BLASTX nr result
ID: Ephedra26_contig00002868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00002868
(876 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22541.1| unknown [Picea sitchensis] 171 3e-40
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 168 3e-39
gb|AFK45150.1| unknown [Lotus japonicus] 167 4e-39
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 167 4e-39
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo... 167 4e-39
gb|ACU13643.1| unknown [Glycine max] 167 4e-39
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo... 166 1e-38
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g... 166 1e-38
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g... 166 1e-38
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A... 165 2e-38
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo... 165 2e-38
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo... 165 2e-38
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ... 165 2e-38
gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus pe... 164 3e-38
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo... 164 4e-38
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]... 163 7e-38
ref|XP_001761112.1| predicted protein [Physcomitrella patens] gi... 163 7e-38
ref|XP_004299869.1| PREDICTED: probable small nuclear ribonucleo... 163 9e-38
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays] 163 9e-38
gb|EMJ25030.1| hypothetical protein PRUPE_ppa014039mg [Prunus pe... 162 1e-37
>gb|ABK22541.1| unknown [Picea sitchensis]
Length = 84
Score = 171 bits (433), Expect = 3e-40
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GEVLIRCNNVLYLRGVPEDE+ EE
Sbjct: 61 GEVLIRCNNVLYLRGVPEDEDIEE 84
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
product [Vitis vinifera]
Length = 88
Score = 168 bits (425), Expect = 3e-39
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVP+NPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA++EEYIDGQFTGNL
Sbjct: 1 MATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE EE
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEE 84
>gb|AFK45150.1| unknown [Lotus japonicus]
Length = 88
Score = 167 bits (424), Expect = 4e-39
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIED 84
>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|561028116|gb|ESW26756.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
Length = 88
Score = 167 bits (424), Expect = 4e-39
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIED 84
>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|255628071|gb|ACU14380.1| unknown [Glycine max]
Length = 88
Score = 167 bits (424), Expect = 4e-39
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIED 84
>gb|ACU13643.1| unknown [Glycine max]
Length = 88
Score = 167 bits (424), Expect = 4e-39
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIED 84
>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
arietinum]
Length = 88
Score = 166 bits (419), Expect = 1e-38
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+G FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIED 84
>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
gi|77552372|gb|ABA95169.1| small nuclear
ribonucleoprotein F, putative, expressed [Oryza sativa
Japonica Group] gi|113645618|dbj|BAF28759.1|
Os11g0657300 [Oryza sativa Japonica Group]
gi|215693012|dbj|BAG88432.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186140|gb|EEC68567.1| hypothetical protein
OsI_36896 [Oryza sativa Indica Group]
gi|222616369|gb|EEE52501.1| hypothetical protein
OsJ_34703 [Oryza sativa Japonica Group]
Length = 86
Score = 166 bits (419), Expect = 1e-38
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPED E E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDAEIED 84
>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
gi|573918646|ref|XP_006646960.1| PREDICTED: probable
small nuclear ribonucleoprotein F-like [Oryza
brachyantha] gi|50252055|dbj|BAD27986.1| putative small
nuclear ribonucleoprotein polypeptide F [Oryza sativa
Japonica Group] gi|113535599|dbj|BAF07982.1|
Os02g0177500 [Oryza sativa Japonica Group]
Length = 86
Score = 166 bits (419), Expect = 1e-38
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPED E E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDTEIED 84
>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
gi|548851446|gb|ERN09722.1| hypothetical protein
AMTR_s00029p00226370 [Amborella trichopoda]
Length = 86
Score = 165 bits (417), Expect = 2e-38
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQ +GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEVED 84
>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
probable small nuclear ribonucleoprotein F-like [Setaria
italica]
Length = 86
Score = 165 bits (417), Expect = 2e-38
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNV+YLRGVPED E E+
Sbjct: 61 GEILIRCNNVMYLRGVPEDAEIED 84
>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 165 bits (417), Expect = 2e-38
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNV+YLRGVPED E E+
Sbjct: 61 GEILIRCNNVMYLRGVPEDTEIED 84
>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear
ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago
truncatula]
Length = 88
Score = 165 bits (417), Expect = 2e-38
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+G FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLY+RGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYMRGVPEDEEIED 84
>gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus persica]
Length = 91
Score = 164 bits (416), Expect = 3e-38
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA+TEEYIDGQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIED 84
>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 164 bits (415), Expect = 4e-38
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNV+Y+RGVPED E E+
Sbjct: 61 GEILIRCNNVMYMRGVPEDTEIED 84
>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
gi|194696080|gb|ACF82124.1| unknown [Zea mays]
gi|195609436|gb|ACG26548.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195622854|gb|ACG33257.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195639814|gb|ACG39375.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413926377|gb|AFW66309.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935832|gb|AFW70383.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935833|gb|AFW70384.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 86
Score = 163 bits (413), Expect = 7e-38
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYL SVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNV+YLRGVPED E E+
Sbjct: 61 GEILIRCNNVMYLRGVPEDAEIED 84
>ref|XP_001761112.1| predicted protein [Physcomitrella patens]
gi|162687798|gb|EDQ74179.1| predicted protein
[Physcomitrella patens]
Length = 87
Score = 163 bits (413), Expect = 7e-38
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLN+LTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEE++DG FTGNL
Sbjct: 1 MATIPVNPKPFLNDLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEFVDGAFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GEVLIRCNNV+YLRGVPEDE+A E
Sbjct: 61 GEVLIRCNNVMYLRGVPEDEDAAE 84
>ref|XP_004299869.1| PREDICTED: probable small nuclear ribonucleoprotein F-like isoform
1 [Fragaria vesca subsp. vesca]
Length = 88
Score = 163 bits (412), Expect = 9e-38
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGK V VKLKWGMEYKG+LVSVDSYMNLQLA+TEEYIDGQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKTVFVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE E+
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIED 84
>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
Length = 86
Score = 163 bits (412), Expect = 9e-38
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MATVPVNPKPFLNNLTGKP+IVKLKWGMEYKGYL SVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNV+YLRGVPED E E+
Sbjct: 61 GEILIRCNNVMYLRGVPEDAEIED 84
>gb|EMJ25030.1| hypothetical protein PRUPE_ppa014039mg [Prunus persica]
Length = 90
Score = 162 bits (411), Expect = 1e-37
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +1
Query: 268 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 447
MAT+PVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA+TEEYIDGQ TGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQSTGNL 60
Query: 448 GEVLIRCNNVLYLRGVPEDEEAEE 519
GE+LIRCNNVLYLRGVPEDEE EE
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEE 84