BLASTX nr result
ID: Ephedra26_contig00003050
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00003050
(625 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [A... 335 5e-90
emb|CBI28783.3| unnamed protein product [Vitis vinifera] 332 4e-89
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 332 4e-89
ref|XP_001773330.1| predicted protein [Physcomitrella patens] gi... 329 4e-88
ref|XP_004296769.1| PREDICTED: DNA topoisomerase 1-like [Fragari... 326 3e-87
ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutr... 325 6e-87
ref|XP_006279572.1| hypothetical protein CARUB_v10025842mg [Caps... 324 1e-86
ref|XP_001773082.1| predicted protein [Physcomitrella patens] gi... 324 1e-86
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 323 2e-86
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 322 4e-86
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 322 5e-86
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ... 321 1e-85
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr... 320 3e-85
ref|NP_200342.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]... 318 6e-85
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The... 318 6e-85
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca... 318 6e-85
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca... 318 6e-85
ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Caps... 318 6e-85
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b... 317 2e-84
ref|XP_002866086.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata] ... 317 2e-84
>ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda]
gi|548860061|gb|ERN17669.1| hypothetical protein
AMTR_s00059p00193620 [Amborella trichopoda]
Length = 884
Score = 335 bits (860), Expect = 5e-90
Identities = 162/202 (80%), Positives = 182/202 (90%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKEI+HDNTVTWLA+WNDPINPKE KYVFLAASS+LKG SDKEKYEKAR+LK+YI+ IR+
Sbjct: 537 WKEIKHDNTVTWLAFWNDPINPKELKYVFLAASSSLKGQSDKEKYEKARLLKDYIDSIRE 596
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F SKD K+Q A+ATYLID+LALRAGNEKDDDEADTVGCCTLKVENV L+ SS+
Sbjct: 597 TYTKHFNSKDIMKRQTAIATYLIDRLALRAGNEKDDDEADTVGCCTLKVENVTLLPLSSL 656
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V P VYKAIG+F+ K++ DDLFD+LDTSKLN HLKELMPGLT
Sbjct: 657 QFDFLGKDSIRYFNTVEVLPPVYKAIGDFRSGKKEGDDLFDKLDTSKLNAHLKELMPGLT 716
Query: 543 AKVFRTYNASITLDRLLQETEG 608
AKVFRTYNAS TLDRLLQ+T G
Sbjct: 717 AKVFRTYNASETLDRLLQDTTG 738
>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 332 bits (852), Expect = 4e-89
Identities = 163/205 (79%), Positives = 183/205 (89%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR+LK+YI++IR
Sbjct: 363 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRA 422
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENVALV P+ +
Sbjct: 423 TYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKL 482
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRYFNTV V+ VYKAIG+FK K DDLFD+LDTSKLN HLKELMPGLT
Sbjct: 483 EFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLT 542
Query: 543 AKVFRTYNASITLDRLL-QETEGVD 614
AKVFRTYNASITLD +L +E G D
Sbjct: 543 AKVFRTYNASITLDEMLNREARGGD 567
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 332 bits (852), Expect = 4e-89
Identities = 163/205 (79%), Positives = 183/205 (89%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR+LK+YI++IR
Sbjct: 522 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRA 581
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENVALV P+ +
Sbjct: 582 TYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKL 641
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRYFNTV V+ VYKAIG+FK K DDLFD+LDTSKLN HLKELMPGLT
Sbjct: 642 EFDFLGKDSIRYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLT 701
Query: 543 AKVFRTYNASITLDRLL-QETEGVD 614
AKVFRTYNASITLD +L +E G D
Sbjct: 702 AKVFRTYNASITLDEMLNREARGGD 726
>ref|XP_001773330.1| predicted protein [Physcomitrella patens]
gi|162675372|gb|EDQ61868.1| predicted protein
[Physcomitrella patens]
Length = 632
Score = 329 bits (843), Expect = 4e-88
Identities = 159/202 (78%), Positives = 179/202 (88%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKEIRHDNTVTWLAYW DPIN KEFKYVFLAASS+LKG SD +KYEKARMLK+YI+DIR+
Sbjct: 272 WKEIRHDNTVTWLAYWKDPINDKEFKYVFLAASSSLKGQSDMQKYEKARMLKDYIDDIRR 331
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F S D TK+QIAVATYLID+LALRAGNEKD+DEADTVGCC+LKVE+V LV P S+
Sbjct: 332 TYTHDFSSSDPTKQQIAVATYLIDRLALRAGNEKDEDEADTVGCCSLKVEHVTLVAPKSL 391
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V VYKAIG+FKK K++ DDLF+ LDT+KLN HLK +MP LT
Sbjct: 392 QFDFLGKDSIRYFNTVEVDERVYKAIGQFKKGKKEGDDLFERLDTTKLNLHLKGIMPSLT 451
Query: 543 AKVFRTYNASITLDRLLQETEG 608
AKVFRTYNASITLD LLQ+T G
Sbjct: 452 AKVFRTYNASITLDNLLQDTTG 473
>ref|XP_004296769.1| PREDICTED: DNA topoisomerase 1-like [Fragaria vesca subsp. vesca]
Length = 838
Score = 326 bits (836), Expect = 3e-87
Identities = 161/206 (78%), Positives = 181/206 (87%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK YI DIR
Sbjct: 477 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKEYIGDIRA 536
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F S+D K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV + P+S+
Sbjct: 537 AYTKDFTSRDAAKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIPPNSL 596
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+F+FLGKDSIRY NTV V+P VYK I +F++ K+DSDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 597 EFNFLGKDSIRYENTVEVEPAVYKEIKKFQEGKKDSDDLFDKLDTSKLNAHLKELMPGLT 656
Query: 543 AKVFRTYNASITLD-RLLQETEGVDI 617
AKVFRTYNASITLD L QET D+
Sbjct: 657 AKVFRTYNASITLDNELNQETTEGDV 682
>ref|XP_006401468.1| hypothetical protein EUTSA_v10012622mg [Eutrema salsugineum]
gi|567179002|ref|XP_006401469.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
gi|557102558|gb|ESQ42921.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
gi|557102559|gb|ESQ42922.1| hypothetical protein
EUTSA_v10012622mg [Eutrema salsugineum]
Length = 904
Score = 325 bits (833), Expect = 6e-87
Identities = 158/208 (75%), Positives = 183/208 (87%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASSALKGLSDKEKYEKAR LK++I IR
Sbjct: 543 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARKLKDHIGHIRA 602
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 603 AYTKDFSNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVDCIPPNKL 662
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLN HLKELMPGLT
Sbjct: 663 KFDFLGKDSIQYVNTVEVEPPVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMPGLT 722
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD++L +ET ++P+
Sbjct: 723 AKVFRTYNASITLDQMLSKETRDGEVPE 750
>ref|XP_006279572.1| hypothetical protein CARUB_v10025842mg [Capsella rubella]
gi|482548276|gb|EOA12470.1| hypothetical protein
CARUB_v10025842mg [Capsella rubella]
Length = 923
Score = 324 bits (830), Expect = 1e-86
Identities = 159/208 (76%), Positives = 183/208 (87%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINP+EFKYVFLAASSALKGLSDKEKYEKAR L ++I++IR
Sbjct: 557 WKEVKHDNTVTWLAFWNDPINPREFKYVFLAASSALKGLSDKEKYEKARNLSDHIDNIRT 616
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ NF +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ I
Sbjct: 617 TYTKNFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKI 676
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFD LDTSKLN HLKEL+PGLT
Sbjct: 677 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDMLDTSKLNAHLKELVPGLT 736
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L QET+ D+ Q
Sbjct: 737 AKVFRTYNASITLDEMLSQETKDGDVNQ 764
>ref|XP_001773082.1| predicted protein [Physcomitrella patens]
gi|162675629|gb|EDQ62122.1| predicted protein
[Physcomitrella patens]
Length = 502
Score = 324 bits (830), Expect = 1e-86
Identities = 156/202 (77%), Positives = 178/202 (88%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLAYW DPIN KEFKYVFLAASS+LKG SD KYEKAR LK+YI++IR+
Sbjct: 142 WKEVRHDNTVTWLAYWKDPINDKEFKYVFLAASSSLKGQSDMLKYEKARTLKDYIDNIRR 201
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F S D TK+QIAVATYLID+LALRAGNEKD+DEADTVGCC+LKVE+V+L+ P S+
Sbjct: 202 TYTKDFSSSDPTKQQIAVATYLIDRLALRAGNEKDEDEADTVGCCSLKVEHVSLIAPKSL 261
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V VYKAIG+FKK K+ DDLF+ LDT+KLN HLK +MPGLT
Sbjct: 262 QFDFLGKDSIRYFNTVEVDERVYKAIGQFKKGKKGGDDLFERLDTTKLNLHLKGIMPGLT 321
Query: 543 AKVFRTYNASITLDRLLQETEG 608
AKVFRTYNASITLD LLQ+T G
Sbjct: 322 AKVFRTYNASITLDTLLQDTRG 343
>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product
[Vitis vinifera]
Length = 857
Score = 323 bits (829), Expect = 2e-86
Identities = 162/208 (77%), Positives = 182/208 (87%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LKNYI+DIR
Sbjct: 497 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKDIRA 556
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F SKD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV P+S+
Sbjct: 557 TYTKDFVSKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVIPEPPNSL 616
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRY TV V+ VYKAI +F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 617 QFDFLGKDSIRYEKTVEVELPVYKAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMPGLT 676
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L ++T+ D+ Q
Sbjct: 677 AKVFRTYNASITLDEMLNKDTKEGDVAQ 704
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 322 bits (826), Expect = 4e-86
Identities = 158/208 (75%), Positives = 180/208 (86%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LK+YI +IR
Sbjct: 516 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRA 575
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F SKD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 576 AYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKL 635
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRY NTV V+ VYKAIG F+ K+ +DDLFD LDTSKLN HLKELMPGLT
Sbjct: 636 KFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQTDDLFDSLDTSKLNAHLKELMPGLT 695
Query: 543 AKVFRTYNASITLD-RLLQETEGVDIPQ 623
AKVFRTYNASITLD +L +ETE D+ +
Sbjct: 696 AKVFRTYNASITLDEKLYEETEDGDVAE 723
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 322 bits (825), Expect = 5e-86
Identities = 160/208 (76%), Positives = 180/208 (86%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE+RHDNTVTWLA+WNDPINPKEFKYVFLAASS LKGLSDKEKYEKAR+LK+YI+ IR
Sbjct: 547 WKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRA 606
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F SKD TKKQIAVATYLID+LALRAGNEKDDDEADTVGCCTLKVENV V P+ +
Sbjct: 607 AYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNIL 666
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRY N V V+ V+KAI +F+ K S DLFD LDTSKLN HLKELMPGLT
Sbjct: 667 KFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLT 726
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L +ET+G D+ +
Sbjct: 727 AKVFRTYNASITLDDMLSRETKGGDVAE 754
>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
putative [Ricinus communis]
Length = 891
Score = 321 bits (822), Expect = 1e-85
Identities = 160/209 (76%), Positives = 182/209 (87%), Gaps = 2/209 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LK+YI +IR
Sbjct: 529 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRA 588
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPS-S 359
Y + SKD TKKQIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + S +
Sbjct: 589 AYQKDLRSKDITKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPGSFN 648
Query: 360 IQFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGL 539
++FDFLGKDSIRY NTV VKPEVY+AIG F+K K+ +DDLFD+LDT+KLN HLKELMPGL
Sbjct: 649 LKFDFLGKDSIRYENTVEVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELMPGL 708
Query: 540 TAKVFRTYNASITLD-RLLQETEGVDIPQ 623
TAKVFRTYNASITLD +L +ETE D+ +
Sbjct: 709 TAKVFRTYNASITLDEKLYEETEDGDVAE 737
>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222860420|gb|EEE97967.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 860
Score = 320 bits (819), Expect = 3e-85
Identities = 157/208 (75%), Positives = 180/208 (86%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR LK+YI +IR
Sbjct: 499 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRT 558
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F SKD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 559 AYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKL 618
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSIRY NTV V+ VYKAI +F+ K+ +DDLFD LDTSKLN HLKELMPGLT
Sbjct: 619 KFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFDSLDTSKLNAHLKELMPGLT 678
Query: 543 AKVFRTYNASITLD-RLLQETEGVDIPQ 623
AKVFRTYNASITLD +L +ETE D+ +
Sbjct: 679 AKVFRTYNASITLDEKLYEETEDGDVAE 706
>ref|NP_200342.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]
gi|9758163|dbj|BAB08548.1| DNA topoisomerase I
[Arabidopsis thaliana] gi|110741973|dbj|BAE98926.1| DNA
topoisomerase I like protein [Arabidopsis thaliana]
gi|332009232|gb|AED96615.1| DNA topoisomerase 1 beta
[Arabidopsis thaliana]
Length = 917
Score = 318 bits (816), Expect = 6e-85
Identities = 156/208 (75%), Positives = 180/208 (86%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+W+DPINPKEFKYVFLAASS+LKG SDKEKYEKAR L N+I IR
Sbjct: 550 WKEVKHDNTVTWLAFWSDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRA 609
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 610 AYTKDFNNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 669
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLNTHLKELM GLT
Sbjct: 670 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLT 729
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L +ET D+P+
Sbjct: 730 AKVFRTYNASITLDLMLSKETRDGDVPE 757
>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
Length = 733
Score = 318 bits (816), Expect = 6e-85
Identities = 156/208 (75%), Positives = 182/208 (87%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK+YI++IR
Sbjct: 416 WKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRA 475
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 476 AYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 535
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+ VYKAIG+F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 536 KFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLT 595
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L +ET+ D+ +
Sbjct: 596 AKVFRTYNASITLDEMLNKETKDGDVAE 623
>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
isoform 3 [Theobroma cacao]
Length = 836
Score = 318 bits (816), Expect = 6e-85
Identities = 156/208 (75%), Positives = 182/208 (87%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK+YI++IR
Sbjct: 543 WKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRA 602
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 603 AYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 662
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+ VYKAIG+F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 663 KFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLT 722
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L +ET+ D+ +
Sbjct: 723 AKVFRTYNASITLDEMLNKETKDGDVAE 750
>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao]
Length = 904
Score = 318 bits (816), Expect = 6e-85
Identities = 156/208 (75%), Positives = 182/208 (87%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WK+I+HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKARMLK+YI++IR
Sbjct: 543 WKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRA 602
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD K+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 603 AYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 662
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+ VYKAIG+F+ K SDDLFD+LDTSKLN HLKELMPGLT
Sbjct: 663 KFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLT 722
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L +ET+ D+ +
Sbjct: 723 AKVFRTYNASITLDEMLNKETKDGDVAE 750
>ref|XP_006279978.1| hypothetical protein CARUB_v10025848mg [Capsella rubella]
gi|482548682|gb|EOA12876.1| hypothetical protein
CARUB_v10025848mg [Capsella rubella]
Length = 915
Score = 318 bits (816), Expect = 6e-85
Identities = 156/208 (75%), Positives = 179/208 (86%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKG SDKEKYEKAR L N+I IR
Sbjct: 548 WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRA 607
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
Y+ +F +KD TK+QIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ +
Sbjct: 608 AYTKDFNNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL 667
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLN HLKELM GLT
Sbjct: 668 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKADDLFDELDTSKLNAHLKELMAGLT 727
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L +ET D+P+
Sbjct: 728 AKVFRTYNASITLDLMLSKETRDGDVPE 755
>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
Length = 911
Score = 317 bits (812), Expect = 2e-84
Identities = 155/202 (76%), Positives = 180/202 (89%), Gaps = 1/202 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+WNDPI+ K+FKYVFLAASSALKG SDKEKYEK+R LK++I IR
Sbjct: 550 WKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYEKSRKLKHHIHKIRD 609
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ +F SKDKTKKQIAVATYLID+LALRAGNEKDDDEA+TVGCCTLKV+NV V P+++
Sbjct: 610 TYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDDDEAETVGCCTLKVDNVTCVPPNNL 669
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
QFDFLGKDSIRYFNTV V+ VYKAI EF+ K+ DDLFD+LDT++LN HLK+LMPGLT
Sbjct: 670 QFDFLGKDSIRYFNTVEVELPVYKAIEEFRAGKKPGDDLFDKLDTTRLNAHLKDLMPGLT 729
Query: 543 AKVFRTYNASITLDRLL-QETE 605
AKVFRTYNASITLD +L +ETE
Sbjct: 730 AKVFRTYNASITLDDILHKETE 751
>ref|XP_002866086.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata]
gi|297311921|gb|EFH42345.1| TOP1BETA [Arabidopsis lyrata
subsp. lyrata]
Length = 922
Score = 317 bits (811), Expect = 2e-84
Identities = 157/208 (75%), Positives = 180/208 (86%), Gaps = 1/208 (0%)
Frame = +3
Query: 3 WKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSALKGLSDKEKYEKARMLKNYIEDIRK 182
WKE++HDNTVTWLA+W DPIN KEFKYVFLA SSA+KGLSDKEKYEKAR L ++I++IR
Sbjct: 556 WKEVKHDNTVTWLAFWVDPINQKEFKYVFLAPSSAMKGLSDKEKYEKARNLTDHIDNIRT 615
Query: 183 TYSMNFGSKDKTKKQIAVATYLIDQLALRAGNEKDDDEADTVGCCTLKVENVALVEPSSI 362
TY+ NF +KD T KQIAVATYLID+LALRAGNEKDDDEADTVGCCTLKV NV + P+ I
Sbjct: 616 TYTKNFTAKDVTTKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKI 675
Query: 363 QFDFLGKDSIRYFNTVVVKPEVYKAIGEFKKEKRDSDDLFDELDTSKLNTHLKELMPGLT 542
+FDFLGKDSI+Y NTV V+P VYKAIG+F+ K +DDLFDELDTSKLN HLKEL+PGLT
Sbjct: 676 KFDFLGKDSIQYVNTVEVEPLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLT 735
Query: 543 AKVFRTYNASITLDRLL-QETEGVDIPQ 623
AKVFRTYNASITLD +L QET+ D+ Q
Sbjct: 736 AKVFRTYNASITLDEMLSQETKDGDLNQ 763