BLASTX nr result

ID: Ephedra26_contig00002719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00002719
         (836 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001782842.1| predicted protein [Physcomitrella patens] gi...    62   3e-07
ref|XP_006444054.1| hypothetical protein CICLE_v10020348mg [Citr...    61   4e-07
ref|XP_004493674.1| PREDICTED: pre-mRNA-splicing factor 18-like ...    59   2e-06
ref|XP_006349682.1| PREDICTED: pre-mRNA-splicing factor 18-like ...    59   3e-06
ref|XP_004247169.1| PREDICTED: pre-mRNA-splicing factor 18-like ...    59   3e-06
emb|CBI28698.3| unnamed protein product [Vitis vinifera]               57   8e-06
ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...    57   8e-06

>ref|XP_001782842.1| predicted protein [Physcomitrella patens]
           gi|162665680|gb|EDQ52356.1| predicted protein
           [Physcomitrella patens]
          Length = 416

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 33/43 (76%), Positives = 35/43 (81%)
 Frame = -3

Query: 834 PSLPSKSVEFNSLANGSDLQSLLLEENLKHSSDNAEERLRLTA 706
           PS+PSKSVEFNSLANGSDL+SLL EE  K  S  AEERLRL A
Sbjct: 368 PSMPSKSVEFNSLANGSDLKSLLTEEKNKTGSVAAEERLRLLA 410


>ref|XP_006444054.1| hypothetical protein CICLE_v10020348mg [Citrus clementina]
           gi|568852081|ref|XP_006479709.1| PREDICTED:
           pre-mRNA-splicing factor 18-like [Citrus sinensis]
           gi|557546316|gb|ESR57294.1| hypothetical protein
           CICLE_v10020348mg [Citrus clementina]
          Length = 416

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -3

Query: 834 PSLPSKSVEFNSLANGSDLQSLLLEENLKHSSDNAEERLRL 712
           P++PSK+VEFNSLANGSDLQSLL EE +  S+ ++EERLRL
Sbjct: 369 PTMPSKAVEFNSLANGSDLQSLLAEETISGSNQSSEERLRL 409


>ref|XP_004493674.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cicer arietinum]
          Length = 411

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = -3

Query: 834 PSLPSKSVEFNSLANGSDLQSLLLEENLKHSSDNAEERLRLTA 706
           P+LPSK+VEFNSLANGSDLQSLL EE     +  +EERLR+ A
Sbjct: 364 PTLPSKAVEFNSLANGSDLQSLLAEERFSGVNQTSEERLRIMA 406


>ref|XP_006349682.1| PREDICTED: pre-mRNA-splicing factor 18-like [Solanum tuberosum]
          Length = 413

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -3

Query: 834 PSLPSKSVEFNSLANGSDLQSLLLEENLKHSSDNAEERLRL 712
           P++PSK+VEFNSLANGSDLQSLL EE     S  +EERLR+
Sbjct: 370 PAMPSKAVEFNSLANGSDLQSLLAEEGTSGGSQTSEERLRI 410


>ref|XP_004247169.1| PREDICTED: pre-mRNA-splicing factor 18-like [Solanum lycopersicum]
          Length = 413

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -3

Query: 834 PSLPSKSVEFNSLANGSDLQSLLLEENLKHSSDNAEERLRL 712
           P++PSK+VEFNSLANGSDLQSLL EE     S  +EERLR+
Sbjct: 370 PAMPSKAVEFNSLANGSDLQSLLAEEGTSGGSQTSEERLRI 410


>emb|CBI28698.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -3

Query: 834 PSLPSKSVEFNSLANGSDLQSLLLEENLKHSSDNAEERLRLTA 706
           P++PSK+VEFNSLANGSDLQSLL EE     +  +EERL L A
Sbjct: 112 PTMPSKAVEFNSLANGSDLQSLLAEERFSGGNQASEERLHLMA 154


>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -3

Query: 834 PSLPSKSVEFNSLANGSDLQSLLLEENLKHSSDNAEERLRLTA 706
           P++PSK+VEFNSLANGSDLQSLL EE     +  +EERL L A
Sbjct: 365 PTMPSKAVEFNSLANGSDLQSLLAEERFSGGNQASEERLHLMA 407


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