BLASTX nr result

ID: Ephedra26_contig00002475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00002475
         (642 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCG34067.1| dehydrin [Pinus pinaster] gi|425904995|emb|CCH03...    56   8e-06

>emb|CCG34067.1| dehydrin [Pinus pinaster] gi|425904995|emb|CCH03648.1| dehydrin
           [Pinus pinaster]
          Length = 238

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 55/176 (31%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
 Frame = +1

Query: 10  HQQAPLGN-AEHHQETGPAAASVNTTEHIHSAHEDPLKHGS---DGG----GMMSKIKEK 165
           H++ P    AE  + TG       T     S+  D    G    +GG    G   K KEK
Sbjct: 58  HEEQPTPEEAEQQKHTGLMGKLHRTNSSSSSSSSDEEGEGGKKKEGGRKKKGSKDKSKEK 117

Query: 166 LPGQQTGPA----GVSVNSTEHIRSIHEEPPKHXXXXXXXXIMSKLHRSDNSTTASGEE- 330
           LPG    P+    G     T  +  I E+ P H             H SD+     G+E 
Sbjct: 118 LPGAGQHPSDQCGGKEEKKTGLLDKIKEKIPGHQEKLSGGGT----HSSDD---CGGKEE 170

Query: 331 ---GMIGKIKEKLPGGXXXXXXXXXXXXXXXHAGEGVKKEGFVDKIKDKLPGHKKE 489
              G++ KIKEK+PG                H GE  KK G + KIK+KLPGHK +
Sbjct: 171 KKTGLLDKIKEKIPG-HQEKLPGDGKHSSDEHRGEEEKKLGVLGKIKEKLPGHKNQ 225


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