BLASTX nr result

ID: Ephedra26_contig00003170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003170
         (967 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16154.1| unknown [Picea sitchensis]                             100   1e-18

>gb|ABR16154.1| unknown [Picea sitchensis]
          Length = 565

 Score =  100 bits (248), Expect = 1e-18
 Identities = 91/270 (33%), Positives = 128/270 (47%), Gaps = 29/270 (10%)
 Frame = +2

Query: 236 MSRSRKVENWWHREG---DYHNCHDSPTSIAYQKPTALEGGSDDPVVMTCTKGASYHSGG 406
           M  S+K +  WH E     +H      T+IA Q     +  S+ P        +S+    
Sbjct: 1   MMSSQKADRLWHGESAIEPHHAVQAVSTTIASQISNTSK--SEGPTF--AKDNSSFQR-- 54

Query: 407 LIPQSVAXXXXXXXXXXXX----AFSHMRERGSMPSLPPCS--FPNPNPVVDPTHQVSST 568
           L+PQ+V+                 FS       + S P  S   P  + VV+P + +SST
Sbjct: 55  LVPQAVSSDSPEPVDSGQENPFPRFSLSSSSKKLNSSPMSSNIIPALSNVVNPEN-ISST 113

Query: 569 SSTFCTNLHFSHPSTT----AAALPFLPHPTK-----------QSCLSQSLFSGDYMRQP 703
           SSTFCT+LHFS  S +       LPFLPHP++           QS  SQSLFSGDYM+  
Sbjct: 114 SSTFCTDLHFSPSSISQHHPPGILPFLPHPSECSLRASVMPPSQSAFSQSLFSGDYMK-- 171

Query: 704 PQGYHDSSHSAPSSFEEIFTMFDGGVSEGSQHSHPVLPDNAIPNQCNARKEEWPEWVDPL 883
            Q Y D+    P   ++IF  F    SE SQ +      + I  Q +   +EW +W + L
Sbjct: 172 -QSYGDTHTGDP--LQDIFN-FPDVASECSQRNQGA-TSSGIVGQGHTEPDEWQDWPEQL 226

Query: 884 GSDDDA----WNNIL-VDAGDDPALNTLPP 958
            SDDD+    W ++L V++G+DP LNT+ P
Sbjct: 227 PSDDDSLVANWTDLLVVESGEDPGLNTIYP 256


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