BLASTX nr result

ID: Ephedra26_contig00002680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00002680
         (450 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307905.2| hypothetical protein POPTR_0006s01810g, part...    56   4e-06
dbj|BAK03678.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
gb|ABK96527.1| unknown [Populus trichocarpa x Populus deltoides]       56   4e-06
gb|ABK21006.1| unknown [Picea sitchensis] gi|116784300|gb|ABK232...    56   6e-06
ref|XP_006415776.1| hypothetical protein EUTSA_v10009274mg [Eutr...    55   1e-05
ref|XP_004962894.1| PREDICTED: stress-associated endoplasmic ret...    55   1e-05
gb|EMJ25136.1| hypothetical protein PRUPE_ppa014280mg [Prunus pe...    55   1e-05
ref|XP_004239223.1| PREDICTED: stress-associated endoplasmic ret...    55   1e-05
ref|XP_004239221.1| PREDICTED: stress-associated endoplasmic ret...    55   1e-05
gb|AAF99731.1|AC004557_10 F17L21.12 [Arabidopsis thaliana]             55   1e-05
gb|AAW23954.1| predicted membrane protein 2 [Brassica juncea]          55   1e-05
ref|NP_564277.1| ribosome associated membrane protein RAMP4 [Ara...    55   1e-05
gb|AFW60273.1| hypothetical protein ZEAMMB73_043156, partial [Ze...    55   1e-05
ref|XP_003576008.1| PREDICTED: stress-associated endoplasmic ret...    55   1e-05
ref|XP_002299312.1| hypothetical protein POPTR_0001s13750g [Popu...    55   1e-05

>ref|XP_002307905.2| hypothetical protein POPTR_0006s01810g, partial [Populus
           trichocarpa] gi|550335246|gb|EEE91428.2| hypothetical
           protein POPTR_0006s01810g, partial [Populus trichocarpa]
          Length = 102

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTASSG MA
Sbjct: 73  GPILLGFFVFVVIGSSLFQIIRTASSGGMA 102


>dbj|BAK03678.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 68

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFF+FVVIGSSLFQIIRTASSG MA
Sbjct: 39  GPIVLGFFIFVVIGSSLFQIIRTASSGGMA 68


>gb|ABK96527.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 68

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTASSG MA
Sbjct: 39  GPILLGFFVFVVIGSSLFQIIRTASSGGMA 68


>gb|ABK21006.1| unknown [Picea sitchensis] gi|116784300|gb|ABK23293.1| unknown
           [Picea sitchensis] gi|116789754|gb|ABK25369.1| unknown
           [Picea sitchensis] gi|224286489|gb|ACN40951.1| unknown
           [Picea sitchensis]
          Length = 68

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSS+FQIIRTASSG MA
Sbjct: 39  GPIVLGFFVFVVIGSSIFQIIRTASSGGMA 68


>ref|XP_006415776.1| hypothetical protein EUTSA_v10009274mg [Eutrema salsugineum]
           gi|557093547|gb|ESQ34129.1| hypothetical protein
           EUTSA_v10009274mg [Eutrema salsugineum]
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 39  GPILLGFFVFVVIGSSLFQIIRTATSGGMA 68


>ref|XP_004962894.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           [Setaria italica]
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFF+FVVIGSSLFQIIRTA+SG MA
Sbjct: 39  GPIVLGFFIFVVIGSSLFQIIRTATSGGMA 68


>gb|EMJ25136.1| hypothetical protein PRUPE_ppa014280mg [Prunus persica]
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 39  GPILLGFFVFVVIGSSLFQIIRTATSGGMA 68


>ref|XP_004239223.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           isoform 4 [Solanum lycopersicum]
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 39  GPILLGFFVFVVIGSSLFQIIRTATSGGMA 68


>ref|XP_004239221.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           isoform 2 [Solanum lycopersicum]
          Length = 88

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 59  GPILLGFFVFVVIGSSLFQIIRTATSGGMA 88


>gb|AAF99731.1|AC004557_10 F17L21.12 [Arabidopsis thaliana]
          Length = 77

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 48  GPILLGFFVFVVIGSSLFQIIRTATSGGMA 77


>gb|AAW23954.1| predicted membrane protein 2 [Brassica juncea]
          Length = 62

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 33  GPILLGFFVFVVIGSSLFQIIRTATSGGMA 62


>ref|NP_564277.1| ribosome associated membrane protein RAMP4 [Arabidopsis thaliana]
           gi|18396300|ref|NP_564279.1| ribosome associated
           membrane protein RAMP4 [Arabidopsis thaliana]
           gi|297845682|ref|XP_002890722.1| hypothetical protein
           ARALYDRAFT_472929 [Arabidopsis lyrata subsp. lyrata]
           gi|297851160|ref|XP_002893461.1| hypothetical protein
           ARALYDRAFT_472931 [Arabidopsis lyrata subsp. lyrata]
           gi|565491706|ref|XP_006303492.1| hypothetical protein
           CARUB_v10010819mg [Capsella rubella]
           gi|27754570|gb|AAO22732.1| unknown protein [Arabidopsis
           thaliana] gi|28393875|gb|AAO42345.1| unknown protein
           [Arabidopsis thaliana] gi|28416573|gb|AAO42817.1|
           At1g27330 [Arabidopsis thaliana]
           gi|110743217|dbj|BAE99499.1| hypothetical protein
           [Arabidopsis thaliana] gi|297336564|gb|EFH66981.1|
           hypothetical protein ARALYDRAFT_472929 [Arabidopsis
           lyrata subsp. lyrata] gi|297339303|gb|EFH69720.1|
           hypothetical protein ARALYDRAFT_472931 [Arabidopsis
           lyrata subsp. lyrata] gi|332192686|gb|AEE30807.1|
           ribosome associated membrane protein RAMP4 [Arabidopsis
           thaliana] gi|332192688|gb|AEE30809.1| ribosome
           associated membrane protein RAMP4 [Arabidopsis thaliana]
           gi|482572203|gb|EOA36390.1| hypothetical protein
           CARUB_v10010819mg [Capsella rubella]
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 39  GPILLGFFVFVVIGSSLFQIIRTATSGGMA 68


>gb|AFW60273.1| hypothetical protein ZEAMMB73_043156, partial [Zea mays]
          Length = 113

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GP+ LGFFVFVVIGSSLFQIIRTA+SG MA
Sbjct: 84  GPVVLGFFVFVVIGSSLFQIIRTATSGGMA 113


>ref|XP_003576008.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           [Brachypodium distachyon]
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GPI LGFF+FVVIGSSLFQIIRTA+SG MA
Sbjct: 39  GPIVLGFFIFVVIGSSLFQIIRTATSGGMA 68


>ref|XP_002299312.1| hypothetical protein POPTR_0001s13750g [Populus trichocarpa]
           gi|118482569|gb|ABK93205.1| unknown [Populus
           trichocarpa] gi|118485239|gb|ABK94479.1| unknown
           [Populus trichocarpa] gi|222846570|gb|EEE84117.1|
           hypothetical protein POPTR_0001s13750g [Populus
           trichocarpa]
          Length = 68

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 448 GPIALGFFVFVVIGSSLFQIIRTASSGAMA 359
           GP+ LGFF+FVVIGSSLFQIIRTASSG MA
Sbjct: 39  GPLLLGFFIFVVIGSSLFQIIRTASSGGMA 68


Top