BLASTX nr result
ID: Ephedra26_contig00003012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00003012
(450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW70271.1| camouflage1 [Zea mays] 84 1e-14
ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [S... 84 1e-14
gb|ACF87707.1| unknown [Zea mays] gi|223947939|gb|ACN28053.1| un... 84 1e-14
gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor] 84 1e-14
sp|Q43082.1|HEM3_PEA RecName: Full=Porphobilinogen deaminase, ch... 84 2e-14
ref|NP_196445.1| Porphobilinogen deaminase [Arabidopsis thaliana... 83 3e-14
pdb|4HTG|A Chain A, Porphobilinogen Deaminase From Arabidopsis T... 83 3e-14
ref|XP_003635469.1| PREDICTED: porphobilinogen deaminase, chloro... 83 3e-14
ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arab... 83 3e-14
emb|CBI18797.3| unnamed protein product [Vitis vinifera] 83 3e-14
ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [S... 83 3e-14
ref|NP_001150986.1| LOC100284619 [Zea mays] gi|195643410|gb|ACG4... 83 3e-14
gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxyme... 83 3e-14
dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana] 83 3e-14
gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana] 83 3e-14
ref|XP_006287933.1| hypothetical protein CARUB_v10001168mg [Caps... 83 4e-14
ref|XP_003570067.1| PREDICTED: porphobilinogen deaminase, chloro... 83 4e-14
gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxyme... 83 4e-14
gb|EXC33988.1| Porphobilinogen deaminase [Morus notabilis] 82 6e-14
gb|EOX99111.1| Hydroxymethylbilane synthase isoform 2 [Theobroma... 82 6e-14
>gb|AFW70271.1| camouflage1 [Zea mays]
Length = 353
Score = 84.3 bits (207), Expect = 1e-14
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
KDG+C FRGLL+SP+GSKVFET+R G Y++D+M+ MGKDA EL ++AGPGF D ++
Sbjct: 297 KDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKAGPGFFDSLQ 353
>ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
gi|241931444|gb|EES04589.1| hypothetical protein
SORBIDRAFT_04g004630 [Sorghum bicolor]
Length = 356
Score = 84.3 bits (207), Expect = 1e-14
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
KDG+C FRGLLASP+GSKVFET+R G Y++D+M+ +GKDA EL ++AGPGF D ++
Sbjct: 300 KDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFDSLQ 356
>gb|ACF87707.1| unknown [Zea mays] gi|223947939|gb|ACN28053.1| unknown [Zea mays]
gi|413935719|gb|AFW70270.1| camouflage1 [Zea mays]
Length = 356
Score = 84.3 bits (207), Expect = 1e-14
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
KDG+C FRGLL+SP+GSKVFET+R G Y++D+M+ MGKDA EL ++AGPGF D ++
Sbjct: 300 KDGNCSFRGLLSSPDGSKVFETARSGPYSFDDMVEMGKDAGHELKAKAGPGFFDSLQ 356
>gb|ABB03720.1| putative porphobilinogen deaminase [Sorghum bicolor]
Length = 98
Score = 84.3 bits (207), Expect = 1e-14
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
KDG+C FRGLLASP+GSKVFET+R G Y++D+M+ +GKDA EL ++AGPGF D ++
Sbjct: 42 KDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFDSLQ 98
>sp|Q43082.1|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor gi|313724|emb|CAA51820.1| hydroxymethylbilane
synthase [Pisum sativum]
Length = 369
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/54 (68%), Positives = 47/54 (87%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
KDG+C FRGL+ASP+G++V ETSR GSYTY++M+ +GKDA ELLSRAGPGF +
Sbjct: 315 KDGNCLFRGLVASPDGTRVLETSRIGSYTYEDMMKIGKDAGEELLSRAGPGFFN 368
>ref|NP_196445.1| Porphobilinogen deaminase [Arabidopsis thaliana]
gi|2495179|sp|Q43316.1|HEM3_ARATH RecName:
Full=Porphobilinogen deaminase, chloroplastic;
Short=PBG; AltName: Full=Hydroxymethylbilane synthase;
Short=HMBS; AltName: Full=Pre-uroporphyrinogen synthase;
AltName: Full=Protein RUGOSA1; Flags: Precursor
gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10
[Arabidopsis thaliana] gi|313150|emb|CAA51941.1|
hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase
[Arabidopsis thaliana] gi|10178270|emb|CAC08328.1|
hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane
synthase [Arabidopsis thaliana]
gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane
synthase [Arabidopsis thaliana]
gi|332003894|gb|AED91277.1| Porphobilinogen deaminase
[Arabidopsis thaliana]
Length = 382
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA ELLSRAGPGF
Sbjct: 328 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379
>pdb|4HTG|A Chain A, Porphobilinogen Deaminase From Arabidopsis Thaliana
Length = 320
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA ELLSRAGPGF
Sbjct: 266 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 317
>ref|XP_003635469.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
+DG+C F+GL+ASP+G+KV ETSRKG Y ++MI MGKDA ELLSRAGPGF D
Sbjct: 258 EDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSRAGPGFFD 311
>ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata] gi|297319187|gb|EFH49609.1| hypothetical protein
ARALYDRAFT_908776 [Arabidopsis lyrata subsp. lyrata]
Length = 382
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA ELLSRAGPGF
Sbjct: 328 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379
>emb|CBI18797.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
+DG+C F+GL+ASP+G+KV ETSRKG Y ++MI MGKDA ELLSRAGPGF D
Sbjct: 274 EDGNCIFKGLVASPDGTKVLETSRKGPYALEDMIKMGKDAGEELLSRAGPGFFD 327
>ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
gi|241931445|gb|EES04590.1| hypothetical protein
SORBIDRAFT_04g004640 [Sorghum bicolor]
Length = 340
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
KDGSC FRGLLASP+GSKV+ET+R G Y++D+M+ MGKDA EL ++AGPGF D
Sbjct: 286 KDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 339
>ref|NP_001150986.1| LOC100284619 [Zea mays] gi|195643410|gb|ACG41173.1| porphobilinogen
deaminase [Zea mays]
Length = 356
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = -1
Query: 447 DGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
DG+C FRGLLASP GSKVFET+R G Y++D+M+ MGKDA EL ++AGPGF D ++
Sbjct: 301 DGNCSFRGLLASPGGSKVFETTRSGPYSFDDMVEMGKDAGHELKAKAGPGFFDSLQ 356
>gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 328
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
KDGSC FRGLLASP+GSKV+ET+R G Y++D+M+ MGKDA EL ++AGPGF D
Sbjct: 274 KDGSCSFRGLLASPDGSKVYETTRIGPYSFDDMVEMGKDAGHELKAKAGPGFYD 327
>dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 130
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA ELLSRAGPGF
Sbjct: 76 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 127
>gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 382
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA ELLSRAGPGF
Sbjct: 328 EEGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379
>ref|XP_006287933.1| hypothetical protein CARUB_v10001168mg [Capsella rubella]
gi|482556639|gb|EOA20831.1| hypothetical protein
CARUB_v10001168mg [Capsella rubella]
Length = 382
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGF 295
++G+C FRGL+ASP+G+KV ETSRKG Y Y++M+ MGKDA ELLSRAGPGF
Sbjct: 328 EEGNCVFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAGPGF 379
>ref|XP_003570067.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like
[Brachypodium distachyon]
Length = 357
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/54 (66%), Positives = 47/54 (87%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
KDG+C FRGLLASP+GS V+ETSR G+YT+D+M+++G+DA EL S+AGPGF D
Sbjct: 301 KDGNCSFRGLLASPDGSIVYETSRSGTYTFDDMVALGQDAGYELKSKAGPGFFD 354
>gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 426
Score = 82.8 bits (203), Expect = 4e-14
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLDMIK 280
+DG+C FRGLLASP+GSKVFET+R G Y++D+M+ +GKDA EL ++AGPGF D ++
Sbjct: 370 EDGNCSFRGLLASPDGSKVFETTRSGPYSFDDMVELGKDAGHELKAKAGPGFFDSLQ 426
>gb|EXC33988.1| Porphobilinogen deaminase [Morus notabilis]
Length = 380
Score = 82.4 bits (202), Expect = 6e-14
Identities = 35/54 (64%), Positives = 46/54 (85%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
+DG+C F+GL+ASP+G++V ETSRKG Y +++M+ MGKDA ELLSRAGPGF D
Sbjct: 326 EDGNCIFKGLVASPDGTRVLETSRKGPYAFEDMMKMGKDAGEELLSRAGPGFFD 379
>gb|EOX99111.1| Hydroxymethylbilane synthase isoform 2 [Theobroma cacao]
Length = 286
Score = 82.4 bits (202), Expect = 6e-14
Identities = 35/54 (64%), Positives = 45/54 (83%)
Frame = -1
Query: 450 KDGSCFFRGLLASPNGSKVFETSRKGSYTYDEMISMGKDAAAELLSRAGPGFLD 289
+DG+C F+GL+ASP+G +V ETSRKG Y +++M+ MGKDA ELLSRAGPGF D
Sbjct: 232 EDGNCVFKGLVASPDGKRVLETSRKGQYAFEDMVMMGKDAGKELLSRAGPGFFD 285