BLASTX nr result

ID: Ephedra26_contig00003012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00003012
         (450 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW70271.1| camouflage1 [Zea mays]                                  84   1e-14
ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [S...    84   1e-14
gb|ACF87707.1| unknown [Zea mays] gi|223947939|gb|ACN28053.1| un...    84   1e-14
gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor]    84   1e-14
sp|Q43082.1|HEM3_PEA RecName: Full=Porphobilinogen deaminase, ch...    84   2e-14
ref|NP_196445.1| Porphobilinogen deaminase [Arabidopsis thaliana...    83   3e-14
pdb|4HTG|A Chain A, Porphobilinogen Deaminase From Arabidopsis T...    83   3e-14
ref|XP_003635469.1| PREDICTED: porphobilinogen deaminase, chloro...    83   3e-14
ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arab...    83   3e-14
emb|CBI18797.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [S...    83   3e-14
ref|NP_001150986.1| LOC100284619 [Zea mays] gi|195643410|gb|ACG4...    83   3e-14
gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxyme...    83   3e-14
dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana]    83   3e-14
gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]     83   3e-14
ref|XP_006287933.1| hypothetical protein CARUB_v10001168mg [Caps...    83   4e-14
ref|XP_003570067.1| PREDICTED: porphobilinogen deaminase, chloro...    83   4e-14
gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxyme...    83   4e-14
gb|EXC33988.1| Porphobilinogen deaminase [Morus notabilis]             82   6e-14
gb|EOX99111.1| Hydroxymethylbilane synthase isoform 2 [Theobroma...    82   6e-14

>gb|AFW70271.1| camouflage1 [Zea mays]
          Length = 353

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
           KDG+C FRGLL+SP+GSKVFET+R G Y++D+M+ MGKDA  EL ++AGPGF D ++
Sbjct: 297 KDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKAGPGFFDSLQ 353


>ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
           gi|241931444|gb|EES04589.1| hypothetical protein
           SORBIDRAFT_04g004630 [Sorghum bicolor]
          Length = 356

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
           KDG+C FRGLLASP+GSKVFET+R G Y++D+M+ +GKDA  EL ++AGPGF D ++
Sbjct: 300 KDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFDSLQ 356


>gb|ACF87707.1| unknown [Zea mays] gi|223947939|gb|ACN28053.1| unknown [Zea mays]
           gi|413935719|gb|AFW70270.1| camouflage1 [Zea mays]
          Length = 356

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
           KDG+C FRGLL+SP+GSKVFET+R G Y++D+M+ MGKDA  EL ++AGPGF D ++
Sbjct: 300 KDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKAGPGFFDSLQ 356


>gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor]
          Length = 98

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
           KDG+C FRGLLASP+GSKVFET+R G Y++D+M+ +GKDA  EL ++AGPGF D ++
Sbjct: 42  KDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFDSLQ 98


>sp|Q43082.1|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
           AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
           AltName: Full=Pre-uroporphyrinogen synthase; Flags:
           Precursor gi|313724|emb|CAA51820.1| hydroxymethylbilane
           synthase [Pisum sativum]
          Length = 369

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/54 (68%), Positives = 47/54 (87%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           KDG+C FRGL+ASP+G++V ETSR GSYTY++M+ +GKDA  ELLSRAGPGF +
Sbjct: 315 KDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSRAGPGFFN 368


>ref|NP_196445.1| Porphobilinogen deaminase [Arabidopsis thaliana]
           gi|2495179|sp|Q43316.1|HEM3_ARATH RecName:
           Full=Porphobilinogen deaminase, chloroplastic;
           Short=PBG; AltName: Full=Hydroxymethylbilane synthase;
           Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase;
           AltName: Full=Protein RUGOSA1; Flags: Precursor
           gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10
           [Arabidopsis thaliana] gi|313150|emb|CAA51941.1|
           hydroxymethylbilane synthase [Arabidopsis thaliana]
           gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase
           [Arabidopsis thaliana] gi|10178270|emb|CAC08328.1|
           hydroxymethylbilane synthase [Arabidopsis thaliana]
           gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane
           synthase [Arabidopsis thaliana]
           gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane
           synthase [Arabidopsis thaliana]
           gi|332003894|gb|AED91277.1| Porphobilinogen deaminase
           [Arabidopsis thaliana]
          Length = 382

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
           ++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA  ELLSRAGPGF
Sbjct: 328 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379


>pdb|4HTG|A Chain A, Porphobilinogen Deaminase From Arabidopsis Thaliana
          Length = 320

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
           ++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA  ELLSRAGPGF
Sbjct: 266 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 317


>ref|XP_003635469.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 37/54 (68%), Positives = 45/54 (83%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           +DG+C F+GL+ASP+G+KV ETSRKG Y  ++MI MGKDA  ELLSRAGPGF D
Sbjct: 258 EDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSRAGPGFFD 311


>ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
           lyrata] gi|297319187|gb|EFH49609.1| hypothetical protein
           ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
           ++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA  ELLSRAGPGF
Sbjct: 328 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379


>emb|CBI18797.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 37/54 (68%), Positives = 45/54 (83%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           +DG+C F+GL+ASP+G+KV ETSRKG Y  ++MI MGKDA  ELLSRAGPGF D
Sbjct: 274 EDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSRAGPGFFD 327


>ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
           gi|241931445|gb|EES04590.1| hypothetical protein
           SORBIDRAFT_04g004640 [Sorghum bicolor]
          Length = 340

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           KDGSC FRGLLASP+GSKV+ET+R G Y++D+M+ MGKDA  EL ++AGPGF D
Sbjct: 286 KDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339


>ref|NP_001150986.1| LOC100284619 [Zea mays] gi|195643410|gb|ACG41173.1| porphobilinogen
           deaminase [Zea mays]
          Length = 356

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = -1

Query: 447 DGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
           DG+C FRGLLASP GSKVFET+R G Y++D+M+ MGKDA  EL ++AGPGF D ++
Sbjct: 301 DGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKAGPGFFDSLQ 356


>gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
           synthase) (pre-uroporphyrinogen synthase), putative
           [Musa acuminata]
          Length = 328

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           KDGSC FRGLLASP+GSKV+ET+R G Y++D+M+ MGKDA  EL ++AGPGF D
Sbjct: 274 KDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 327


>dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
          Length = 130

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
           ++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA  ELLSRAGPGF
Sbjct: 76  EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 127


>gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
          Length = 382

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
           ++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA  ELLSRAGPGF
Sbjct: 328 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379


>ref|XP_006287933.1| hypothetical protein CARUB_v10001168mg [Capsella rubella]
           gi|482556639|gb|EOA20831.1| hypothetical protein
           CARUB_v10001168mg [Capsella rubella]
          Length = 382

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 36/52 (69%), Positives = 45/52 (86%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
           ++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA  ELLSRAGPGF
Sbjct: 328 EEGNCVFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379


>ref|XP_003570067.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like
           [Brachypodium distachyon]
          Length = 357

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 36/54 (66%), Positives = 47/54 (87%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           KDG+C FRGLLASP+GS V+ETSR G+YT+D+M+++G+DA  EL S+AGPGF D
Sbjct: 301 KDGNCSFRGLLASPDGSIVYETSRSGTYTFDDMVALGQDAGYELKSKAGPGFFD 354


>gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
           synthase) (pre-uroporphyrinogen synthase), putative
           [Musa acuminata]
          Length = 426

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 35/57 (61%), Positives = 48/57 (84%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
           +DG+C FRGLLASP+GSKVFET+R G Y++D+M+ +GKDA  EL ++AGPGF D ++
Sbjct: 370 EDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFDSLQ 426


>gb|EXC33988.1| Porphobilinogen deaminase [Morus notabilis]
          Length = 380

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 35/54 (64%), Positives = 46/54 (85%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           +DG+C F+GL+ASP+G++V ETSRKG Y +++M+ MGKDA  ELLSRAGPGF D
Sbjct: 326 EDGNCIFKGLVASPDGTRVLETSRKGPYAFEDMMKMGKDAGEELLSRAGPGFFD 379


>gb|EOX99111.1| Hydroxymethylbilane synthase isoform 2 [Theobroma cacao]
          Length = 286

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 35/54 (64%), Positives = 45/54 (83%)
 Frame = -1

Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
           +DG+C F+GL+ASP+G +V ETSRKG Y +++M+ MGKDA  ELLSRAGPGF D
Sbjct: 232 EDGNCVFKGLVASPDGKRVLETSRKGQYAFEDMVMMGKDAGKELLSRAGPGFFD 285


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