BLASTX nr result
ID: Ephedra26_contig00003021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00003021
(1477 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006844587.1| hypothetical protein AMTR_s00016p00206840 [A... 461 e-127
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [... 439 e-120
gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis] 437 e-120
ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Popu... 437 e-120
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul... 437 e-120
ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [... 437 e-120
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i... 437 e-120
sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase ... 434 e-119
ref|XP_004952569.1| PREDICTED: RNA pseudouridine synthase 7-like... 433 e-119
gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indi... 433 e-119
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [... 433 e-118
ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Gly... 432 e-118
emb|CBI15710.3| unnamed protein product [Vitis vinifera] 431 e-118
gb|ESW09863.1| hypothetical protein PHAVU_009G162600g [Phaseolus... 430 e-118
ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citr... 429 e-117
dbj|BAJ99439.1| predicted protein [Hordeum vulgare subsp. vulgare] 428 e-117
ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like... 427 e-117
ref|NP_001136977.1| uncharacterized protein LOC100217137 [Zea ma... 427 e-117
ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [... 424 e-116
ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [... 421 e-115
>ref|XP_006844587.1| hypothetical protein AMTR_s00016p00206840 [Amborella trichopoda]
gi|548847058|gb|ERN06262.1| hypothetical protein
AMTR_s00016p00206840 [Amborella trichopoda]
Length = 425
Score = 461 bits (1185), Expect = e-127
Identities = 228/417 (54%), Positives = 291/417 (69%), Gaps = 2/417 (0%)
Frame = -1
Query: 1246 NMGFPSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFR 1067
+ FP VWE+P+NPPKP+DY+F DG RLV+PY+FEFI++VK RW GK + DL+ HEFR
Sbjct: 37 SQNFPMDVVWESPENPPKPEDYIFRDGMRLVKPYYFEFISHVKSRWVGKTIVDLFTHEFR 96
Query: 1066 KRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDV 887
+R EY++ AV GRI+VD+++V Y+V ++QK+SHFVHRHEPPV+A V++L G DV
Sbjct: 97 QRPQEYYLAAVNAGRIQVDDQMVHVSYVVQSSQKISHFVHRHEPPVMAWGVSILEKGTDV 156
Query: 886 VTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADK 707
VT+CKPASVPVHPCGQYRKNTV+GILEAE +APLFP+HRLDRLVSGLLI A+++ AD+
Sbjct: 157 VTVCKPASVPVHPCGQYRKNTVVGILEAERDIAPLFPVHRLDRLVSGLLILARSAAAADR 216
Query: 706 FREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPT-MGKN 530
FR++I AGKV+KEYIAKV+G+FPE+E V+ANV YDAREG+S+ E + + + T GK
Sbjct: 217 FRKQIEAGKVKKEYIAKVLGVFPEEEQVVDANVDYDAREGKSSVELWDGDHCNRTRKGKV 276
Query: 529 ASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKT- 353
ASTRF R STNGI SIVKC P+TGRTHQIRVHLQYLG+PI ND LY + + + +T
Sbjct: 277 ASTRFTRISTNGIQSIVKCEPLTGRTHQIRVHLQYLGYPIGNDALYLSETVSLRSAKRTC 336
Query: 352 DDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNES 173
D + + + EA +H + + S E++ PK+
Sbjct: 337 ADRATTTTVTEDCEASGSVEDHQISEKLTESGEMH----------PKED----------- 375
Query: 172 SYAVSSLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
F +DP+CTNCPNL+P GYD HEEGLWLHC RYSGPNWT
Sbjct: 376 -------------------FRIDPMCTNCPNLAPHGYDGHEEGLWLHCVRYSGPNWT 413
>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
pseudourine synthase 7-like [Cucumis sativus]
Length = 393
Score = 439 bits (1129), Expect = e-120
Identities = 219/420 (52%), Positives = 280/420 (66%), Gaps = 1/420 (0%)
Frame = -1
Query: 1261 EEDNKNMGFP-SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDL 1085
EE++ MG G VW+ P NPP+ DY+F +G+R VRPY+FEFIA+VK RW+GK + DL
Sbjct: 8 EEESMRMGMGMGGIVWQTPDNPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTIVDL 67
Query: 1084 YAHEFRKRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVL 905
+A EF+ R YEY+V+AV GRI+VD ++V YIV ++QK+SHF+HRHEPPV+A V VL
Sbjct: 68 FAEEFKGRPYEYYVDAVECGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGVKVL 127
Query: 904 HNGNDVVTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKN 725
+V+T+CKPASVPVHPCGQYRKNTV+GILEAEHGLAPLFPIHRLDRLVSGLLI A+N
Sbjct: 128 KEEEEVLTVCKPASVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARN 187
Query: 724 SYTADKFREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSP 545
+ AD FR++I +G V+K+YIA+VVG+FPE+E V+AN+ Y+ REGRSTAE V+ S D+
Sbjct: 188 ASKADLFRQQIESGLVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSSTDTR 247
Query: 544 TMGKNASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNN 365
T GK A T+F R S++G+ SIV C P+TGRTHQIRVHLQY G+PIAND LY + +
Sbjct: 248 TKGKAAQTKFTRISSDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASGRS 307
Query: 364 TAKTDDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLR 185
KT +I F + ++ A+A +
Sbjct: 308 VQKTTADRAAAI-----------------SFCSPARDVQEDCANACK------------- 337
Query: 184 LNESSYAVSSLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
E F +DP+CTNCPNL+P GY+ EEGLWLHC +YSGP W
Sbjct: 338 -----------------ENWSEDFGIDPMCTNCPNLAPKGYEGEEEGLWLHCVQYSGPGW 380
>gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]
Length = 399
Score = 437 bits (1125), Expect = e-120
Identities = 226/420 (53%), Positives = 278/420 (66%), Gaps = 1/420 (0%)
Frame = -1
Query: 1261 EEDNKNMGFPSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLY 1082
EE K M VW+ P NPP+ DY+F +G+R VRPY+FEFIA+VK RW+GK + DL+
Sbjct: 19 EEKKKKMEI----VWQTPANPPEKHDYIFRNGRRHVRPYYFEFIAHVKIRWAGKTIVDLF 74
Query: 1081 AHEFRKRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLH 902
A EF+ R YEY+V AV+ GRI+VD ++V YIV ++QK+SHF+HRHEPPVLA V VLH
Sbjct: 75 AEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVLALDVKVLH 134
Query: 901 NGNDVVTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNS 722
DVVT+ KPAS PVHPCGQYRKNTV+GIL+AEH LAP+FP+HRLDRLVSGLLI A+N+
Sbjct: 135 KEPDVVTVWKPASAPVHPCGQYRKNTVVGILQAEHDLAPVFPVHRLDRLVSGLLILARNA 194
Query: 721 YTADKFREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPT 542
AD FR++I AGKVQK+Y+A+V+G+FPE E V+ N+ Y+AREGRSTAE + D+P
Sbjct: 195 SKADSFRQQIEAGKVQKQYVARVIGVFPEHEKVVDVNINYNAREGRSTAEVGDSCCDTPV 254
Query: 541 MGKNASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNT 362
GK AST+F R +TNGI SIV C PVTGRTHQIRVHLQY GHPIAND LY + + +T
Sbjct: 255 KGKAASTKFTRIATNGIQSIVLCEPVTGRTHQIRVHLQYAGHPIANDTLYLSKEFVDRST 314
Query: 361 -AKTDDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLR 185
T D + ++ + S SS + LR
Sbjct: 315 EGTTADRAAAGLD---------------RSLSPSSGQ-------------------DFLR 340
Query: 184 LNESSYAVSSLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
NE E + F +DP+CTNCPNL P GYD EEGLWLHC RYSGP W
Sbjct: 341 QNE--------------ESSTEDFCIDPMCTNCPNLGPKGYDGDEEGLWLHCVRYSGPGW 386
>ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Populus trichocarpa]
gi|550322484|gb|EEF05856.2| hypothetical protein
POPTR_0015s11340g [Populus trichocarpa]
Length = 388
Score = 437 bits (1125), Expect = e-120
Identities = 216/406 (53%), Positives = 274/406 (67%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP+ DY+F DG+R VRPY FEFI++VK RW+GK + DL+A EF+ R Y+Y+V
Sbjct: 19 VWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYV 78
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD ++V YIV ++QK+SHFVHRHEPPV+A V +L +DVVT+ KPA+
Sbjct: 79 SAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDVPILDKEDDVVTVWKPAT 138
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+G+L+AEHGLAPLFP+HRLDRLVSGLLI A+N+ AD FR+EI AG
Sbjct: 139 VPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFRQEIEAG 198
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
KVQK+Y+AKV+G+FPE E V+ NV Y+AREGRST E N + SP GK A T+F R
Sbjct: 199 KVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCDGSPIKGKTACTKFTRIG 258
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
TNGI SIV C P+TGRTHQIRVHLQY GHPIAND LY + ++ N + ++ ++ +
Sbjct: 259 TNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENV--TNRSSEGVNADRAAHS 316
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
P + P N+++D E
Sbjct: 317 PNNCLVP-----------------ENNSSDKYE--------------------------- 332
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
+ E F++DP+CTNCPNL P GYD HEEGLWLHC +YSG W
Sbjct: 333 ---DSTEEDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYSGSGW 375
>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
gi|355491829|gb|AES73032.1| RNA pseudourine synthase
[Medicago truncatula]
Length = 380
Score = 437 bits (1124), Expect = e-120
Identities = 228/407 (56%), Positives = 273/407 (67%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP P DY+ +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 15 VWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 74
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD ++V Y+V ++QK+SHF+HRHEPPV+A V +LH DV+T+CKPAS
Sbjct: 75 SAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPILHKEPDVLTVCKPAS 134
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEHGLAPLFP+HRLDRLVSGLLI A+N+ AD FR+EI AG
Sbjct: 135 VPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARNATKADSFRQEIEAG 194
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
V+K+YIAKVVG FPE E+ V+AN+ Y+AREGRSTA EV DS T GK AST+F R S
Sbjct: 195 LVKKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTA-EVRDS----TKGKVASTKFTRIS 249
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
+NG SIV C PVTGRTHQIRVHLQ GHPIAND LY + +T D S A
Sbjct: 250 SNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYI--------SEQTVDRSINGSTA 301
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
S IS + F E VPK +
Sbjct: 302 DRSAC--ISDASLTSNFG--------------EKVPKDYQ-------------------- 325
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
E + F +DP+CTNCPNL+P GYD EEGLWLHC RYSGP WT
Sbjct: 326 ---ENSNEDFRIDPMCTNCPNLAPKGYDTDEEGLWLHCMRYSGPGWT 369
>ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [Cicer arietinum]
Length = 380
Score = 437 bits (1123), Expect = e-120
Identities = 223/407 (54%), Positives = 276/407 (67%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP P DY+F +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 15 VWQTPANPPLPQDYIFRNGTRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 74
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD ++V Y+V ++QK+SHF+HRHEPPV+A V +LH DV+TICKPAS
Sbjct: 75 SAVKCGRIQVDGEMVPVSYLVKSSQKISHFLHRHEPPVMACDVPILHKEPDVLTICKPAS 134
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEHGLAPLFP+HRLDRLVSGLLI A+N AD FR++I AG
Sbjct: 135 VPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARNGTKADIFRQQIEAG 194
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
V+K+YIAKVVG FP+ E+ V+AN+ Y+ REGRSTA EV DS GK AST+F R
Sbjct: 195 LVKKQYIAKVVGEFPKDELIVDANIDYNPREGRSTA-EVRDS----AKGKVASTKFTRII 249
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
+NG SIV C PVTGRTHQIRVHLQY GHPIAND LY
Sbjct: 250 SNGTHSIVSCEPVTGRTHQIRVHLQYSGHPIANDMLY----------------------- 286
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
IS + + + + S+A+ + ADA + +++ D + N +
Sbjct: 287 -------ISEQTVDRSINGSTADRSARIADASLTSNFSEEVPNDCQENSNGD-------- 331
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
F DP+CTNCPNL+P GYD +EEGLWLHCFRYSGP WT
Sbjct: 332 ---------FGFDPMCTNCPNLAPKGYDGNEEGLWLHCFRYSGPGWT 369
>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
pseudourine synthase 7-like isoform 1 [Vitis vinifera]
Length = 386
Score = 437 bits (1123), Expect = e-120
Identities = 225/406 (55%), Positives = 276/406 (67%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP+ DY+F +GKR VRPY+FEFI++VK RW+GK + DL+ EF+ R Y+Y+V
Sbjct: 14 VWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYDYYV 73
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD ++V YIV ++QK+SHFVHRHEPPVLA V+VL DV+TICKPAS
Sbjct: 74 NAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICKPAS 133
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEHGLAPLFPIHRLDRLVSGLLI A+++ AD FR++I AG
Sbjct: 134 VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAG 193
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
VQK+YIAKV G+FP+ E VN NV Y+AREGRST E N ++P GK+A T+F R S
Sbjct: 194 MVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLKGKSACTKFTRIS 253
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
TNG SIV C P+TGRTHQIRVHLQY GHPIAND LY + + D S K + A
Sbjct: 254 TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYL--------SEFSVDRSTKGLSA 305
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
+ A N S PK D +++S TV
Sbjct: 306 DRAAA--------------------NSGCSLPSSSPKSCV---DEYCDDNS-------TV 335
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
+ F++DP+CTNCPNL+P GYDE EEGLWLHC RY GP+W
Sbjct: 336 D--------FSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 373
>sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase 7; AltName: Full=RNA
pseudouridylate synthase 7; AltName: Full=RNA-uridine
isomerase 7 gi|222622934|gb|EEE57066.1| hypothetical
protein OsJ_06883 [Oryza sativa Japonica Group]
Length = 393
Score = 434 bits (1116), Expect = e-119
Identities = 213/411 (51%), Positives = 282/411 (68%)
Frame = -1
Query: 1234 PSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSY 1055
P+G VW+ P NPP+ DY+F DG+R VRPY+FEFI++VK RW+GK + DL+ EF+ R
Sbjct: 5 PAGIVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRPR 64
Query: 1054 EYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTIC 875
EY+V AV+ GR++VD+++V Y+V ++QK+SHF+HRHEPPVL + +L N DVVT+C
Sbjct: 65 EYYVHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTVC 124
Query: 874 KPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREE 695
KPASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+ A+ FR++
Sbjct: 125 KPASVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQQ 184
Query: 694 IGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRF 515
I A +QKEY+AKVVG+FP+ E VNANV ++AREGRSTA EV D + +GK A T+F
Sbjct: 185 IEASLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTA-EVCDGDGKAPIGKQACTKF 243
Query: 514 LRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKK 335
R T+GI SIV C PVTGRTHQIRVHL+++G+PIANDE+Y + + ++ T +
Sbjct: 244 QRICTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRAT 303
Query: 334 SIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSS 155
++ + P S A+L N+ NE +
Sbjct: 304 TLACSLPSSDP-----------DSCADLGNNDT------------------NEDT----- 329
Query: 154 LRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
+A+ F++DP+CTNCPNL+P GYD EE LWLHC RY+GP+W+
Sbjct: 330 --------EADEEFSIDPMCTNCPNLAPVGYDADEEALWLHCVRYTGPDWS 372
>ref|XP_004952569.1| PREDICTED: RNA pseudouridine synthase 7-like [Setaria italica]
Length = 386
Score = 433 bits (1114), Expect = e-119
Identities = 217/410 (52%), Positives = 280/410 (68%)
Frame = -1
Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
+G VW+ P NPP+P DYV +G+R VRPY+FEFI++VK RW+GK + DL+ EF+ RS E
Sbjct: 8 AGIVWQTPANPPEPHDYVIRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRSRE 67
Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
Y+V AV+ GR++VD ++V YIV ++QK+SHF+HRHEPPVLA +++L N DVVTICK
Sbjct: 68 YYVRAVKCGRLQVDGQMVHTDYIVKSSQKISHFLHRHEPPVLAGVISILQNEVDVVTICK 127
Query: 871 PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
PASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+ A+ FR++I
Sbjct: 128 PASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKNADRAECFRQQI 187
Query: 691 GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
AG +QKEY+AKV G+FP+ E V+ANV ++AREGRST EV+D + GK A TRF
Sbjct: 188 EAGLLQKEYVAKVFGVFPDGEQTVDANVNFNAREGRSTV-EVSDGSGKEPNGKQALTRFQ 246
Query: 511 RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
R T+G +SIV C PVTGRTHQIRVHL++ G+PIANDELY + + C +T T + +
Sbjct: 247 RICTDGTYSIVLCKPVTGRTHQIRVHLKHTGYPIANDELYLSGNFCPRSTKGTSASTATA 306
Query: 331 IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
P++ S+A+ A+A ES
Sbjct: 307 PLDPDN----------------SAADHGCKDAEADES----------------------- 327
Query: 151 RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
F++DP+CTNCPNL+P GYD EEGLWLHC RY+GP+W+
Sbjct: 328 ------------FDIDPMCTNCPNLAPVGYDGDEEGLWLHCVRYTGPDWS 365
>gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indica Group]
Length = 393
Score = 433 bits (1114), Expect = e-119
Identities = 211/411 (51%), Positives = 280/411 (68%)
Frame = -1
Query: 1234 PSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSY 1055
P+G VW+ P NPP+ DY+F DG+R VRPY+FEFI++VK RW+GK + DL+ EF+ R
Sbjct: 5 PAGIVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRPR 64
Query: 1054 EYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTIC 875
EY+V AV+ GR++VD+++V Y+V ++QK+SHF+HRHEPPVL + +L N DVVT+C
Sbjct: 65 EYYVHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTVC 124
Query: 874 KPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREE 695
KPASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+ A+ FR++
Sbjct: 125 KPASVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQQ 184
Query: 694 IGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRF 515
I A +QKEY+AKVVG+FP+ E VNANV ++AREGRSTA EV D + +GK A T+F
Sbjct: 185 IEASLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTA-EVCDGDGKAPIGKQACTKF 243
Query: 514 LRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKK 335
R T+GI SIV C PVTGRTHQIRVHL+++G+PIANDE+Y + + ++ T +
Sbjct: 244 QRICTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRAT 303
Query: 334 SIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSS 155
++ + P S A+L N+
Sbjct: 304 TLACSLPSSDP-----------DSCADLGNN----------------------------- 323
Query: 154 LRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
+ +A+ F++DP+CTNCPNL+P GYD EE LWLHC RY+GP+W+
Sbjct: 324 --DTNKDTEADEEFSIDPMCTNCPNLAPVGYDADEEALWLHCVRYTGPDWS 372
>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 385
Score = 433 bits (1113), Expect = e-118
Identities = 222/421 (52%), Positives = 273/421 (64%), Gaps = 2/421 (0%)
Frame = -1
Query: 1261 EEDNKNMGFPSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLY 1082
EE+NKN VW+ P NPP+ DY+F DG+R VRPY+FEFI++ K RW+GK + DL+
Sbjct: 6 EEENKN---DMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVDLF 62
Query: 1081 AHEFRKRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLH 902
A EF+ R Y+Y+V AV+ GRI+VD + V YIV ++QK+SHF+HRHEPPV A + VL+
Sbjct: 63 AEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPVLY 122
Query: 901 NGNDVVTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNS 722
DVVT+ KPA+VPVHPCGQYRKNTV+GIL+AEH LAPLFP+HRLDRLVSGLLI A+N+
Sbjct: 123 KDPDVVTVYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNA 182
Query: 721 YTADKFREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPT 542
AD FR+EI AG VQK+Y+AKVVG+FPE E V N+ Y+AREGRSTAE N DSP
Sbjct: 183 LKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSPP 242
Query: 541 MGKNASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNT 362
GK A T+F R STNG SIV C P+TGRTHQIRVHLQY GHPIAND LY
Sbjct: 243 KGKTACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLY---------- 292
Query: 361 AKTDDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRL 182
L+ HAA + + D
Sbjct: 293 ------------------------------------LSEHAASR-----SAEGMSADRAA 311
Query: 181 NESSYAVS--SLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPN 8
SSY V+ + E + + F++DP+CTNCPNL+P GYD +EE LWLHC +YSGP
Sbjct: 312 CSSSYCVTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQYSGPG 371
Query: 7 W 5
W
Sbjct: 372 W 372
>ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Glycine max]
Length = 381
Score = 432 bits (1110), Expect = e-118
Identities = 226/407 (55%), Positives = 270/407 (66%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP P+DYVF +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 15 VWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 74
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD ++V YIV ++QK+SHF+HRHEPPV+A V VL DV+T+CKPAS
Sbjct: 75 SAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVLQKDIDVLTVCKPAS 134
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLI A+N+ AD FR++I AG
Sbjct: 135 VPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNAAKADIFRQQIEAG 194
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
V K+YIAKV G FPE EV V+AN+ Y+AREGRSTAE + GK AST+F R S
Sbjct: 195 LVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRGSAK-----GKAASTKFTRIS 249
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
TNG SIV C P+TGRTHQIRVHLQY GHPIAND LY + +T D S K + A
Sbjct: 250 TNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYI--------SEQTVDRSVKGLSA 301
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
S IS + F+ LNE
Sbjct: 302 DRSAR--ISGVSLTSNFNEKV-------------------------LNECE--------- 325
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
E + F +DP+CTNCPNL+P GYD EEGLWLHC RYSGP WT
Sbjct: 326 ---ENSNGDFGIDPMCTNCPNLAPKGYDSDEEGLWLHCIRYSGPGWT 369
>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 431 bits (1108), Expect = e-118
Identities = 224/406 (55%), Positives = 275/406 (67%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP+ DY+F +GKR VRPY+FEFI++VK RW+GK + DL+ EF+ R Y+Y+V
Sbjct: 4 VWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYDYYV 63
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD ++V YIV ++QK+SHFVHRHEPPVLA V+VL DV+TICKPAS
Sbjct: 64 NAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICKPAS 123
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEHGLAPLFPIHRLDRLVSGLLI A+++ AD FR++I AG
Sbjct: 124 VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAG 183
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
VQK+YIAKV G+FP+ E VN NV Y+AREGRST N ++P GK+A T+F R S
Sbjct: 184 MVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVG--NCCGNTPLKGKSACTKFTRIS 241
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
TNG SIV C P+TGRTHQIRVHLQY GHPIAND LY + + D S K + A
Sbjct: 242 TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYL--------SEFSVDRSTKGLSA 293
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
+ A N S PK D +++S TV
Sbjct: 294 DRAAA--------------------NSGCSLPSSSPKSCV---DEYCDDNS-------TV 323
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
+ F++DP+CTNCPNL+P GYDE EEGLWLHC RY GP+W
Sbjct: 324 D--------FSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 361
>gb|ESW09863.1| hypothetical protein PHAVU_009G162600g [Phaseolus vulgaris]
Length = 379
Score = 430 bits (1106), Expect = e-118
Identities = 228/407 (56%), Positives = 272/407 (66%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP P DYVF +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 14 VWQTPANPPHPQDYVFRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 73
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD ++V Y+V +QK+SHF+HRHEPPV+A V +L DV+TICKPAS
Sbjct: 74 SAVKCGRIQVDGEMVPVSYVVRPSQKISHFLHRHEPPVMACDVLILQKEPDVLTICKPAS 133
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEHGLAPLFP+HRLDRLVSGLLI A+++ AD FR++I AG
Sbjct: 134 VPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARSAAKADIFRQQIEAG 193
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
V K+YIAKVVG FPE E+ V+AN+ Y+AREGRSTA EV DS GK AST+F R S
Sbjct: 194 LVHKQYIAKVVGEFPEDELIVDANIDYNAREGRSTA-EVRDS----AKGKAASTKFTRIS 248
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
TNG SIV C P+TGRTHQIRVHLQY GHPIAND LY + +T D S K + A
Sbjct: 249 TNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYI--------SEQTVDRSVKGLSA 300
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
S IS + F LN A++ E
Sbjct: 301 DRSAR--ISDVSLTPNFDE---VLNACEANSNED-------------------------- 329
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
F +DP+CTNCPNL P GYD +EEGLWLHCF YSGP WT
Sbjct: 330 ---------FIIDPMCTNCPNLEPKGYDGNEEGLWLHCFCYSGPGWT 367
>ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citrus clementina]
gi|557539094|gb|ESR50138.1| hypothetical protein
CICLE_v10031733mg [Citrus clementina]
Length = 399
Score = 429 bits (1102), Expect = e-117
Identities = 212/407 (52%), Positives = 273/407 (67%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP +DY+F DG+R V+PY+FEFI++VK RW+GK + DL+A EF+ R Y+Y+V
Sbjct: 34 VWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYV 93
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VDE++V Y V ++QK+SHF+HRHEPPV+A V++L DV+T+CKP S
Sbjct: 94 SAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVCKPPS 153
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEH LAPLFP+HRLDRLVSGLLI A+N+ AD FR++I AG
Sbjct: 154 VPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNASKADLFRQQIEAG 213
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
KV K YIA+V G+FPE E V+ N+ Y+A GRSTAE + D+P GK A T+F R S
Sbjct: 214 KVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKFTRIS 273
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
TNG SIV C P+TGRTHQIRVHLQY G+PIAND LY LC + T ++ + A
Sbjct: 274 TNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLY----LCEHVT------HREGMSA 323
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
+ AY ++H+ + S
Sbjct: 324 DRAAAY------------------SHHSPPPVSS-------------------------- 339
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
++ E + F++DP+CTNCPNL+P GY+ HEEGLWLHC RYSGP WT
Sbjct: 340 DKSESSSEDFSIDPICTNCPNLAPKGYEGHEEGLWLHCVRYSGPGWT 386
>dbj|BAJ99439.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 394
Score = 428 bits (1101), Expect = e-117
Identities = 211/409 (51%), Positives = 272/409 (66%)
Frame = -1
Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
+G VW+ P NPP+ DY+F +G+R VRPY+FEFI++ K RW+GK + DL+ EF+ R E
Sbjct: 8 AGIVWQTPANPPEAQDYIFRNGRRYVRPYYFEFISHAKNRWAGKTIVDLFTDEFKGRPRE 67
Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
Y+V AV+ GR++VDE++V YIV ++QK+SHF+HRHEPPVL + +L N DVVT+CK
Sbjct: 68 YYVHAVKCGRLQVDEQMVQADYIVKSSQKISHFLHRHEPPVLGGNIVILQNEVDVVTVCK 127
Query: 871 PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
PASVPVHPCGQYRKNTV+GI+EAEHGL PLFP+HRLDRLVSGLLIFAK++ A++FR++I
Sbjct: 128 PASVPVHPCGQYRKNTVVGIMEAEHGLTPLFPVHRLDRLVSGLLIFAKSAERAERFRQQI 187
Query: 691 GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
A +QKEY+AKVVG+FPE E V+ANV ++AREGRST E N + GK A T+F
Sbjct: 188 EANLLQKEYVAKVVGVFPEGEQTVDANVNFNAREGRSTVEVSNGPGKAIPSGKQACTKFQ 247
Query: 511 RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
R T+G SIV C PVTGRTHQIRVHL++LG+PIANDELY + + C ++ T H S
Sbjct: 248 RICTDGNHSIVLCKPVTGRTHQIRVHLKHLGYPIANDELYVSGNFCPRSSKGTSIHRATS 307
Query: 331 IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
+ S S + +N A
Sbjct: 308 LVC-----------------SLPSPDPDNSA----------------------------- 321
Query: 151 RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
+A+ F +DP+CTNCPNL+P GYD EEGLWLHC RY+GP+W
Sbjct: 322 -------EADLDFGIDPMCTNCPNLAPVGYDGDEEGLWLHCVRYTGPDW 363
>ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like [Citrus sinensis]
Length = 405
Score = 427 bits (1098), Expect = e-117
Identities = 211/407 (51%), Positives = 272/407 (66%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW+ P NPP +DY+F DG+R V+PY+FEFI++VK RW+GK + DL+A EF+ R Y+Y+V
Sbjct: 40 VWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYV 99
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VDE++V Y V ++QK+SHF+HRHEPPV+A V++L DV+T+CKP S
Sbjct: 100 SAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVCKPPS 159
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEH APLFP+HRLDRLVSGLLI A+N+ AD FR++I AG
Sbjct: 160 VPVHPCGQYRKNTVVGILQAEHDFAPLFPVHRLDRLVSGLLILARNASKADLFRQQIEAG 219
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
KV K YIA+V G+FPE E V+ N+ Y+A GRSTAE + D+P GK A T+F R S
Sbjct: 220 KVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKFTRIS 279
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
TNG SIV C P+TGRTHQIRVHLQY G+PIAND LY LC + T ++ + A
Sbjct: 280 TNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLY----LCEHVT------HREGMSA 329
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
+ AY ++H+ + S
Sbjct: 330 DRAAAY------------------SHHSPPPVSS-------------------------- 345
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
++ E + F++DP+CTNCPNL+P GY+ HEEGLWLHC RYSGP WT
Sbjct: 346 DKSESSSEDFSIDPMCTNCPNLAPKGYEGHEEGLWLHCVRYSGPGWT 392
>ref|NP_001136977.1| uncharacterized protein LOC100217137 [Zea mays]
gi|194697832|gb|ACF83000.1| unknown [Zea mays]
gi|413937019|gb|AFW71570.1| hypothetical protein
ZEAMMB73_885155 [Zea mays]
Length = 386
Score = 427 bits (1098), Expect = e-117
Identities = 213/410 (51%), Positives = 276/410 (67%)
Frame = -1
Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
+G VW+ P NPP+ DY+ +G+R VRPY+FEFI++VK RW+GK + DL+ EF+ RS +
Sbjct: 8 AGIVWQTPANPPESHDYIIRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRSRD 67
Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
Y+V AV+ GR++VD ++V YIV ++QK+SHF+HRHEPPVLA +++L N DVVTICK
Sbjct: 68 YYVHAVKCGRLQVDGQMVHTDYIVKSSQKISHFLHRHEPPVLAGDISILKNEVDVVTICK 127
Query: 871 PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
PASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+ A+ FR++I
Sbjct: 128 PASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKNADRAECFRQQI 187
Query: 691 GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
AG +QKEY+AKVVG+FP+ E V+ANV ++AREGRST E + + P GK A TRF
Sbjct: 188 EAGLLQKEYVAKVVGVFPDGEQTVDANVNFNAREGRSTVEISGGAGEEPN-GKQALTRFQ 246
Query: 511 RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
R T+G SIV C PVTGRTHQIRVHL+ G+PIANDELY + + C +T T+ K +
Sbjct: 247 RICTDGTHSIVLCKPVTGRTHQIRVHLKQAGYPIANDELYLSGNFCPRSTKGTNASKKIA 306
Query: 331 IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
P+ S+ ++ + DA V
Sbjct: 307 PSDPD------------------SSAADHGSKDAGTDVE--------------------- 327
Query: 151 RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
F++DP+CTNCPNL+P GYD EEGLWLHC RY+GP+W+
Sbjct: 328 ------------FDIDPMCTNCPNLAPVGYDRDEEGLWLHCVRYTGPDWS 365
>ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [Fragaria vesca subsp.
vesca]
Length = 383
Score = 424 bits (1089), Expect = e-116
Identities = 211/406 (51%), Positives = 273/406 (67%)
Frame = -1
Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
VW++P NPP+ DY+F +G+R VRPY+FEFIA+VK RW+GK + DL+ EF+ R+ +Y++
Sbjct: 13 VWQSPANPPERKDYIFRNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFTDEFKGRNRDYYI 72
Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
AV+ GRI+VD +LV +IV +QK+SHF+HRHEPPV+ V +L DVVTICKPAS
Sbjct: 73 SAVKCGRIQVDGQLVPVSFIVKPSQKISHFLHRHEPPVMTWDVKILQTEPDVVTICKPAS 132
Query: 862 VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
VPVHPCGQYRKNTV+GIL+AEHGLAPLFPIHRLDRLVSGLLI A+++ AD FR++I G
Sbjct: 133 VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSAAQADIFRQQIEGG 192
Query: 682 KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
V K+YIA+V+G FPE+E V+AN+ ++AREGRS+AE + +D+PT GK A T+F R S
Sbjct: 193 MVHKQYIARVIGEFPEEEQVVDANIDHNAREGRSSAEVGDSCSDAPTKGKTACTKFTRIS 252
Query: 502 TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
+NGI SIV C PVTGRTHQIRVHLQ+ GHPIAND LY + D S + + A
Sbjct: 253 SNGIQSIVLCEPVTGRTHQIRVHLQHAGHPIANDMLYL--------SKHVSDRSAEGMGA 304
Query: 322 PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
R++A ++ A + +
Sbjct: 305 -----------------DRAAANSDHSPASVVGKIKSTSH-------------------- 327
Query: 142 ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
E + F++DP+CTNCP+L+P GYD HEE LWLHCFRYSGP W
Sbjct: 328 ---EDSSEDFSIDPMCTNCPSLAPKGYDYHEEALWLHCFRYSGPGW 370
>ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [Brachypodium distachyon]
Length = 384
Score = 421 bits (1083), Expect = e-115
Identities = 209/410 (50%), Positives = 269/410 (65%)
Frame = -1
Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
+G VW+ P NPP+ DY+F +G+R VRPY+FEFI++VK RW+GK + DL+ EF+ R YE
Sbjct: 8 AGIVWQTPANPPEAQDYIFRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYE 67
Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
Y+V AV+ GR++VDE+ V YIV ++QK+SHF+HRHEPPVL + +L N DVVT+CK
Sbjct: 68 YYVHAVKCGRLQVDEQTVPADYIVKSSQKISHFLHRHEPPVLGGNILILQNEVDVVTVCK 127
Query: 871 PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
PASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAK++ A+ FR++I
Sbjct: 128 PASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKSADRAECFRQQI 187
Query: 691 GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
A +QKEY+AKVVG+FP+ E V+ANV ++AREGRST E + + GK A T+F
Sbjct: 188 EANLLQKEYVAKVVGVFPDGEQTVDANVNFNAREGRSTVEVCDGPGKALPSGKQACTKFQ 247
Query: 511 RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
R T+G SIV C PVTGRTHQIRVHL+++G+PIANDELY + + C ++ T + S
Sbjct: 248 RIFTDGNHSIVLCKPVTGRTHQIRVHLKHIGYPIANDELYLSGNFCPRSSKGTGINRATS 307
Query: 331 IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
+ S P SSAE
Sbjct: 308 LACSLSSPDP-----------DSSAEAEE------------------------------- 325
Query: 151 RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
F +DP+CTNCPNL+P GYD EE LWLHC RY+GP+W+
Sbjct: 326 ------------FGIDPMCTNCPNLAPVGYDGDEEALWLHCVRYTGPDWS 363