BLASTX nr result

ID: Ephedra26_contig00003021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003021
         (1477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844587.1| hypothetical protein AMTR_s00016p00206840 [A...   461   e-127
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   439   e-120
gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]           437   e-120
ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Popu...   437   e-120
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...   437   e-120
ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [...   437   e-120
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   437   e-120
sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase ...   434   e-119
ref|XP_004952569.1| PREDICTED: RNA pseudouridine synthase 7-like...   433   e-119
gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indi...   433   e-119
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   433   e-118
ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Gly...   432   e-118
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              431   e-118
gb|ESW09863.1| hypothetical protein PHAVU_009G162600g [Phaseolus...   430   e-118
ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citr...   429   e-117
dbj|BAJ99439.1| predicted protein [Hordeum vulgare subsp. vulgare]    428   e-117
ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like...   427   e-117
ref|NP_001136977.1| uncharacterized protein LOC100217137 [Zea ma...   427   e-117
ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [...   424   e-116
ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [...   421   e-115

>ref|XP_006844587.1| hypothetical protein AMTR_s00016p00206840 [Amborella trichopoda]
            gi|548847058|gb|ERN06262.1| hypothetical protein
            AMTR_s00016p00206840 [Amborella trichopoda]
          Length = 425

 Score =  461 bits (1185), Expect = e-127
 Identities = 228/417 (54%), Positives = 291/417 (69%), Gaps = 2/417 (0%)
 Frame = -1

Query: 1246 NMGFPSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFR 1067
            +  FP   VWE+P+NPPKP+DY+F DG RLV+PY+FEFI++VK RW GK + DL+ HEFR
Sbjct: 37   SQNFPMDVVWESPENPPKPEDYIFRDGMRLVKPYYFEFISHVKSRWVGKTIVDLFTHEFR 96

Query: 1066 KRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDV 887
            +R  EY++ AV  GRI+VD+++V   Y+V ++QK+SHFVHRHEPPV+A  V++L  G DV
Sbjct: 97   QRPQEYYLAAVNAGRIQVDDQMVHVSYVVQSSQKISHFVHRHEPPVMAWGVSILEKGTDV 156

Query: 886  VTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADK 707
            VT+CKPASVPVHPCGQYRKNTV+GILEAE  +APLFP+HRLDRLVSGLLI A+++  AD+
Sbjct: 157  VTVCKPASVPVHPCGQYRKNTVVGILEAERDIAPLFPVHRLDRLVSGLLILARSAAAADR 216

Query: 706  FREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPT-MGKN 530
            FR++I AGKV+KEYIAKV+G+FPE+E  V+ANV YDAREG+S+ E  +  + + T  GK 
Sbjct: 217  FRKQIEAGKVKKEYIAKVLGVFPEEEQVVDANVDYDAREGKSSVELWDGDHCNRTRKGKV 276

Query: 529  ASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKT- 353
            ASTRF R STNGI SIVKC P+TGRTHQIRVHLQYLG+PI ND LY +  +   +  +T 
Sbjct: 277  ASTRFTRISTNGIQSIVKCEPLTGRTHQIRVHLQYLGYPIGNDALYLSETVSLRSAKRTC 336

Query: 352  DDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNES 173
             D +  +    + EA     +H + +    S E++          PK+            
Sbjct: 337  ADRATTTTVTEDCEASGSVEDHQISEKLTESGEMH----------PKED----------- 375

Query: 172  SYAVSSLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                               F +DP+CTNCPNL+P GYD HEEGLWLHC RYSGPNWT
Sbjct: 376  -------------------FRIDPMCTNCPNLAPHGYDGHEEGLWLHCVRYSGPNWT 413


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
            gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
            pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  439 bits (1129), Expect = e-120
 Identities = 219/420 (52%), Positives = 280/420 (66%), Gaps = 1/420 (0%)
 Frame = -1

Query: 1261 EEDNKNMGFP-SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDL 1085
            EE++  MG    G VW+ P NPP+  DY+F +G+R VRPY+FEFIA+VK RW+GK + DL
Sbjct: 8    EEESMRMGMGMGGIVWQTPDNPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTIVDL 67

Query: 1084 YAHEFRKRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVL 905
            +A EF+ R YEY+V+AV  GRI+VD ++V   YIV ++QK+SHF+HRHEPPV+A  V VL
Sbjct: 68   FAEEFKGRPYEYYVDAVECGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGVKVL 127

Query: 904  HNGNDVVTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKN 725
                +V+T+CKPASVPVHPCGQYRKNTV+GILEAEHGLAPLFPIHRLDRLVSGLLI A+N
Sbjct: 128  KEEEEVLTVCKPASVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARN 187

Query: 724  SYTADKFREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSP 545
            +  AD FR++I +G V+K+YIA+VVG+FPE+E  V+AN+ Y+ REGRSTAE V+ S D+ 
Sbjct: 188  ASKADLFRQQIESGLVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSSTDTR 247

Query: 544  TMGKNASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNN 365
            T GK A T+F R S++G+ SIV C P+TGRTHQIRVHLQY G+PIAND LY   +    +
Sbjct: 248  TKGKAAQTKFTRISSDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASGRS 307

Query: 364  TAKTDDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLR 185
              KT      +I                  F   + ++    A+A +             
Sbjct: 308  VQKTTADRAAAI-----------------SFCSPARDVQEDCANACK------------- 337

Query: 184  LNESSYAVSSLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
                             E     F +DP+CTNCPNL+P GY+  EEGLWLHC +YSGP W
Sbjct: 338  -----------------ENWSEDFGIDPMCTNCPNLAPKGYEGEEEGLWLHCVQYSGPGW 380


>gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]
          Length = 399

 Score =  437 bits (1125), Expect = e-120
 Identities = 226/420 (53%), Positives = 278/420 (66%), Gaps = 1/420 (0%)
 Frame = -1

Query: 1261 EEDNKNMGFPSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLY 1082
            EE  K M      VW+ P NPP+  DY+F +G+R VRPY+FEFIA+VK RW+GK + DL+
Sbjct: 19   EEKKKKMEI----VWQTPANPPEKHDYIFRNGRRHVRPYYFEFIAHVKIRWAGKTIVDLF 74

Query: 1081 AHEFRKRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLH 902
            A EF+ R YEY+V AV+ GRI+VD ++V   YIV ++QK+SHF+HRHEPPVLA  V VLH
Sbjct: 75   AEEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVLALDVKVLH 134

Query: 901  NGNDVVTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNS 722
               DVVT+ KPAS PVHPCGQYRKNTV+GIL+AEH LAP+FP+HRLDRLVSGLLI A+N+
Sbjct: 135  KEPDVVTVWKPASAPVHPCGQYRKNTVVGILQAEHDLAPVFPVHRLDRLVSGLLILARNA 194

Query: 721  YTADKFREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPT 542
              AD FR++I AGKVQK+Y+A+V+G+FPE E  V+ N+ Y+AREGRSTAE  +   D+P 
Sbjct: 195  SKADSFRQQIEAGKVQKQYVARVIGVFPEHEKVVDVNINYNAREGRSTAEVGDSCCDTPV 254

Query: 541  MGKNASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNT 362
             GK AST+F R +TNGI SIV C PVTGRTHQIRVHLQY GHPIAND LY + +    +T
Sbjct: 255  KGKAASTKFTRIATNGIQSIVLCEPVTGRTHQIRVHLQYAGHPIANDTLYLSKEFVDRST 314

Query: 361  -AKTDDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLR 185
               T D +   ++               +  S SS +                     LR
Sbjct: 315  EGTTADRAAAGLD---------------RSLSPSSGQ-------------------DFLR 340

Query: 184  LNESSYAVSSLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
             NE              E +   F +DP+CTNCPNL P GYD  EEGLWLHC RYSGP W
Sbjct: 341  QNE--------------ESSTEDFCIDPMCTNCPNLGPKGYDGDEEGLWLHCVRYSGPGW 386


>ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Populus trichocarpa]
            gi|550322484|gb|EEF05856.2| hypothetical protein
            POPTR_0015s11340g [Populus trichocarpa]
          Length = 388

 Score =  437 bits (1125), Expect = e-120
 Identities = 216/406 (53%), Positives = 274/406 (67%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP+  DY+F DG+R VRPY FEFI++VK RW+GK + DL+A EF+ R Y+Y+V
Sbjct: 19   VWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYV 78

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD ++V   YIV ++QK+SHFVHRHEPPV+A  V +L   +DVVT+ KPA+
Sbjct: 79   SAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDVPILDKEDDVVTVWKPAT 138

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+G+L+AEHGLAPLFP+HRLDRLVSGLLI A+N+  AD FR+EI AG
Sbjct: 139  VPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFRQEIEAG 198

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
            KVQK+Y+AKV+G+FPE E  V+ NV Y+AREGRST E  N  + SP  GK A T+F R  
Sbjct: 199  KVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCDGSPIKGKTACTKFTRIG 258

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            TNGI SIV C P+TGRTHQIRVHLQY GHPIAND LY + ++   N +    ++ ++  +
Sbjct: 259  TNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENV--TNRSSEGVNADRAAHS 316

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
            P +   P                  N+++D  E                           
Sbjct: 317  PNNCLVP-----------------ENNSSDKYE--------------------------- 332

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
               +  E  F++DP+CTNCPNL P GYD HEEGLWLHC +YSG  W
Sbjct: 333  ---DSTEEDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYSGSGW 375


>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
            gi|355491829|gb|AES73032.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 380

 Score =  437 bits (1124), Expect = e-120
 Identities = 228/407 (56%), Positives = 273/407 (67%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP P DY+  +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 15   VWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 74

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD ++V   Y+V ++QK+SHF+HRHEPPV+A  V +LH   DV+T+CKPAS
Sbjct: 75   SAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPILHKEPDVLTVCKPAS 134

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEHGLAPLFP+HRLDRLVSGLLI A+N+  AD FR+EI AG
Sbjct: 135  VPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARNATKADSFRQEIEAG 194

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
             V+K+YIAKVVG FPE E+ V+AN+ Y+AREGRSTA EV DS    T GK AST+F R S
Sbjct: 195  LVKKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTA-EVRDS----TKGKVASTKFTRIS 249

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            +NG  SIV C PVTGRTHQIRVHLQ  GHPIAND LY         + +T D S     A
Sbjct: 250  SNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYI--------SEQTVDRSINGSTA 301

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
              S    IS   +   F               E VPK  +                    
Sbjct: 302  DRSAC--ISDASLTSNFG--------------EKVPKDYQ-------------------- 325

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
               E +   F +DP+CTNCPNL+P GYD  EEGLWLHC RYSGP WT
Sbjct: 326  ---ENSNEDFRIDPMCTNCPNLAPKGYDTDEEGLWLHCMRYSGPGWT 369


>ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [Cicer arietinum]
          Length = 380

 Score =  437 bits (1123), Expect = e-120
 Identities = 223/407 (54%), Positives = 276/407 (67%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP P DY+F +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 15   VWQTPANPPLPQDYIFRNGTRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 74

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD ++V   Y+V ++QK+SHF+HRHEPPV+A  V +LH   DV+TICKPAS
Sbjct: 75   SAVKCGRIQVDGEMVPVSYLVKSSQKISHFLHRHEPPVMACDVPILHKEPDVLTICKPAS 134

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEHGLAPLFP+HRLDRLVSGLLI A+N   AD FR++I AG
Sbjct: 135  VPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARNGTKADIFRQQIEAG 194

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
             V+K+YIAKVVG FP+ E+ V+AN+ Y+ REGRSTA EV DS      GK AST+F R  
Sbjct: 195  LVKKQYIAKVVGEFPKDELIVDANIDYNPREGRSTA-EVRDS----AKGKVASTKFTRII 249

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            +NG  SIV C PVTGRTHQIRVHLQY GHPIAND LY                       
Sbjct: 250  SNGTHSIVSCEPVTGRTHQIRVHLQYSGHPIANDMLY----------------------- 286

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
                   IS + + +  + S+A+ +   ADA  +    +++  D + N +          
Sbjct: 287  -------ISEQTVDRSINGSTADRSARIADASLTSNFSEEVPNDCQENSNGD-------- 331

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                     F  DP+CTNCPNL+P GYD +EEGLWLHCFRYSGP WT
Sbjct: 332  ---------FGFDPMCTNCPNLAPKGYDGNEEGLWLHCFRYSGPGWT 369


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  437 bits (1123), Expect = e-120
 Identities = 225/406 (55%), Positives = 276/406 (67%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP+  DY+F +GKR VRPY+FEFI++VK RW+GK + DL+  EF+ R Y+Y+V
Sbjct: 14   VWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYDYYV 73

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD ++V   YIV ++QK+SHFVHRHEPPVLA  V+VL    DV+TICKPAS
Sbjct: 74   NAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICKPAS 133

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEHGLAPLFPIHRLDRLVSGLLI A+++  AD FR++I AG
Sbjct: 134  VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAG 193

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
             VQK+YIAKV G+FP+ E  VN NV Y+AREGRST E  N   ++P  GK+A T+F R S
Sbjct: 194  MVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLKGKSACTKFTRIS 253

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            TNG  SIV C P+TGRTHQIRVHLQY GHPIAND LY         +  + D S K + A
Sbjct: 254  TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYL--------SEFSVDRSTKGLSA 305

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
              + A                    N       S PK      D   +++S       TV
Sbjct: 306  DRAAA--------------------NSGCSLPSSSPKSCV---DEYCDDNS-------TV 335

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
            +        F++DP+CTNCPNL+P GYDE EEGLWLHC RY GP+W
Sbjct: 336  D--------FSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 373


>sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase 7; AltName: Full=RNA
            pseudouridylate synthase 7; AltName: Full=RNA-uridine
            isomerase 7 gi|222622934|gb|EEE57066.1| hypothetical
            protein OsJ_06883 [Oryza sativa Japonica Group]
          Length = 393

 Score =  434 bits (1116), Expect = e-119
 Identities = 213/411 (51%), Positives = 282/411 (68%)
 Frame = -1

Query: 1234 PSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSY 1055
            P+G VW+ P NPP+  DY+F DG+R VRPY+FEFI++VK RW+GK + DL+  EF+ R  
Sbjct: 5    PAGIVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRPR 64

Query: 1054 EYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTIC 875
            EY+V AV+ GR++VD+++V   Y+V ++QK+SHF+HRHEPPVL   + +L N  DVVT+C
Sbjct: 65   EYYVHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTVC 124

Query: 874  KPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREE 695
            KPASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+  A+ FR++
Sbjct: 125  KPASVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQQ 184

Query: 694  IGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRF 515
            I A  +QKEY+AKVVG+FP+ E  VNANV ++AREGRSTA EV D +    +GK A T+F
Sbjct: 185  IEASLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTA-EVCDGDGKAPIGKQACTKF 243

Query: 514  LRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKK 335
             R  T+GI SIV C PVTGRTHQIRVHL+++G+PIANDE+Y + +    ++  T  +   
Sbjct: 244  QRICTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRAT 303

Query: 334  SIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSS 155
            ++      + P            S A+L N+                    NE +     
Sbjct: 304  TLACSLPSSDP-----------DSCADLGNNDT------------------NEDT----- 329

Query: 154  LRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                    +A+  F++DP+CTNCPNL+P GYD  EE LWLHC RY+GP+W+
Sbjct: 330  --------EADEEFSIDPMCTNCPNLAPVGYDADEEALWLHCVRYTGPDWS 372


>ref|XP_004952569.1| PREDICTED: RNA pseudouridine synthase 7-like [Setaria italica]
          Length = 386

 Score =  433 bits (1114), Expect = e-119
 Identities = 217/410 (52%), Positives = 280/410 (68%)
 Frame = -1

Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
            +G VW+ P NPP+P DYV  +G+R VRPY+FEFI++VK RW+GK + DL+  EF+ RS E
Sbjct: 8    AGIVWQTPANPPEPHDYVIRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRSRE 67

Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
            Y+V AV+ GR++VD ++V   YIV ++QK+SHF+HRHEPPVLA  +++L N  DVVTICK
Sbjct: 68   YYVRAVKCGRLQVDGQMVHTDYIVKSSQKISHFLHRHEPPVLAGVISILQNEVDVVTICK 127

Query: 871  PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
            PASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+  A+ FR++I
Sbjct: 128  PASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKNADRAECFRQQI 187

Query: 691  GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
             AG +QKEY+AKV G+FP+ E  V+ANV ++AREGRST  EV+D +     GK A TRF 
Sbjct: 188  EAGLLQKEYVAKVFGVFPDGEQTVDANVNFNAREGRSTV-EVSDGSGKEPNGKQALTRFQ 246

Query: 511  RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
            R  T+G +SIV C PVTGRTHQIRVHL++ G+PIANDELY + + C  +T  T   +  +
Sbjct: 247  RICTDGTYSIVLCKPVTGRTHQIRVHLKHTGYPIANDELYLSGNFCPRSTKGTSASTATA 306

Query: 331  IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
               P++                S+A+     A+A ES                       
Sbjct: 307  PLDPDN----------------SAADHGCKDAEADES----------------------- 327

Query: 151  RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                        F++DP+CTNCPNL+P GYD  EEGLWLHC RY+GP+W+
Sbjct: 328  ------------FDIDPMCTNCPNLAPVGYDGDEEGLWLHCVRYTGPDWS 365


>gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indica Group]
          Length = 393

 Score =  433 bits (1114), Expect = e-119
 Identities = 211/411 (51%), Positives = 280/411 (68%)
 Frame = -1

Query: 1234 PSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSY 1055
            P+G VW+ P NPP+  DY+F DG+R VRPY+FEFI++VK RW+GK + DL+  EF+ R  
Sbjct: 5    PAGIVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRPR 64

Query: 1054 EYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTIC 875
            EY+V AV+ GR++VD+++V   Y+V ++QK+SHF+HRHEPPVL   + +L N  DVVT+C
Sbjct: 65   EYYVHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTVC 124

Query: 874  KPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREE 695
            KPASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+  A+ FR++
Sbjct: 125  KPASVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQQ 184

Query: 694  IGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRF 515
            I A  +QKEY+AKVVG+FP+ E  VNANV ++AREGRSTA EV D +    +GK A T+F
Sbjct: 185  IEASLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTA-EVCDGDGKAPIGKQACTKF 243

Query: 514  LRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKK 335
             R  T+GI SIV C PVTGRTHQIRVHL+++G+PIANDE+Y + +    ++  T  +   
Sbjct: 244  QRICTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRAT 303

Query: 334  SIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSS 155
            ++      + P            S A+L N+                             
Sbjct: 304  TLACSLPSSDP-----------DSCADLGNN----------------------------- 323

Query: 154  LRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                 +  +A+  F++DP+CTNCPNL+P GYD  EE LWLHC RY+GP+W+
Sbjct: 324  --DTNKDTEADEEFSIDPMCTNCPNLAPVGYDADEEALWLHCVRYTGPDWS 372


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  433 bits (1113), Expect = e-118
 Identities = 222/421 (52%), Positives = 273/421 (64%), Gaps = 2/421 (0%)
 Frame = -1

Query: 1261 EEDNKNMGFPSGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLY 1082
            EE+NKN       VW+ P NPP+  DY+F DG+R VRPY+FEFI++ K RW+GK + DL+
Sbjct: 6    EEENKN---DMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVDLF 62

Query: 1081 AHEFRKRSYEYFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLH 902
            A EF+ R Y+Y+V AV+ GRI+VD + V   YIV ++QK+SHF+HRHEPPV A  + VL+
Sbjct: 63   AEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPVLY 122

Query: 901  NGNDVVTICKPASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNS 722
               DVVT+ KPA+VPVHPCGQYRKNTV+GIL+AEH LAPLFP+HRLDRLVSGLLI A+N+
Sbjct: 123  KDPDVVTVYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNA 182

Query: 721  YTADKFREEIGAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPT 542
              AD FR+EI AG VQK+Y+AKVVG+FPE E  V  N+ Y+AREGRSTAE  N   DSP 
Sbjct: 183  LKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSPP 242

Query: 541  MGKNASTRFLRHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNT 362
             GK A T+F R STNG  SIV C P+TGRTHQIRVHLQY GHPIAND LY          
Sbjct: 243  KGKTACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLY---------- 292

Query: 361  AKTDDHSKKSIEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRL 182
                                                L+ HAA         + +  D   
Sbjct: 293  ------------------------------------LSEHAASR-----SAEGMSADRAA 311

Query: 181  NESSYAVS--SLRTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPN 8
              SSY V+     +    E + + F++DP+CTNCPNL+P GYD +EE LWLHC +YSGP 
Sbjct: 312  CSSSYCVTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQYSGPG 371

Query: 7    W 5
            W
Sbjct: 372  W 372


>ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Glycine max]
          Length = 381

 Score =  432 bits (1110), Expect = e-118
 Identities = 226/407 (55%), Positives = 270/407 (66%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP P+DYVF +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 15   VWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 74

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD ++V   YIV ++QK+SHF+HRHEPPV+A  V VL    DV+T+CKPAS
Sbjct: 75   SAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVLQKDIDVLTVCKPAS 134

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLI A+N+  AD FR++I AG
Sbjct: 135  VPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNAAKADIFRQQIEAG 194

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
             V K+YIAKV G FPE EV V+AN+ Y+AREGRSTAE    +      GK AST+F R S
Sbjct: 195  LVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRGSAK-----GKAASTKFTRIS 249

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            TNG  SIV C P+TGRTHQIRVHLQY GHPIAND LY         + +T D S K + A
Sbjct: 250  TNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYI--------SEQTVDRSVKGLSA 301

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
              S    IS   +   F+                            LNE           
Sbjct: 302  DRSAR--ISGVSLTSNFNEKV-------------------------LNECE--------- 325

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
               E +   F +DP+CTNCPNL+P GYD  EEGLWLHC RYSGP WT
Sbjct: 326  ---ENSNGDFGIDPMCTNCPNLAPKGYDSDEEGLWLHCIRYSGPGWT 369


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  431 bits (1108), Expect = e-118
 Identities = 224/406 (55%), Positives = 275/406 (67%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP+  DY+F +GKR VRPY+FEFI++VK RW+GK + DL+  EF+ R Y+Y+V
Sbjct: 4    VWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYDYYV 63

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD ++V   YIV ++QK+SHFVHRHEPPVLA  V+VL    DV+TICKPAS
Sbjct: 64   NAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICKPAS 123

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEHGLAPLFPIHRLDRLVSGLLI A+++  AD FR++I AG
Sbjct: 124  VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAG 183

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
             VQK+YIAKV G+FP+ E  VN NV Y+AREGRST    N   ++P  GK+A T+F R S
Sbjct: 184  MVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVG--NCCGNTPLKGKSACTKFTRIS 241

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            TNG  SIV C P+TGRTHQIRVHLQY GHPIAND LY         +  + D S K + A
Sbjct: 242  TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYL--------SEFSVDRSTKGLSA 293

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
              + A                    N       S PK      D   +++S       TV
Sbjct: 294  DRAAA--------------------NSGCSLPSSSPKSCV---DEYCDDNS-------TV 323

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
            +        F++DP+CTNCPNL+P GYDE EEGLWLHC RY GP+W
Sbjct: 324  D--------FSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 361


>gb|ESW09863.1| hypothetical protein PHAVU_009G162600g [Phaseolus vulgaris]
          Length = 379

 Score =  430 bits (1106), Expect = e-118
 Identities = 228/407 (56%), Positives = 272/407 (66%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP P DYVF +G R VRPY+FEFIA+VK RW+GK + DL+A EF+ R YEY+V
Sbjct: 14   VWQTPANPPHPQDYVFRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV 73

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD ++V   Y+V  +QK+SHF+HRHEPPV+A  V +L    DV+TICKPAS
Sbjct: 74   SAVKCGRIQVDGEMVPVSYVVRPSQKISHFLHRHEPPVMACDVLILQKEPDVLTICKPAS 133

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEHGLAPLFP+HRLDRLVSGLLI A+++  AD FR++I AG
Sbjct: 134  VPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARSAAKADIFRQQIEAG 193

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
             V K+YIAKVVG FPE E+ V+AN+ Y+AREGRSTA EV DS      GK AST+F R S
Sbjct: 194  LVHKQYIAKVVGEFPEDELIVDANIDYNAREGRSTA-EVRDS----AKGKAASTKFTRIS 248

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            TNG  SIV C P+TGRTHQIRVHLQY GHPIAND LY         + +T D S K + A
Sbjct: 249  TNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYI--------SEQTVDRSVKGLSA 300

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
              S    IS   +   F      LN   A++ E                           
Sbjct: 301  DRSAR--ISDVSLTPNFDE---VLNACEANSNED-------------------------- 329

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                     F +DP+CTNCPNL P GYD +EEGLWLHCF YSGP WT
Sbjct: 330  ---------FIIDPMCTNCPNLEPKGYDGNEEGLWLHCFCYSGPGWT 367


>ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citrus clementina]
            gi|557539094|gb|ESR50138.1| hypothetical protein
            CICLE_v10031733mg [Citrus clementina]
          Length = 399

 Score =  429 bits (1102), Expect = e-117
 Identities = 212/407 (52%), Positives = 273/407 (67%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP  +DY+F DG+R V+PY+FEFI++VK RW+GK + DL+A EF+ R Y+Y+V
Sbjct: 34   VWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYV 93

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VDE++V   Y V ++QK+SHF+HRHEPPV+A  V++L    DV+T+CKP S
Sbjct: 94   SAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVCKPPS 153

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEH LAPLFP+HRLDRLVSGLLI A+N+  AD FR++I AG
Sbjct: 154  VPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNASKADLFRQQIEAG 213

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
            KV K YIA+V G+FPE E  V+ N+ Y+A  GRSTAE  +   D+P  GK A T+F R S
Sbjct: 214  KVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKFTRIS 273

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            TNG  SIV C P+TGRTHQIRVHLQY G+PIAND LY    LC + T       ++ + A
Sbjct: 274  TNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLY----LCEHVT------HREGMSA 323

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
              + AY                  ++H+   + S                          
Sbjct: 324  DRAAAY------------------SHHSPPPVSS-------------------------- 339

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
            ++ E +   F++DP+CTNCPNL+P GY+ HEEGLWLHC RYSGP WT
Sbjct: 340  DKSESSSEDFSIDPICTNCPNLAPKGYEGHEEGLWLHCVRYSGPGWT 386


>dbj|BAJ99439.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 394

 Score =  428 bits (1101), Expect = e-117
 Identities = 211/409 (51%), Positives = 272/409 (66%)
 Frame = -1

Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
            +G VW+ P NPP+  DY+F +G+R VRPY+FEFI++ K RW+GK + DL+  EF+ R  E
Sbjct: 8    AGIVWQTPANPPEAQDYIFRNGRRYVRPYYFEFISHAKNRWAGKTIVDLFTDEFKGRPRE 67

Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
            Y+V AV+ GR++VDE++V   YIV ++QK+SHF+HRHEPPVL   + +L N  DVVT+CK
Sbjct: 68   YYVHAVKCGRLQVDEQMVQADYIVKSSQKISHFLHRHEPPVLGGNIVILQNEVDVVTVCK 127

Query: 871  PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
            PASVPVHPCGQYRKNTV+GI+EAEHGL PLFP+HRLDRLVSGLLIFAK++  A++FR++I
Sbjct: 128  PASVPVHPCGQYRKNTVVGIMEAEHGLTPLFPVHRLDRLVSGLLIFAKSAERAERFRQQI 187

Query: 691  GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
             A  +QKEY+AKVVG+FPE E  V+ANV ++AREGRST E  N    +   GK A T+F 
Sbjct: 188  EANLLQKEYVAKVVGVFPEGEQTVDANVNFNAREGRSTVEVSNGPGKAIPSGKQACTKFQ 247

Query: 511  RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
            R  T+G  SIV C PVTGRTHQIRVHL++LG+PIANDELY + + C  ++  T  H   S
Sbjct: 248  RICTDGNHSIVLCKPVTGRTHQIRVHLKHLGYPIANDELYVSGNFCPRSSKGTSIHRATS 307

Query: 331  IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
            +                   S  S + +N A                             
Sbjct: 308  LVC-----------------SLPSPDPDNSA----------------------------- 321

Query: 151  RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
                   +A+  F +DP+CTNCPNL+P GYD  EEGLWLHC RY+GP+W
Sbjct: 322  -------EADLDFGIDPMCTNCPNLAPVGYDGDEEGLWLHCVRYTGPDW 363


>ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like [Citrus sinensis]
          Length = 405

 Score =  427 bits (1098), Expect = e-117
 Identities = 211/407 (51%), Positives = 272/407 (66%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW+ P NPP  +DY+F DG+R V+PY+FEFI++VK RW+GK + DL+A EF+ R Y+Y+V
Sbjct: 40   VWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYV 99

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VDE++V   Y V ++QK+SHF+HRHEPPV+A  V++L    DV+T+CKP S
Sbjct: 100  SAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVCKPPS 159

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEH  APLFP+HRLDRLVSGLLI A+N+  AD FR++I AG
Sbjct: 160  VPVHPCGQYRKNTVVGILQAEHDFAPLFPVHRLDRLVSGLLILARNASKADLFRQQIEAG 219

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
            KV K YIA+V G+FPE E  V+ N+ Y+A  GRSTAE  +   D+P  GK A T+F R S
Sbjct: 220  KVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKFTRIS 279

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            TNG  SIV C P+TGRTHQIRVHLQY G+PIAND LY    LC + T       ++ + A
Sbjct: 280  TNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLY----LCEHVT------HREGMSA 329

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
              + AY                  ++H+   + S                          
Sbjct: 330  DRAAAY------------------SHHSPPPVSS-------------------------- 345

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
            ++ E +   F++DP+CTNCPNL+P GY+ HEEGLWLHC RYSGP WT
Sbjct: 346  DKSESSSEDFSIDPMCTNCPNLAPKGYEGHEEGLWLHCVRYSGPGWT 392


>ref|NP_001136977.1| uncharacterized protein LOC100217137 [Zea mays]
            gi|194697832|gb|ACF83000.1| unknown [Zea mays]
            gi|413937019|gb|AFW71570.1| hypothetical protein
            ZEAMMB73_885155 [Zea mays]
          Length = 386

 Score =  427 bits (1098), Expect = e-117
 Identities = 213/410 (51%), Positives = 276/410 (67%)
 Frame = -1

Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
            +G VW+ P NPP+  DY+  +G+R VRPY+FEFI++VK RW+GK + DL+  EF+ RS +
Sbjct: 8    AGIVWQTPANPPESHDYIIRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRSRD 67

Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
            Y+V AV+ GR++VD ++V   YIV ++QK+SHF+HRHEPPVLA  +++L N  DVVTICK
Sbjct: 68   YYVHAVKCGRLQVDGQMVHTDYIVKSSQKISHFLHRHEPPVLAGDISILKNEVDVVTICK 127

Query: 871  PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
            PASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAKN+  A+ FR++I
Sbjct: 128  PASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKNADRAECFRQQI 187

Query: 691  GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
             AG +QKEY+AKVVG+FP+ E  V+ANV ++AREGRST E    + + P  GK A TRF 
Sbjct: 188  EAGLLQKEYVAKVVGVFPDGEQTVDANVNFNAREGRSTVEISGGAGEEPN-GKQALTRFQ 246

Query: 511  RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
            R  T+G  SIV C PVTGRTHQIRVHL+  G+PIANDELY + + C  +T  T+   K +
Sbjct: 247  RICTDGTHSIVLCKPVTGRTHQIRVHLKQAGYPIANDELYLSGNFCPRSTKGTNASKKIA 306

Query: 331  IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
               P+                  S+  ++ + DA   V                      
Sbjct: 307  PSDPD------------------SSAADHGSKDAGTDVE--------------------- 327

Query: 151  RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                        F++DP+CTNCPNL+P GYD  EEGLWLHC RY+GP+W+
Sbjct: 328  ------------FDIDPMCTNCPNLAPVGYDRDEEGLWLHCVRYTGPDWS 365


>ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [Fragaria vesca subsp.
            vesca]
          Length = 383

 Score =  424 bits (1089), Expect = e-116
 Identities = 211/406 (51%), Positives = 273/406 (67%)
 Frame = -1

Query: 1222 VWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYEYFV 1043
            VW++P NPP+  DY+F +G+R VRPY+FEFIA+VK RW+GK + DL+  EF+ R+ +Y++
Sbjct: 13   VWQSPANPPERKDYIFRNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFTDEFKGRNRDYYI 72

Query: 1042 EAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICKPAS 863
             AV+ GRI+VD +LV   +IV  +QK+SHF+HRHEPPV+   V +L    DVVTICKPAS
Sbjct: 73   SAVKCGRIQVDGQLVPVSFIVKPSQKISHFLHRHEPPVMTWDVKILQTEPDVVTICKPAS 132

Query: 862  VPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEIGAG 683
            VPVHPCGQYRKNTV+GIL+AEHGLAPLFPIHRLDRLVSGLLI A+++  AD FR++I  G
Sbjct: 133  VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSAAQADIFRQQIEGG 192

Query: 682  KVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFLRHS 503
             V K+YIA+V+G FPE+E  V+AN+ ++AREGRS+AE  +  +D+PT GK A T+F R S
Sbjct: 193  MVHKQYIARVIGEFPEEEQVVDANIDHNAREGRSSAEVGDSCSDAPTKGKTACTKFTRIS 252

Query: 502  TNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKSIEA 323
            +NGI SIV C PVTGRTHQIRVHLQ+ GHPIAND LY         +    D S + + A
Sbjct: 253  SNGIQSIVLCEPVTGRTHQIRVHLQHAGHPIANDMLYL--------SKHVSDRSAEGMGA 304

Query: 322  PESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSLRTV 143
                              R++A  ++  A  +  +                         
Sbjct: 305  -----------------DRAAANSDHSPASVVGKIKSTSH-------------------- 327

Query: 142  ERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNW 5
               E +   F++DP+CTNCP+L+P GYD HEE LWLHCFRYSGP W
Sbjct: 328  ---EDSSEDFSIDPMCTNCPSLAPKGYDYHEEALWLHCFRYSGPGW 370


>ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [Brachypodium distachyon]
          Length = 384

 Score =  421 bits (1083), Expect = e-115
 Identities = 209/410 (50%), Positives = 269/410 (65%)
 Frame = -1

Query: 1231 SGTVWENPQNPPKPDDYVFLDGKRLVRPYFFEFIAYVKQRWSGKKVEDLYAHEFRKRSYE 1052
            +G VW+ P NPP+  DY+F +G+R VRPY+FEFI++VK RW+GK + DL+  EF+ R YE
Sbjct: 8    AGIVWQTPANPPEAQDYIFRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYE 67

Query: 1051 YFVEAVRLGRIRVDEKLVSPGYIVNTTQKLSHFVHRHEPPVLAEPVAVLHNGNDVVTICK 872
            Y+V AV+ GR++VDE+ V   YIV ++QK+SHF+HRHEPPVL   + +L N  DVVT+CK
Sbjct: 68   YYVHAVKCGRLQVDEQTVPADYIVKSSQKISHFLHRHEPPVLGGNILILQNEVDVVTVCK 127

Query: 871  PASVPVHPCGQYRKNTVLGILEAEHGLAPLFPIHRLDRLVSGLLIFAKNSYTADKFREEI 692
            PASVPVHPCGQYRKNTV+GIL+AEHGL PLFP+HRLDRLVSGLLIFAK++  A+ FR++I
Sbjct: 128  PASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKSADRAECFRQQI 187

Query: 691  GAGKVQKEYIAKVVGIFPEKEVEVNANVAYDAREGRSTAEEVNDSNDSPTMGKNASTRFL 512
             A  +QKEY+AKVVG+FP+ E  V+ANV ++AREGRST E  +    +   GK A T+F 
Sbjct: 188  EANLLQKEYVAKVVGVFPDGEQTVDANVNFNAREGRSTVEVCDGPGKALPSGKQACTKFQ 247

Query: 511  RHSTNGIFSIVKCMPVTGRTHQIRVHLQYLGHPIANDELYCNVDLCSNNTAKTDDHSKKS 332
            R  T+G  SIV C PVTGRTHQIRVHL+++G+PIANDELY + + C  ++  T  +   S
Sbjct: 248  RIFTDGNHSIVLCKPVTGRTHQIRVHLKHIGYPIANDELYLSGNFCPRSSKGTGINRATS 307

Query: 331  IEAPESEAYPISHEHIVKKFSRSSAELNNHAADAIESVPKKQKLDGDLRLNESSYAVSSL 152
            +    S   P            SSAE                                  
Sbjct: 308  LACSLSSPDP-----------DSSAEAEE------------------------------- 325

Query: 151  RTVERVEKAERLFNLDPLCTNCPNLSPTGYDEHEEGLWLHCFRYSGPNWT 2
                        F +DP+CTNCPNL+P GYD  EE LWLHC RY+GP+W+
Sbjct: 326  ------------FGIDPMCTNCPNLAPVGYDGDEEALWLHCVRYTGPDWS 363


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