRL+FG N+KLQLG++IS FTH R ALVAAA
Sbjct: 301  VREVTMFVFKISMPSNVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFTHARSALVAAA 360

Query: 1147 K 1149
            K
Sbjct: 361  K 361


>ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-like [Solanum lycopersicum]
          Length = 357

 Score =  497 bits (1280), Expect = e-138
 Identities = 249/364 (68%), Positives = 301/364 (82%), Gaps = 1/364 (0%)
 Frame = +1

Query: 61   MEETVA-METDEGYVDQQRINLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRD 237
            M ET++ M+ D+  +D        +  K K I  +   +  PWVEK+RPQSL DVAAHRD
Sbjct: 1    MAETISSMDIDDDKID-------TKPSKGKNIVSNTEPKSVPWVEKFRPQSLSDVAAHRD 53

Query: 238  IIDTIDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDV 417
            I++TIDRL + N+LPHLLLYGPPGTGKTST+LA+ARKLYG Q QNM+LELNASDDRGIDV
Sbjct: 54   IVETIDRLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMQNMVLELNASDDRGIDV 113

Query: 418  VRQQIQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNY 597
            VRQQIQDFAS+QS+SFG K  VKLVLLDEADAMTKDAQF+LRRVIE+YT+ TRF L+CN 
Sbjct: 114  VRQQIQDFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIERYTRNTRFALICNN 173

Query: 598  VNKIIPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKAL 777
            VNK+IPALQSRCTRFRFAPL+A HV +RL+ V++ E+L+V + G+ A+ RL  GDMRKAL
Sbjct: 174  VNKVIPALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKAL 233

Query: 778  NILQSTQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMAL 957
            NILQST M+S ++ E+ VYL TGNPLPKDIEQI YWLLNE FA + + ISE+KT+KG+AL
Sbjct: 234  NILQSTHMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLAL 293

Query: 958  LDIIRDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALV 1137
            +DI+R++ +F+F+I MPA VR+QLIN +ADIEYRLTFG N+KLQLGSLISAFT  R ALV
Sbjct: 294  VDIVREVTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALV 353

Query: 1138 AAAK 1149
            AAAK
Sbjct: 354  AAAK 357


>ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-like isoform X2 [Cicer
            arietinum]
          Length = 364

 Score =  496 bits (1278), Expect = e-138
 Identities = 248/341 (72%), Positives = 296/341 (86%), Gaps = 3/341 (0%)
 Frame = +1

Query: 133  KGKAKLIAEDPSL--RRGPWVEKYRPQSLQDVAAHRDIIDTIDRLTNENKLPHLLLYGPP 306
            KGK  + A +PS+  +   WVEKYRPQSL DVAAHRDI+DTIDRLT EN+LPHLLLYGPP
Sbjct: 23   KGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPP 82

Query: 307  GTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQIQDFASSQSLSFG-TKLNV 483
            GTGKTST+LAVARKLYG QY NM+LELNASDDRGIDVVRQQIQDFAS+QSLSFG  K +V
Sbjct: 83   GTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGFVKPSV 142

Query: 484  KLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKIIPALQSRCTRFRFAPLNA 663
            KL+LLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKII ALQSRCTRFRFAPL+A
Sbjct: 143  KLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQALQSRCTRFRFAPLDA 202

Query: 664  GHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQSTQMSSPRVDEETVYLAT 843
             HV +RL+ VI+ E L+V D G+SA+ RL  GDMRKALNILQST M+S ++ EE VYL T
Sbjct: 203  VHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCT 262

Query: 844  GNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDIIRDIPLFIFRITMPAEVRI 1023
            GNPLPKDIEQI YWLLNE ++++Y+ I ++KT+KG+AL+DI+R++ +F+F+I MPA VR+
Sbjct: 263  GNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVREVTMFVFKIKMPAAVRV 322

Query: 1024 QLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            QL+N LADIEYRL+FG N+KLQLGS+I++FT  R ALVAAA
Sbjct: 323  QLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 363


>gb|ESW09418.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
          Length = 359

 Score =  496 bits (1277), Expect = e-138
 Identities = 250/359 (69%), Positives = 300/359 (83%)
 Frame = +1

Query: 70   TVAMETDEGYVDQQRINLENRKGKAKLIAEDPSLRRGPWVEKYRPQSLQDVAAHRDIIDT 249
            T  ME D    D      E   G   L A D ++   PWVEKYRPQSL DVAAHRDI+DT
Sbjct: 3    THPMEIDSDGDDHTHSAGECVIGSEDLPAFDKAI---PWVEKYRPQSLDDVAAHRDIVDT 59

Query: 250  IDRLTNENKLPHLLLYGPPGTGKTSTVLAVARKLYGQQYQNMMLELNASDDRGIDVVRQQ 429
            ID+LT EN+LPHLLLYGPPGTGKTST+LAVARKLYG +++NM+LELNASDDRGIDVVRQQ
Sbjct: 60   IDKLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQ 119

Query: 430  IQDFASSQSLSFGTKLNVKLVLLDEADAMTKDAQFSLRRVIEKYTKTTRFCLVCNYVNKI 609
            IQDFAS+QSLSFG K +VKLVLLDEADAMTKDAQF+LRRVIEKYTK+TRF L+CN+VNKI
Sbjct: 120  IQDFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKI 179

Query: 610  IPALQSRCTRFRFAPLNAGHVQDRLRFVIQEERLNVTDDGISAIARLCCGDMRKALNILQ 789
            IPALQSRCTRFRFAPL+A HV +R++ VI+ E L+V DDG+ A+ RL  GDMRKALNILQ
Sbjct: 180  IPALQSRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNILQ 239

Query: 790  STQMSSPRVDEETVYLATGNPLPKDIEQICYWLLNESFANAYRYISEMKTKKGMALLDII 969
            ST M++ ++ EE +YL TGNPLPKDIEQI YWLLNE + ++++ I EMKT+KG+AL+DII
Sbjct: 240  STHMATQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDII 299

Query: 970  RDIPLFIFRITMPAEVRIQLINALADIEYRLTFGTNEKLQLGSLISAFTHTRQALVAAA 1146
            R++ +F+F+I MP+ VR+QL+N LADIEYRL+FG N+KLQLGS+I++FT  R ALVAAA
Sbjct: 300  REVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 358