BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00002456
         (1758 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [A...   656   0.0  
gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-l...   632   e-178
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...   629   e-178
emb|CBI35690.3| unnamed protein product [Vitis vinifera]              629   e-178
ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal doma...   622   e-175
ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal doma...   622   e-175
gb|EOY28304.1| C-terminal domain phosphatase-like 1 isoform 3 [T...   619   e-174
gb|EOY28303.1| C-terminal domain phosphatase-like 1 isoform 2 [T...   619   e-174
gb|EOY28302.1| C-terminal domain phosphatase-like 1 isoform 1 [T...   619   e-174
gb|EMJ15747.1| hypothetical protein PRUPE_ppa000988mg [Prunus pe...   617   e-174
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   617   e-174
ref|XP_004293503.1| PREDICTED: RNA polymerase II C-terminal doma...   615   e-173
ref|XP_006347069.1| PREDICTED: RNA polymerase II C-terminal doma...   615   e-173
ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Popu...   615   e-173
ref|XP_006467834.1| PREDICTED: RNA polymerase II C-terminal doma...   613   e-173
ref|XP_004232844.1| PREDICTED: RNA polymerase II C-terminal doma...   613   e-173
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...   613   e-173
ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal doma...   611   e-172
ref|XP_006449302.1| hypothetical protein CICLE_v10014168mg [Citr...   604   e-170
ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Popu...   603   e-170

>ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [Amborella trichopoda]
            gi|548832426|gb|ERM95222.1| hypothetical protein
            AMTR_s00009p00267690 [Amborella trichopoda]
          Length = 942

 Score =  656 bits (1693), Expect = 0.0
 Identities = 342/581 (58%), Positives = 424/581 (72%), Gaps = 4/581 (0%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFI 1575
            S+VYHGD+LLGE  + P+ +  L +  I   IR+SHLS  S+RCPPLAVLHTI+  GV  
Sbjct: 4    SAVYHGDSLLGEAEVYPEREY-LNLETITKEIRISHLSLPSERCPPLAVLHTIASCGVCF 62

Query: 1574 KVESKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVSS 1395
            K+E K     S L  LY TCLK+ K A++PL   EL LVAM SK++ +   CFWG+ +S 
Sbjct: 63   KLEFKSQSGESPLFSLYNTCLKDNKTAVMPLGAEELHLVAMASKNKFELFSCFWGFRISL 122

Query: 1394 VLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVAE 1215
             LYN+CL MLNLRCL+IVFDLDETLIVANT+RSFED+IDA+QRK+S+E DP RV GM+AE
Sbjct: 123  GLYNSCLAMLNLRCLSIVFDLDETLIVANTMRSFEDRIDALQRKISSEPDPQRVSGMLAE 182

Query: 1214 VRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIFT 1035
            V+RYQ+D+ +LKQY ++DQ+V+ NG V K   E +PP SD  Q+I RPLIR+Q++N+I T
Sbjct: 183  VKRYQDDKTILKQYVESDQVVE-NGKVFKLQNEIVPPLSDSHQAIVRPLIRLQERNIILT 241

Query: 1034 RINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESRL 855
            RINP IRDTSVLVR+RPAWE+LR+YLT KGRKRFEVY+CTM+ERDYALEMWRLLD E+ L
Sbjct: 242  RINPVIRDTSVLVRMRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEANL 301

Query: 854  INHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPFA 675
            IN  +LLDR++CVK GSRK+L  VF+ G CHPK+AMVIDDRLKVW+D+DQPRVHVVPP+A
Sbjct: 302  INPRQLLDRIVCVKSGSRKSLLTVFQDGICHPKMAMVIDDRLKVWDDKDQPRVHVVPPYA 361

Query: 674  PYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPDV 495
            PYYAPQAE +  VPVL VARNVACNVR GFFKDFD+VLL+++ +V YE ++  LP  PD 
Sbjct: 362  PYYAPQAEVNNAVPVLYVARNVACNVRSGFFKDFDDVLLKRIPDVFYEDDISCLPSAPDS 421

Query: 494  SNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVRP 324
            SNYLL++DD   LN NKDLP+PEGM DSE+E++L        ++P   S+   N    RP
Sbjct: 422  SNYLLSEDDSSVLNGNKDLPIPEGMVDSEVERRLKDANFAMQAMPTSTSN---NNFERRP 478

Query: 323  CDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHV-RLDCGIQTS 147
              S Q     + +    I  +                +P++K   P  H+   D  +Q S
Sbjct: 479  TMSLQ----HVASTSNMISQSPCQGPMSLNNKQYNHAVPSLK---PSGHICSSDSTLQCS 531

Query: 146  PPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLP 24
            P REEGEVPESE+DPDTRRRLLILQHGQDT +    DP  P
Sbjct: 532  PGREEGEVPESELDPDTRRRLLILQHGQDTREHGTIDPPPP 572


>gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Morus
            notabilis]
          Length = 998

 Score =  632 bits (1630), Expect = e-178
 Identities = 337/588 (57%), Positives = 429/588 (72%), Gaps = 9/588 (1%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYD--DPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPT-G 1584
            S VY G  LLGEV I P  +  D  +I+ +++ IR+SH S  S+RCPPLAVLHTI+ + G
Sbjct: 4    SVVYKGKELLGEVEIYPGENNIDHRIIDDLKE-IRISHFSPPSERCPPLAVLHTITSSFG 62

Query: 1583 VFIKVESK-ENQDNSLLKQLYITCLKEAKAAIVPL-QGRELLLVAMLSKSRVDQLPCFWG 1410
            V  K+ESK  +  +S L  L+ +C+ E K A++ L  G EL LVAM S++   Q PCFWG
Sbjct: 63   VCFKMESKTSHSQDSPLFLLHSSCVMENKTAVMSLGAGEELHLVAMYSRNSDKQYPCFWG 122

Query: 1409 YDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQ 1230
            ++V+S LYN+CLGMLNLRCL+IVFDLDETLIVANT+RSFED+I+A+QRK+S+E+DP R+ 
Sbjct: 123  FNVASGLYNSCLGMLNLRCLSIVFDLDETLIVANTMRSFEDRIEALQRKISSESDPQRMS 182

Query: 1229 GMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDK 1050
            GM+AEV+RYQ+D+++LKQY + DQ+VD NG V+K  +E +P  SD  Q I RPLIR+ +K
Sbjct: 183  GMLAEVKRYQDDKSILKQYVENDQVVD-NGRVIKVQSEVVPALSDNHQPIVRPLIRLHEK 241

Query: 1049 NMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLD 870
            N+I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD
Sbjct: 242  NIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 301

Query: 869  GESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHV 690
              S LIN   LL+R++CVK G RK+L NVF+ G CHPK+A+VIDDRLKVW+++DQPRVHV
Sbjct: 302  PHSNLINSKALLERIVCVKSGLRKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHV 361

Query: 689  VPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLP 510
            VP FAPYYAPQAE +  VPVLCVARNVACNVRGGFFK+FD+ LLQK+ EV YE +++ +P
Sbjct: 362  VPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDDGLLQKIPEVSYEDDIKHIP 421

Query: 509  PTPDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQ 339
              PDVSNYL ++DD    N N+DLP  +GMAD+E+E++L           +  SS I   
Sbjct: 422  SPPDVSNYLASEDDGSASNGNRDLPAFDGMADAEVERRL-------KEAISAASSAINPD 474

Query: 338  PVVRPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLP-IIPTVKPYMPQSHVRLDC 162
            P + P   T P      ++ G +P                P +   VKPY+      ++ 
Sbjct: 475  PRLSPLQYTVP------SSSGSVPPPTTQVSMMPFPNIQFPQVASVVKPYIGS----VES 524

Query: 161  GIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPAR 18
             +Q+SP REEGEVPESE+DPDTRRRLLILQHGQDT +    +P  PAR
Sbjct: 525  SLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTREHTPTEPPFPAR 572


>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
            [Vitis vinifera]
          Length = 860

 Score =  629 bits (1623), Expect = e-178
 Identities = 335/584 (57%), Positives = 417/584 (71%), Gaps = 5/584 (0%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFI 1575
            S VY GD ++GEV I PQ     L+      IR+SH S  S+RCPPLAVLHTI+  GV  
Sbjct: 4    SIVYEGDDVVGEVEIYPQNQGLELMK----EIRISHYSQPSERCPPLAVLHTITSCGVCF 59

Query: 1574 KVESKENQDNSL-LKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVS 1398
            K+ES + Q     L  L+ TC++E K A++ L   EL LVAM SK +  Q PCFWG++V+
Sbjct: 60   KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119

Query: 1397 SVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVA 1218
              LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+IDA+QRK++ E DP R+ GM A
Sbjct: 120  LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMAA 179

Query: 1217 EVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIF 1038
            EVRRYQ+DR +LKQYA+ DQ+V+ NG + K   E +P  SD  Q I RPLIR+Q+KN+I 
Sbjct: 180  EVRRYQDDRNILKQYAENDQVVE-NGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKNIIL 238

Query: 1037 TRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESR 858
            TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD ES 
Sbjct: 239  TRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESN 298

Query: 857  LINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPF 678
            LIN  ELLDR++CVK GSRK+L NVF+ G CHPK+A+VIDDRLKVW+++DQPRVHVVP F
Sbjct: 299  LINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAF 358

Query: 677  APYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPD 498
            APYYAPQAE +  + VLCVARNVACNVRGGFFK+FDE LLQ++ E+ YE +++ +   PD
Sbjct: 359  APYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIKDIRSAPD 418

Query: 497  VSNYLLTDDDLNV---NKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVR 327
            VSNYL+++DD +V   N+D P  +GMAD E+E+KL     + +S P+ ++S     P + 
Sbjct: 419  VSNYLVSEDDASVSNGNRDQPCFDGMADVEVERKL----KDAISAPSTVTS---LDPRLS 471

Query: 326  PCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLP-IIPTVKPYMPQSHVRLDCGIQT 150
            P     P    + A+ G  P  A             P     +KP  P+        +Q+
Sbjct: 472  P-----PLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLAPEP------TMQS 520

Query: 149  SPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPAR 18
            SP REEGEVPESE+DPDTRRRLLILQHGQDT +   +DP  P R
Sbjct: 521  SPAREEGEVPESELDPDTRRRLLILQHGQDTREHASSDPPFPVR 564


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  629 bits (1623), Expect = e-178
 Identities = 335/584 (57%), Positives = 417/584 (71%), Gaps = 5/584 (0%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFI 1575
            S VY GD ++GEV I PQ     L+      IR+SH S  S+RCPPLAVLHTI+  GV  
Sbjct: 4    SIVYEGDDVVGEVEIYPQNQGLELMK----EIRISHYSQPSERCPPLAVLHTITSCGVCF 59

Query: 1574 KVESKENQDNSL-LKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVS 1398
            K+ES + Q     L  L+ TC++E K A++ L   EL LVAM SK +  Q PCFWG++V+
Sbjct: 60   KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119

Query: 1397 SVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVA 1218
              LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+IDA+QRK++ E DP R+ GM A
Sbjct: 120  LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMAA 179

Query: 1217 EVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIF 1038
            EVRRYQ+DR +LKQYA+ DQ+V+ NG + K   E +P  SD  Q I RPLIR+Q+KN+I 
Sbjct: 180  EVRRYQDDRNILKQYAENDQVVE-NGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKNIIL 238

Query: 1037 TRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESR 858
            TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD ES 
Sbjct: 239  TRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESN 298

Query: 857  LINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPF 678
            LIN  ELLDR++CVK GSRK+L NVF+ G CHPK+A+VIDDRLKVW+++DQPRVHVVP F
Sbjct: 299  LINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAF 358

Query: 677  APYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPD 498
            APYYAPQAE +  + VLCVARNVACNVRGGFFK+FDE LLQ++ E+ YE +++ +   PD
Sbjct: 359  APYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDDIKDIRSAPD 418

Query: 497  VSNYLLTDDDLNV---NKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVR 327
            VSNYL+++DD +V   N+D P  +GMAD E+E+KL     + +S P+ ++S     P + 
Sbjct: 419  VSNYLVSEDDASVSNGNRDQPCFDGMADVEVERKL----KDAISAPSTVTS---LDPRLS 471

Query: 326  PCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLP-IIPTVKPYMPQSHVRLDCGIQT 150
            P     P    + A+ G  P  A             P     +KP  P+        +Q+
Sbjct: 472  P-----PLQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLAPEP------TMQS 520

Query: 149  SPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPAR 18
            SP REEGEVPESE+DPDTRRRLLILQHGQDT +   +DP  P R
Sbjct: 521  SPAREEGEVPESELDPDTRRRLLILQHGQDTREHASSDPPFPVR 564


>ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like isoform X2 [Glycine max]
          Length = 929

 Score =  622 bits (1604), Expect = e-175
 Identities = 327/582 (56%), Positives = 427/582 (73%), Gaps = 3/582 (0%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFI 1575
            S VY G+ ++GEV++ P+ ++      +++ IR+SH S  S+RCPPLAVLHT++  GV  
Sbjct: 6    SVVYQGEVVVGEVDVYPEENNNYKNFHVKE-IRISHFSQPSERCPPLAVLHTVTSCGVCF 64

Query: 1574 KVESKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVSS 1395
            K+ESK  Q + L  QL+  C++E K A++PL G E+ LVAM S++ VD+ PCFWG+ V+ 
Sbjct: 65   KMESKTQQQDGLF-QLHSLCIRENKTAVMPLGGEEIHLVAMHSRN-VDR-PCFWGFIVAL 121

Query: 1394 VLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVAE 1215
             LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+IDA+QRK+++E DP R+ GM AE
Sbjct: 122  GLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQAE 181

Query: 1214 VRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIFT 1035
            V+RYQ+D+ +LKQYA+ DQ+VD NG V+K  +E +P  SD  Q I RPLIR+QDKN+I T
Sbjct: 182  VKRYQDDKNILKQYAENDQVVD-NGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNIILT 240

Query: 1034 RINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESRL 855
            RINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD +S L
Sbjct: 241  RINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNL 300

Query: 854  INHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPFA 675
            IN  ELL R++CVK G +K+L NVF+ G CHPK+A+VIDDRLKVW+++DQPRVHVVP FA
Sbjct: 301  INSKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFA 360

Query: 674  PYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPDV 495
            PYYAPQAE S  +PVLCVARNVACNVRGGFFKDFD+ LLQK+ ++ YE +++ +P  PDV
Sbjct: 361  PYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPSPPDV 420

Query: 494  SNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVRP 324
            SNYL+++DD    N ++D  L +GMAD+E+E+KL    +   ++P + ++ ++ +     
Sbjct: 421  SNYLVSEDDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIP-VTTANLDPR----- 474

Query: 323  CDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHVRLDCGIQTSP 144
              S Q T +P     G +P                P   T+   M Q+    +  + +SP
Sbjct: 475  LTSLQYTMVP----SGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQA-APSEPSLHSSP 529

Query: 143  PREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPAR 18
             REEGEVPESE+DPDTRRRLLILQHGQDT     A+P  P R
Sbjct: 530  AREEGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVR 571


>ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like isoform X1 [Glycine max]
          Length = 956

 Score =  622 bits (1604), Expect = e-175
 Identities = 327/582 (56%), Positives = 427/582 (73%), Gaps = 3/582 (0%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFI 1575
            S VY G+ ++GEV++ P+ ++      +++ IR+SH S  S+RCPPLAVLHT++  GV  
Sbjct: 6    SVVYQGEVVVGEVDVYPEENNNYKNFHVKE-IRISHFSQPSERCPPLAVLHTVTSCGVCF 64

Query: 1574 KVESKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVSS 1395
            K+ESK  Q + L  QL+  C++E K A++PL G E+ LVAM S++ VD+ PCFWG+ V+ 
Sbjct: 65   KMESKTQQQDGLF-QLHSLCIRENKTAVMPLGGEEIHLVAMHSRN-VDR-PCFWGFIVAL 121

Query: 1394 VLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVAE 1215
             LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+IDA+QRK+++E DP R+ GM AE
Sbjct: 122  GLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQAE 181

Query: 1214 VRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIFT 1035
            V+RYQ+D+ +LKQYA+ DQ+VD NG V+K  +E +P  SD  Q I RPLIR+QDKN+I T
Sbjct: 182  VKRYQDDKNILKQYAENDQVVD-NGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNIILT 240

Query: 1034 RINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESRL 855
            RINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD +S L
Sbjct: 241  RINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNL 300

Query: 854  INHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPFA 675
            IN  ELL R++CVK G +K+L NVF+ G CHPK+A+VIDDRLKVW+++DQPRVHVVP FA
Sbjct: 301  INSKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFA 360

Query: 674  PYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPDV 495
            PYYAPQAE S  +PVLCVARNVACNVRGGFFKDFD+ LLQK+ ++ YE +++ +P  PDV
Sbjct: 361  PYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPSPPDV 420

Query: 494  SNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVRP 324
            SNYL+++DD    N ++D  L +GMAD+E+E+KL    +   ++P + ++ ++ +     
Sbjct: 421  SNYLVSEDDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIP-VTTANLDPR----- 474

Query: 323  CDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHVRLDCGIQTSP 144
              S Q T +P     G +P                P   T+   M Q+    +  + +SP
Sbjct: 475  LTSLQYTMVP----SGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQA-APSEPSLHSSP 529

Query: 143  PREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPAR 18
             REEGEVPESE+DPDTRRRLLILQHGQDT     A+P  P R
Sbjct: 530  AREEGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVR 571


>gb|EOY28304.1| C-terminal domain phosphatase-like 1 isoform 3 [Theobroma cacao]
          Length = 870

 Score =  619 bits (1595), Expect = e-174
 Identities = 334/602 (55%), Positives = 431/602 (71%), Gaps = 25/602 (4%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQY-----------DDPLLINGIRDT---IRVSHLSAQSDRCPP 1617
            S VY G+ +LGEV I PQ            +D   I  + +    IR+ +L+  S+RCPP
Sbjct: 7    SVVYRGEEVLGEVEIYPQQQLQQQQQLREEEDERKIMVMEEEMKEIRIEYLTQGSERCPP 66

Query: 1616 LAVLHTISPTGVFIKVESKEN------QDNSLLKQLYITCLKEAKAAIVPLQGRELLLVA 1455
            LAVLHTI+ +G+  K+ES ++      QD+  L  L+  C+++ K A++P+   EL LVA
Sbjct: 67   LAVLHTITSSGICFKMESSKDNNYSSSQDSPPLHLLHSECIRDNKTAVMPMGDCELHLVA 126

Query: 1454 MLSKSRVDQLPCFWGYDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDA 1275
            M S++     PCFWG++VS  LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A
Sbjct: 127  MYSRN--SDRPCFWGFNVSRGLYDSCLLMLNLRCLGIVFDLDETLIVANTMRSFEDRIEA 184

Query: 1274 IQRKLSAETDPLRVQGMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSD 1095
            +QRK++ E DP RV GMVAE++RYQ+D+A+LKQYA+ DQ+V+ NG V+K  +E +P  SD
Sbjct: 185  LQRKMTTEVDPQRVAGMVAEMKRYQDDKAILKQYAENDQVVE-NGKVIKIQSEVVPALSD 243

Query: 1094 RGQSISRPLIRIQDKNMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICT 915
              Q I RPLIR+Q+KN+I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CT
Sbjct: 244  NHQPIIRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCT 303

Query: 914  MSERDYALEMWRLLDGESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDD 735
            M+ERDYALEMWRLLD ES LIN  ELLDR++CVK GSRK+L NVF+ G CHPK+A+VIDD
Sbjct: 304  MAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDD 363

Query: 734  RLKVWEDRDQPRVHVVPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQ 555
            RLKVW+++DQPRVHVVP FAPYYAPQAE +  +PVLCVARNVACNVRGGFF++FDE LLQ
Sbjct: 364  RLKVWDEKDQPRVHVVPAFAPYYAPQAEANNTIPVLCVARNVACNVRGGFFREFDEGLLQ 423

Query: 554  KLSEVVYEFNVESLPPTPDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETN 384
            ++ E+ YE +++ +P  PDV NYL+++DD   LN NKD  L +GMAD+E+E++L      
Sbjct: 424  RIPEISYEDDIKDIPSPPDVGNYLVSEDDTSALNGNKDPLLFDGMADAEVERRL----KE 479

Query: 383  QVSLPNIISSGIEN-QPVVRPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPI-I 210
             +S  + +SS   N  P + P  S Q T   + ++   IP +A             P+  
Sbjct: 480  AISATSTVSSAAINLDPRLTP--SLQYT---MPSSSSSIPPSASQPSIVSFSNMQFPLAA 534

Query: 209  PTVKPYMPQSHVRLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPG 30
            P VKP  P +    +  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQDT      +P 
Sbjct: 535  PVVKPVAPVAVP--EPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHTPPEPA 592

Query: 29   LP 24
             P
Sbjct: 593  FP 594


>gb|EOY28303.1| C-terminal domain phosphatase-like 1 isoform 2 [Theobroma cacao]
          Length = 984

 Score =  619 bits (1595), Expect = e-174
 Identities = 334/602 (55%), Positives = 431/602 (71%), Gaps = 25/602 (4%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQY-----------DDPLLINGIRDT---IRVSHLSAQSDRCPP 1617
            S VY G+ +LGEV I PQ            +D   I  + +    IR+ +L+  S+RCPP
Sbjct: 7    SVVYRGEEVLGEVEIYPQQQLQQQQQLREEEDERKIMVMEEEMKEIRIEYLTQGSERCPP 66

Query: 1616 LAVLHTISPTGVFIKVESKEN------QDNSLLKQLYITCLKEAKAAIVPLQGRELLLVA 1455
            LAVLHTI+ +G+  K+ES ++      QD+  L  L+  C+++ K A++P+   EL LVA
Sbjct: 67   LAVLHTITSSGICFKMESSKDNNYSSSQDSPPLHLLHSECIRDNKTAVMPMGDCELHLVA 126

Query: 1454 MLSKSRVDQLPCFWGYDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDA 1275
            M S++     PCFWG++VS  LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A
Sbjct: 127  MYSRN--SDRPCFWGFNVSRGLYDSCLLMLNLRCLGIVFDLDETLIVANTMRSFEDRIEA 184

Query: 1274 IQRKLSAETDPLRVQGMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSD 1095
            +QRK++ E DP RV GMVAE++RYQ+D+A+LKQYA+ DQ+V+ NG V+K  +E +P  SD
Sbjct: 185  LQRKMTTEVDPQRVAGMVAEMKRYQDDKAILKQYAENDQVVE-NGKVIKIQSEVVPALSD 243

Query: 1094 RGQSISRPLIRIQDKNMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICT 915
              Q I RPLIR+Q+KN+I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CT
Sbjct: 244  NHQPIIRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCT 303

Query: 914  MSERDYALEMWRLLDGESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDD 735
            M+ERDYALEMWRLLD ES LIN  ELLDR++CVK GSRK+L NVF+ G CHPK+A+VIDD
Sbjct: 304  MAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDD 363

Query: 734  RLKVWEDRDQPRVHVVPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQ 555
            RLKVW+++DQPRVHVVP FAPYYAPQAE +  +PVLCVARNVACNVRGGFF++FDE LLQ
Sbjct: 364  RLKVWDEKDQPRVHVVPAFAPYYAPQAEANNTIPVLCVARNVACNVRGGFFREFDEGLLQ 423

Query: 554  KLSEVVYEFNVESLPPTPDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETN 384
            ++ E+ YE +++ +P  PDV NYL+++DD   LN NKD  L +GMAD+E+E++L      
Sbjct: 424  RIPEISYEDDIKDIPSPPDVGNYLVSEDDTSALNGNKDPLLFDGMADAEVERRL----KE 479

Query: 383  QVSLPNIISSGIEN-QPVVRPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPI-I 210
             +S  + +SS   N  P + P  S Q T   + ++   IP +A             P+  
Sbjct: 480  AISATSTVSSAAINLDPRLTP--SLQYT---MPSSSSSIPPSASQPSIVSFSNMQFPLAA 534

Query: 209  PTVKPYMPQSHVRLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPG 30
            P VKP  P +    +  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQDT      +P 
Sbjct: 535  PVVKPVAPVAVP--EPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHTPPEPA 592

Query: 29   LP 24
             P
Sbjct: 593  FP 594


>gb|EOY28302.1| C-terminal domain phosphatase-like 1 isoform 1 [Theobroma cacao]
          Length = 978

 Score =  619 bits (1595), Expect = e-174
 Identities = 334/602 (55%), Positives = 431/602 (71%), Gaps = 25/602 (4%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQY-----------DDPLLINGIRDT---IRVSHLSAQSDRCPP 1617
            S VY G+ +LGEV I PQ            +D   I  + +    IR+ +L+  S+RCPP
Sbjct: 7    SVVYRGEEVLGEVEIYPQQQLQQQQQLREEEDERKIMVMEEEMKEIRIEYLTQGSERCPP 66

Query: 1616 LAVLHTISPTGVFIKVESKEN------QDNSLLKQLYITCLKEAKAAIVPLQGRELLLVA 1455
            LAVLHTI+ +G+  K+ES ++      QD+  L  L+  C+++ K A++P+   EL LVA
Sbjct: 67   LAVLHTITSSGICFKMESSKDNNYSSSQDSPPLHLLHSECIRDNKTAVMPMGDCELHLVA 126

Query: 1454 MLSKSRVDQLPCFWGYDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDA 1275
            M S++     PCFWG++VS  LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A
Sbjct: 127  MYSRN--SDRPCFWGFNVSRGLYDSCLLMLNLRCLGIVFDLDETLIVANTMRSFEDRIEA 184

Query: 1274 IQRKLSAETDPLRVQGMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSD 1095
            +QRK++ E DP RV GMVAE++RYQ+D+A+LKQYA+ DQ+V+ NG V+K  +E +P  SD
Sbjct: 185  LQRKMTTEVDPQRVAGMVAEMKRYQDDKAILKQYAENDQVVE-NGKVIKIQSEVVPALSD 243

Query: 1094 RGQSISRPLIRIQDKNMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICT 915
              Q I RPLIR+Q+KN+I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CT
Sbjct: 244  NHQPIIRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCT 303

Query: 914  MSERDYALEMWRLLDGESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDD 735
            M+ERDYALEMWRLLD ES LIN  ELLDR++CVK GSRK+L NVF+ G CHPK+A+VIDD
Sbjct: 304  MAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDD 363

Query: 734  RLKVWEDRDQPRVHVVPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQ 555
            RLKVW+++DQPRVHVVP FAPYYAPQAE +  +PVLCVARNVACNVRGGFF++FDE LLQ
Sbjct: 364  RLKVWDEKDQPRVHVVPAFAPYYAPQAEANNTIPVLCVARNVACNVRGGFFREFDEGLLQ 423

Query: 554  KLSEVVYEFNVESLPPTPDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETN 384
            ++ E+ YE +++ +P  PDV NYL+++DD   LN NKD  L +GMAD+E+E++L      
Sbjct: 424  RIPEISYEDDIKDIPSPPDVGNYLVSEDDTSALNGNKDPLLFDGMADAEVERRL----KE 479

Query: 383  QVSLPNIISSGIEN-QPVVRPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPI-I 210
             +S  + +SS   N  P + P  S Q T   + ++   IP +A             P+  
Sbjct: 480  AISATSTVSSAAINLDPRLTP--SLQYT---MPSSSSSIPPSASQPSIVSFSNMQFPLAA 534

Query: 209  PTVKPYMPQSHVRLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPG 30
            P VKP  P +    +  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQDT      +P 
Sbjct: 535  PVVKPVAPVAVP--EPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHTPPEPA 592

Query: 29   LP 24
             P
Sbjct: 593  FP 594


>gb|EMJ15747.1| hypothetical protein PRUPE_ppa000988mg [Prunus persica]
          Length = 940

 Score =  617 bits (1592), Expect = e-174
 Identities = 330/590 (55%), Positives = 427/590 (72%), Gaps = 11/590 (1%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPL-----LINGIRDTIRVSHLSAQSDRCPPLAVLHTISP 1590
            S VY G+ LLGEV I P+ ++       L++ +++ IR+S+ S  S+RCPP+AVLHTIS 
Sbjct: 4    SVVYKGEELLGEVEIYPEENENKNKNKNLVDELKE-IRISYFSQSSERCPPVAVLHTISS 62

Query: 1589 TGVFIKVESKENQDNSL-LKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFW 1413
             GV  K+ESK +Q     L  L+ +C+ E K A++PL G EL LVAM S++   + PCFW
Sbjct: 63   HGVCFKMESKTSQSQDTPLFLLHSSCVMENKTAVMPLGGEELHLVAMRSRNGDKRYPCFW 122

Query: 1412 GYDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRV 1233
            G+ V+  LYN+CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A+QRK+S+E DP R+
Sbjct: 123  GFSVAPGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKISSEVDPQRI 182

Query: 1232 QGMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQD 1053
             GM+AE++RYQ+D+ +LKQYA+ DQ+V+ NG V+K  +E +P  SD  Q I RPLIR+ +
Sbjct: 183  SGMLAEIKRYQDDKFILKQYAENDQVVE-NGRVIKTQSEAVPALSDNHQPIIRPLIRLHE 241

Query: 1052 KNMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLL 873
            KN+I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLL
Sbjct: 242  KNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 301

Query: 872  DGESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVH 693
            D +S LIN  +LLDR++CVK GSRK+L NVF+   CHPK+A+VIDDRLKVW+DRDQPRVH
Sbjct: 302  DPDSNLINSNKLLDRIVCVKSGSRKSLFNVFQESLCHPKMALVIDDRLKVWDDRDQPRVH 361

Query: 692  VVPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESL 513
            VVP FAPYYAPQAE +  VPVLCVARNVACNVRGGFF++FD+ LLQK+ EV YE +++ +
Sbjct: 362  VVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFREFDDSLLQKIPEVFYEDDIKDV 421

Query: 512  PPTPDVSNYLLTDDD---LNVNKDLPLP-EGMADSELEKKLGPQETNQVSLPNIISSGIE 345
             P+PDVSNYL+++DD   LN N+D PLP +G+ D E+E+++  + T   S+ + + + I+
Sbjct: 422  -PSPDVSNYLVSEDDSSALNGNRD-PLPFDGITDVEVERRM-KEATPAASMVSSVFTSID 478

Query: 344  NQPVVRPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHV-RL 168
              P + P   T P             L+ P           +          P  HV   
Sbjct: 479  --PRLAPLQYTVPP---------SSTLSLPTTQPSVMSFPSIQFPQAASLVKPLGHVGSA 527

Query: 167  DCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPAR 18
            +  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQDT     ++P  P R
Sbjct: 528  EPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDQPPSEPPFPVR 577


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  617 bits (1591), Expect = e-174
 Identities = 330/592 (55%), Positives = 419/592 (70%), Gaps = 8/592 (1%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPLLINGIRDT-----IRVSHLSAQSDRCPPLAVLHTISP 1590
            S VY G+ ++GEV++ P+ ++               IR+SH S  S+RCPPLAVLHT++ 
Sbjct: 4    SVVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHTVTS 63

Query: 1589 TGVFIKVESKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWG 1410
             GV  K+ESK  Q + L  QL+  C++E K A++PL G E+ LVAM   SR D  PCFWG
Sbjct: 64   CGVCFKMESKTQQQDGLF-QLHSLCIRENKTAVMPLGGEEIHLVAM--HSRNDDRPCFWG 120

Query: 1409 YDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQ 1230
            + V+  LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+IDA+QRK+++E DP R+ 
Sbjct: 121  FIVTLGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRIS 180

Query: 1229 GMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDK 1050
            GM AEV+RY +D+ +LKQYA+ DQ+VD NG V+K  +E +P  SD  Q I RPLIR+QDK
Sbjct: 181  GMQAEVKRYLDDKNILKQYAENDQVVD-NGRVIKVQSEIVPALSDSHQPIVRPLIRLQDK 239

Query: 1049 NMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLD 870
            N+I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD
Sbjct: 240  NIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD 299

Query: 869  GESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHV 690
             +S LIN  ELL R++CVK G +K+L NVF+ G C PK+A+VIDDRLKVW++RDQPRVHV
Sbjct: 300  PDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGSCDPKMALVIDDRLKVWDERDQPRVHV 359

Query: 689  VPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLP 510
            VP FAPYYAPQAE S  +PVLCVARNVACNVRGGFFKDFD+ LLQK+ ++ YE +++ +P
Sbjct: 360  VPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDVP 419

Query: 509  PTPDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQ 339
              PDVSNYL+++DD    N N+D  L +GMAD+E+E+KL        + P + ++ ++ +
Sbjct: 420  SPPDVSNYLVSEDDGSISNGNRDPFLFDGMADAEVERKLKDALAAASTFP-VTTANLDPR 478

Query: 338  PVVRPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHVRLDCG 159
                   S Q T +P     G +P                P   T+   M Q+    D  
Sbjct: 479  -----LTSLQYTMVP----SGSVPPPTAQASMMPFPHVQFPQPATLVKPMGQA-APSDPS 528

Query: 158  IQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPARLQVTA 3
            + +SP REEGEVPESE+DPDTRRRLLILQHGQDT     A+P  P R  V A
Sbjct: 529  LHSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQA 580


>ref|XP_004293503.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Fragaria vesca subsp. vesca]
          Length = 955

 Score =  615 bits (1587), Expect = e-173
 Identities = 327/588 (55%), Positives = 417/588 (70%), Gaps = 8/588 (1%)
 Frame = -2

Query: 1748 VYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFIKV 1569
            VY G+ LLGEV + P+  +   I      IR+SH S  S+RCPP+AVLHTIS  GV  K+
Sbjct: 5    VYKGEELLGEVEVYPEELNNKKIWDELKEIRISHFSQSSERCPPVAVLHTISSNGVCFKM 64

Query: 1568 ESKEN----QDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDV 1401
            ESK +    QD S L  L+ +C+ E K A++ L   EL LVAM S++   Q PCFWG+ V
Sbjct: 65   ESKSSSSSSQDTSRLFLLHSSCIMENKTAVMNLGVEELHLVAMYSRNNQKQHPCFWGFSV 124

Query: 1400 SSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMV 1221
            SS LY++CLGMLNLRCL IVFDLDETLIVANT+RSFED+I+ +QRK+  E D  R+ GM 
Sbjct: 125  SSGLYSSCLGMLNLRCLGIVFDLDETLIVANTMRSFEDRIEGLQRKIQCEVDAQRISGMQ 184

Query: 1220 AEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMI 1041
            AE++RYQ+D+ +LKQYA+ DQ+V+ NG V+K  +E +P  SD  Q I RPLIR+Q+KN+I
Sbjct: 185  AEIKRYQDDKFILKQYAENDQVVE-NGRVIKTQSEVVPALSDSHQPIIRPLIRLQEKNII 243

Query: 1040 FTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGES 861
             TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD ES
Sbjct: 244  LTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPES 303

Query: 860  RLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPP 681
             LIN  +LLDR++CVK G +K+L NVF+   CHPK+A+VIDDRLKVW+DRDQPRVHVVP 
Sbjct: 304  NLINANKLLDRIVCVKSGLKKSLFNVFQESLCHPKMALVIDDRLKVWDDRDQPRVHVVPA 363

Query: 680  FAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTP 501
            FAPYYAPQAE +  VPVLCVARNVAC+VRGGFF++FD+ LLQK+ E+ YE N++    +P
Sbjct: 364  FAPYYAPQAEANNAVPVLCVARNVACSVRGGFFREFDDSLLQKIPEIFYEDNIKDF-SSP 422

Query: 500  DVSNYLLTDDDL---NVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVV 330
            DVSN+L+++DD    N N+D    +GMAD+E+E++L    +   + P + S+   N P +
Sbjct: 423  DVSNFLVSEDDASASNGNRDQLPFDGMADAEVERRLKEATS---AAPTVSSAVSNNDPRL 479

Query: 329  RPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHV-RLDCGIQ 153
                 T    +PL +      ++ P           +    +     P  HV   D G+ 
Sbjct: 480  ASLQYT----VPLSST-----VSLPTNQPSMMPFHNVQFPQSASLVKPLGHVGPADLGLH 530

Query: 152  TSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPARLQV 9
            +SP REEGEVPESE+DPDTRRRLLILQHGQDT +   ++P  P R QV
Sbjct: 531  SSPAREEGEVPESELDPDTRRRLLILQHGQDTRESVPSEPSFPVRPQV 578


>ref|XP_006347069.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Solanum tuberosum]
          Length = 953

 Score =  615 bits (1586), Expect = e-173
 Identities = 332/591 (56%), Positives = 421/591 (71%), Gaps = 16/591 (2%)
 Frame = -2

Query: 1748 VYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFIKV 1569
            +Y G+ L+GEV I   Y +  ++ G +  IR+SH S  S+RCPPLAVLHT++ TG+  K+
Sbjct: 8    LYEGERLVGEVEI---YCEKGVLWGEK-VIRISHYSPSSERCPPLAVLHTVT-TGLSFKL 62

Query: 1568 E---SKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVS 1398
            E   SK    +S L  L+ TCL++ K A++ L   EL LVAM SK+   Q PCFWG+ V+
Sbjct: 63   EPTKSKPLTQDSPLTLLHSTCLRDNKTAVMSLGREELHLVAMQSKNIGGQCPCFWGFKVA 122

Query: 1397 SVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVA 1218
            S LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A+QRK+++E+DP R   M+A
Sbjct: 123  SGLYDSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSESDPQRASVMLA 182

Query: 1217 EVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIF 1038
            EV+RYQED+ +LKQYA+ DQ+VD NG V+K+ +E  P  SD  Q I RPLIR+QD+N+I 
Sbjct: 183  EVKRYQEDKIILKQYAENDQVVD-NGKVIKSQSEVFPALSDNHQPIVRPLIRLQDRNIIL 241

Query: 1037 TRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESR 858
            TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD +S 
Sbjct: 242  TRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSN 301

Query: 857  LINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPF 678
            LIN  ELLDR++CVK G RK+L NVF+ G CHPK+A+VIDDRLKVW+D+DQPRVHVVP F
Sbjct: 302  LINSQELLDRIVCVKSGLRKSLFNVFQDGNCHPKMALVIDDRLKVWDDKDQPRVHVVPAF 361

Query: 677  APYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPD 498
            APY+APQAE +  VPVLCVARNVACNVRGGFFKDFDE LLQ++SEV YE +++ +P  PD
Sbjct: 362  APYFAPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISEVAYEDDIKQVPSAPD 421

Query: 497  VSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVR 327
            VSNYL+++DD   +N NKD    +GMADSE+E++L        S+P+ ++          
Sbjct: 422  VSNYLISEDDPSAVNGNKDSLGFDGMADSEVERRLKEAMLASTSVPSQMT---------- 471

Query: 326  PCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHVRL------- 168
               +  P  +P         L  P            P++P    ++PQ    L       
Sbjct: 472  ---NLDPRLVP--------ALQYPVPPVISQPSIQSPVVPFPTQHLPQVTSVLKSSVTQI 520

Query: 167  ---DCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLP 24
               D  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQDT     ++P  P
Sbjct: 521  SPQDTSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDQVSSEPKFP 571


>ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Populus trichocarpa]
            gi|550340277|gb|EEE85528.2| hypothetical protein
            POPTR_0004s04010g [Populus trichocarpa]
          Length = 996

 Score =  615 bits (1586), Expect = e-173
 Identities = 335/613 (54%), Positives = 425/613 (69%), Gaps = 34/613 (5%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDP----------LLINGIRDTIRVSHLSAQSDRCPPLAVL 1605
            S VY GD LLGEV I  Q               +I+ I   IR+SH S  S+RCPPLAVL
Sbjct: 4    SVVYKGDELLGEVEIYAQEQQQEEEENKNKKKRVIDEIVKEIRISHFSQTSERCPPLAVL 63

Query: 1604 HTISPTGVFIKVE-------SKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLS 1446
            HTI+  GV  K+E       +K +Q  S L  L+ +C++E K A++ L G EL LVAM S
Sbjct: 64   HTITSIGVCFKMEESTSSSTTKISQQESPLHLLHSSCIQENKTAVMHLGGEELHLVAMPS 123

Query: 1445 KSRVDQLPCFWGYDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQR 1266
            +S   Q PCFWG+ V+  LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+IDA+QR
Sbjct: 124  RSNERQHPCFWGFSVAPGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQR 183

Query: 1265 KLSAETDPLRVQGMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQ 1086
            K+S E DP R+ GM++EV+RY +D+ +LKQY + DQ+V+ NG V+K  +E +P  SD  Q
Sbjct: 184  KISTEVDPQRILGMLSEVKRYHDDKNILKQYVENDQVVE-NGKVIKTQSEVVPALSDNHQ 242

Query: 1085 SISRPLIRIQDKNMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSE 906
             + RPLIR+Q+KN+I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+E
Sbjct: 243  PMVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAE 302

Query: 905  RDYALEMWRLLDGESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLK 726
            RDYALEMWRLLD ES LIN  ELLDR++CVK G RK+L NVF+ G CHPK+A+VIDDRLK
Sbjct: 303  RDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDDRLK 362

Query: 725  VWEDRDQPRVHVVPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLS 546
            VW++RDQ RVHVVP FAPYYAPQAE +  VPVLCVARNVACNVRGGFFK+FDE LLQK+ 
Sbjct: 363  VWDERDQSRVHVVPAFAPYYAPQAEVNNAVPVLCVARNVACNVRGGFFKEFDEGLLQKIP 422

Query: 545  EVVYEFNVESLPPTPDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVS 375
            EV YE + +++P  PDVSNYL+++DD   +N N+D    +GMAD+E+E++L    +   +
Sbjct: 423  EVAYEDDTDNIPSPPDVSNYLVSEDDASAVNGNRDQLSFDGMADAEVERQLKEAVSASSA 482

Query: 374  LPNIISSGIEN---------QPVVRPCDSTQPTFIP-LVANHGRIPLAAPXXXXXXXXXX 225
            + + I S + +         Q  +    S+ PT  P ++A+   +P   P          
Sbjct: 483  ILSTIPSTVSSLDPRLLQSLQYTIASSSSSMPTSQPSMLASQQPMPALQPPKPPSQLSMT 542

Query: 224  XLP--IIPTVKPYMPQ--SHVRLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDT 57
              P    P V P + Q    V  +  +Q+SP REEGEVPESE+DPDTRRRLLILQHG D+
Sbjct: 543  PFPNTQFPQVAPSVKQLGQVVPPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGHDS 602

Query: 56   GKFNGADPGLPAR 18
                 ++   PAR
Sbjct: 603  RDNAPSESPFPAR 615


>ref|XP_006467834.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Citrus sinensis]
          Length = 957

 Score =  613 bits (1582), Expect = e-173
 Identities = 335/595 (56%), Positives = 422/595 (70%), Gaps = 16/595 (2%)
 Frame = -2

Query: 1745 YHGDALLGEVNIMPQY-----DDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGV 1581
            Y G  +LGEV I PQ      +       + D IR+S+ S  S+RCPPLAVLHTI+ +G+
Sbjct: 7    YLGKEILGEVEIYPQQQGEGGEGEEKNKKVFDEIRISYFSEASERCPPLAVLHTITASGI 66

Query: 1580 FIKVESKENQDNSLLKQLYITCLKEAKAAIVPLQ-GRELLLVAMLSKSRVDQLPCFWGYD 1404
              K+ESK + DN  L  L+ +C++E K A++PL    EL LVAM S++   Q PCFW + 
Sbjct: 67   CFKMESKSS-DNIQLHLLHSSCIRENKTAVMPLGLTEELHLVAMYSRNNEKQYPCFWAFS 125

Query: 1403 VSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGM 1224
            V S LYN+CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A+ RK+S E DP R+ GM
Sbjct: 126  VGSGLYNSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKISTEVDPQRIAGM 185

Query: 1223 VAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNM 1044
             AEV+RYQ+D+ +LKQYA+ DQ V+ NG V+K  +E +P  SD  Q++ RPLIR+Q+KN+
Sbjct: 186  QAEVKRYQDDKNILKQYAENDQ-VNENGKVIKVQSEVVPALSDSHQALVRPLIRLQEKNI 244

Query: 1043 IFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGE 864
            I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD E
Sbjct: 245  ILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 304

Query: 863  SRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVP 684
            S LIN  ELLDR++CVK GSRK+L NVF+ G CHPK+A+VIDDRLKVW+D+DQPRVHVVP
Sbjct: 305  SNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDRLKVWDDKDQPRVHVVP 364

Query: 683  PFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPT 504
             FAPYYAPQAE +  +PVLCVARN+ACNVRGGFFK+FDE LLQ++ E+ YE +V+ +P  
Sbjct: 365  AFAPYYAPQAEANNAIPVLCVARNIACNVRGGFFKEFDEGLLQRIPEISYEDDVKDIPSP 424

Query: 503  PDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIEN-QP 336
            PDVSNYL+++DD    N  KD    +GMAD+E+E++L       ++    ISS + N  P
Sbjct: 425  PDVSNYLVSEDDAATANGIKDPLSFDGMADAEVERRL----KEAIAASATISSAVANLDP 480

Query: 335  VVRPCDSTQP-----TFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHV- 174
             + P   T P     T +P  +    +PLA              P    VKP     HV 
Sbjct: 481  RLAPFQYTMPSSSSTTTLP-TSQAAVMPLA---------NMQFPPATSLVKPL---GHVG 527

Query: 173  RLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPARLQV 9
              +  +Q+SP REEGEVPESE+DPDTRRRLLILQHG DT +   ++   PAR Q+
Sbjct: 528  PPEQSLQSSPAREEGEVPESELDPDTRRRLLILQHGMDTRENAPSEAPFPARTQM 582


>ref|XP_004232844.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Solanum lycopersicum]
          Length = 954

 Score =  613 bits (1582), Expect = e-173
 Identities = 330/591 (55%), Positives = 421/591 (71%), Gaps = 16/591 (2%)
 Frame = -2

Query: 1748 VYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFIKV 1569
            +Y G+ L+GEV +   Y +  ++ G +  IR+SH S  S+RCPPLAVLHT++ TG+  K+
Sbjct: 8    LYEGERLVGEVEM---YGEKGVVWGEK-LIRISHYSPSSERCPPLAVLHTVT-TGLSFKL 62

Query: 1568 E---SKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVS 1398
            E   SK    +S L  L+ TCL++ K A++ L   EL LVAM SK+   Q PCFWG+ V+
Sbjct: 63   EPTKSKPLTQDSPLTLLHSTCLRDNKTAVMSLGREELHLVAMQSKNIGGQCPCFWGFKVA 122

Query: 1397 SVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVA 1218
            S LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A+QRK+++E+DP R   M+A
Sbjct: 123  SGLYDSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSESDPQRASVMLA 182

Query: 1217 EVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIF 1038
            EV+RYQED+ +LKQYA+ DQ+VD NG V+++ +E  P  SD  Q I RPLIR+QD+N+I 
Sbjct: 183  EVKRYQEDKIILKQYAENDQVVD-NGKVIRSQSEVFPALSDNHQPIVRPLIRLQDRNIIL 241

Query: 1037 TRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESR 858
            TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD +S 
Sbjct: 242  TRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSN 301

Query: 857  LINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPF 678
            LIN  ELLDR++CVK G RK+L NVF+ G CHPK+A+VIDDRLKVW+D+DQPRVHVVP F
Sbjct: 302  LINSQELLDRIVCVKSGLRKSLFNVFQDGNCHPKMALVIDDRLKVWDDKDQPRVHVVPAF 361

Query: 677  APYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPD 498
            APY+APQAE +  VPVLCVARNVACNVRGGFFKDFDE LLQ++SEV YE +++ +P  PD
Sbjct: 362  APYFAPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISEVAYEDDIKQVPSAPD 421

Query: 497  VSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVR 327
            VSNYL+++DD   +N NKD    +GMADSE+E++L        S+P+ ++          
Sbjct: 422  VSNYLISEDDPSAVNGNKDSLGFDGMADSEVERRLKEAMLASTSVPSQMT---------- 471

Query: 326  PCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHVRL------- 168
               +  P  +P         L  P            P++P    ++PQ    L       
Sbjct: 472  ---NLDPRLVP--------ALQYPVPPVISQPSIQGPVVPFPTQHLPQVTSVLKSSVTQI 520

Query: 167  ---DCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLP 24
               D  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQDT     ++P  P
Sbjct: 521  SPQDTSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDQVSSEPKFP 571


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score =  613 bits (1582), Expect = e-173
 Identities = 331/588 (56%), Positives = 420/588 (71%), Gaps = 23/588 (3%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPL-----------------LINGIRDTIRVSHLSAQSDR 1626
            S VY GD LLGEV I  Q +  L                 +I+ I   IR+SH S  S+R
Sbjct: 4    SVVYKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEILKGIRISHFSQASER 63

Query: 1625 CPPLAVLHTISPTGVFIKVESKENQD-NSLLKQLYITCLKEAKAAIVPLQG-RELLLVAM 1452
            CPPLAVLHTI+  G+  K+ESK +   ++ L  L+ +C++E+K A+V LQG  EL LVAM
Sbjct: 64   CPPLAVLHTITTNGICFKMESKNSVSLDTPLHLLHSSCIQESKTAVVLLQGGEELHLVAM 123

Query: 1451 LSKSRVDQLPCFWGYDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAI 1272
             S++   Q PCFW +++SS LY++CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A+
Sbjct: 124  FSRNDERQYPCFWAFNISSGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEAL 183

Query: 1271 QRKLSAETDPLRVQGMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDR 1092
            QRK+S E DP R+ GM++EV+RYQ+D+ +LKQY D DQ+V+ NG V+K   E +P  SD 
Sbjct: 184  QRKISTELDPQRISGMLSEVKRYQDDKTILKQYVDNDQVVE-NGRVIKTQFEVVPALSDN 242

Query: 1091 GQSISRPLIRIQDKNMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTM 912
             Q+I RPLIR+Q++N+I TRINP IRDTSVLVRLRPAWEELR+YLT +GRKRFEVY+CTM
Sbjct: 243  HQTIVRPLIRLQERNIILTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTM 302

Query: 911  SERDYALEMWRLLDGESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDR 732
            +ERDYALEMWRLLD ES LIN  ELLDR++CVK G RK+L NVF+ G CHPK+A+VIDDR
Sbjct: 303  AERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDDR 362

Query: 731  LKVWEDRDQPRVHVVPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQK 552
            LKVW+++DQPRVHVVP FAPYYAPQAE +  VPVLCVARNVACNVRGGFFK+FDE LLQ+
Sbjct: 363  LKVWDEKDQPRVHVVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDEGLLQR 422

Query: 551  LSEVVYEFNVESLPPTPDVSNYLLTDDDL---NVNKDLPLPEGMADSELEKKLGPQETNQ 381
            + E+ +E ++  +P  PDVSNYL+ +DD    N N+D    +GMAD+E+EK+L    +  
Sbjct: 423  IPEISFEDDMNDIPSPPDVSNYLVPEDDAFTSNGNRDPLSFDGMADAEVEKRLKEAISIS 482

Query: 380  VSLPNIISSGIENQPVVRPCDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLP-IIPT 204
             + P+ +++   +  +V P   T       +A+   IP+              LP   P 
Sbjct: 483  SAFPSTVAN--LDARLVPPLQYT-------MASSSSIPVPTSQPAVVTFPSMQLPQAAPL 533

Query: 203  VKPYMPQSHVRLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQD 60
            VKP      V  +  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQD
Sbjct: 534  VKPL--GQVVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQD 579


>ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Cicer arietinum]
          Length = 951

 Score =  611 bits (1576), Expect = e-172
 Identities = 331/589 (56%), Positives = 421/589 (71%), Gaps = 5/589 (0%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGVFI 1575
            S VY G+ +LGEV+I P+ ++    N     IR+SH +  S+RC PLAVLHTI+ +GV  
Sbjct: 4    SLVYQGEVVLGEVDIYPEVNNN---NKNFKEIRISHFTQPSERCLPLAVLHTITSSGVCF 60

Query: 1574 KVESKENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAMLSKSRVDQLPCFWGYDVSS 1395
            K+ESK  Q + L   L+  C +E K A++PL G E+ LVAM S+S  +  PCFWGY V  
Sbjct: 61   KMESKTQQQDPLF-HLHNLCFRENKTAVMPLCGEEMHLVAMHSRS--NGRPCFWGYIVGM 117

Query: 1394 VLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGMVAE 1215
             LYN+CL MLNLRCL IVFDLDETLIVANT+RSFED+IDA+QRK+++E DP R+ GM AE
Sbjct: 118  GLYNSCLMMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQAE 177

Query: 1214 VRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNMIFT 1035
            V+RY ED+++LKQY + DQ+VD NG VLKA +E +P  SD  Q I RPLIR+ +KN+I T
Sbjct: 178  VKRYLEDKSILKQYVENDQVVD-NGKVLKAQSELVPALSDSHQPIVRPLIRLHEKNIILT 236

Query: 1034 RINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGESRL 855
            RINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD +S L
Sbjct: 237  RINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNL 296

Query: 854  INHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVPPFA 675
            IN  ELL R++CVK G +K+L NVF+ G CHPK+A+VIDDRLKVW+++DQPRVHVVP FA
Sbjct: 297  INSKELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFA 356

Query: 674  PYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPTPDV 495
            PYYAPQAE S  +PVLCVARNVACNVRGGFFKDFD+ LLQK+S++ YE N   + P PDV
Sbjct: 357  PYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKISQIAYENNTRDISPAPDV 416

Query: 494  SNYLLTDDDLN---VNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIENQPVVRP 324
            SNYL+++DD +    N+D    +GMAD+E+E+KL    +   ++P + ++ ++     R 
Sbjct: 417  SNYLVSEDDGSASYANRDPFAFDGMADAEVERKLKDAISAASAIP-MTTAKLD----PRL 471

Query: 323  CDSTQPTFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHVRLDCGIQTSP 144
              S Q T   +V+    +P AA                  VKP    +   L   + +SP
Sbjct: 472  TSSLQYT---MVSPGSVLPPAAQASMIPLPHTQFPQPATLVKPIGQVAPSEL--SLHSSP 526

Query: 143  PREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPAR--LQVTA 3
             REEGEVPESE+DPDTRRRLLILQHGQD      ++P  P +  +QV+A
Sbjct: 527  AREEGEVPESELDPDTRRRLLILQHGQDNRDHTSSEPPFPLKHPVQVSA 575


>ref|XP_006449302.1| hypothetical protein CICLE_v10014168mg [Citrus clementina]
            gi|557551913|gb|ESR62542.1| hypothetical protein
            CICLE_v10014168mg [Citrus clementina]
          Length = 957

 Score =  604 bits (1557), Expect = e-170
 Identities = 332/595 (55%), Positives = 420/595 (70%), Gaps = 16/595 (2%)
 Frame = -2

Query: 1745 YHGDALLGEVNIMPQY-----DDPLLINGIRDTIRVSHLSAQSDRCPPLAVLHTISPTGV 1581
            Y G  +LGEV I PQ      +       + D IR+S+ S  S+RCPPLAVLHTI+ +G+
Sbjct: 7    YLGKEILGEVEIYPQQQGEGGEGEEKNKKVFDEIRISYFSEASERCPPLAVLHTITASGI 66

Query: 1580 FIKVESKENQDNSLLKQLYITCLKEAKAAIVPLQ-GRELLLVAMLSKSRVDQLPCFWGYD 1404
              K+ESK + DN  L  L+ +C++E K A++ L    EL LVAM S++   Q PCFW + 
Sbjct: 67   CFKMESKSS-DNVQLHLLHSSCIRENKTAVMLLGLTEELHLVAMYSRNNEKQYPCFWAFS 125

Query: 1403 VSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQRKLSAETDPLRVQGM 1224
            V S LYN+CL MLNLRCL IVFDLDETLIVANT+RSFED+I+A+ RK+S E DP R+ GM
Sbjct: 126  VGSGLYNSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKISTEVDPQRIAGM 185

Query: 1223 VAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRGQSISRPLIRIQDKNM 1044
             AEV+RYQ+D+ +LKQYA+ DQ V+ NG V+K  +E +P  SD  Q++ RPLIR+Q+KN+
Sbjct: 186  QAEVKRYQDDKNILKQYAENDQ-VNENGKVIKVQSEVVPALSDSHQALVRPLIRLQEKNI 244

Query: 1043 IFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMSERDYALEMWRLLDGE 864
            I TRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+ERDYALEMWRLLD E
Sbjct: 245  ILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPE 304

Query: 863  SRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRLKVWEDRDQPRVHVVP 684
            S LIN  ELLDR++CVK GSRK+L NVF+ G CHPK+A+VIDDRLKVW+++DQ RVHVVP
Sbjct: 305  SNLINTKELLDRIVCVKSGSRKSLFNVFQDGTCHPKMALVIDDRLKVWDEKDQSRVHVVP 364

Query: 683  PFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKLSEVVYEFNVESLPPT 504
             FAPYYAPQAE +  +PVLCVARN+ACNVRGGFFK+FDE LLQ++ E+ YE +V+ +P  
Sbjct: 365  AFAPYYAPQAEANNAIPVLCVARNIACNVRGGFFKEFDEGLLQRIPEISYEDDVKEIPSP 424

Query: 503  PDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQVSLPNIISSGIEN-QP 336
            PDVSNYL+++DD    N  KD    +GMAD+E+E++L       ++    ISS + N  P
Sbjct: 425  PDVSNYLVSEDDAATANGIKDPLSFDGMADAEVERRL----KEAIAASATISSAVANLDP 480

Query: 335  VVRPCDSTQP-----TFIPLVANHGRIPLAAPXXXXXXXXXXXLPIIPTVKPYMPQSHV- 174
             + P   T P     T +P  +    +PLA              P    VKP     HV 
Sbjct: 481  RLAPFQYTMPSSSSTTTLP-TSQAAVMPLA---------NMQFPPATSLVKPL---GHVG 527

Query: 173  RLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKFNGADPGLPARLQV 9
              +  +Q+SP REEGEVPESE+DPDTRRRLLILQHG DT +   ++   PAR Q+
Sbjct: 528  PPEQCLQSSPAREEGEVPESELDPDTRRRLLILQHGMDTRENAPSEAPFPARTQM 582


>ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Populus trichocarpa]
            gi|550327613|gb|ERP55122.1| hypothetical protein
            POPTR_0011s04910g [Populus trichocarpa]
          Length = 990

 Score =  603 bits (1555), Expect = e-170
 Identities = 323/610 (52%), Positives = 419/610 (68%), Gaps = 31/610 (5%)
 Frame = -2

Query: 1754 SSVYHGDALLGEVNIMPQYDDP----------LLINGIRDTIRVSHLSAQSDRCPPLAVL 1605
            S VY G+ LLGEV I  Q               +I+ I   IR+SH S  S+RCPPLAVL
Sbjct: 4    SVVYKGEELLGEVEIYAQEQQQEEEENKNKRKRVIDEIVKGIRISHFSQASERCPPLAVL 63

Query: 1604 HTISPTGVFIKVESK--------ENQDNSLLKQLYITCLKEAKAAIVPLQGRELLLVAML 1449
            HTI+  GV  K+E           +Q  S L+ L+ +C++E K A++ L G EL LVAM 
Sbjct: 64   HTITSIGVCFKMEESTASSSTKISSQQESPLRLLHSSCIQENKTAVMLLGGEELHLVAMP 123

Query: 1448 SKSRVDQLPCFWGYDVSSVLYNACLGMLNLRCLAIVFDLDETLIVANTLRSFEDKIDAIQ 1269
            S+S   + PCFWG++V+S LY++CL MLNLRCL IVFDLDETLIVANT+RSFEDKI+A+Q
Sbjct: 124  SRSNERKHPCFWGFNVASGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDKIEALQ 183

Query: 1268 RKLSAETDPLRVQGMVAEVRRYQEDRAMLKQYADADQIVDSNGVVLKAVTEFIPPHSDRG 1089
            +K+S E D  R+  +++E++RYQ+D+ +LKQY + DQ+++ NG V+K   E +P  SD  
Sbjct: 184  KKISTEVDQQRILAIISEIKRYQDDKIILKQYVENDQVIE-NGKVIKTQFEVVPAASDNH 242

Query: 1088 QSISRPLIRIQDKNMIFTRINPNIRDTSVLVRLRPAWEELRTYLTLKGRKRFEVYICTMS 909
            Q + RPLIR+ +KN+IFTRINP IRDTSVLVRLRPAWE+LR+YLT +GRKRFEVY+CTM+
Sbjct: 243  QPLVRPLIRLPEKNIIFTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMA 302

Query: 908  ERDYALEMWRLLDGESRLINHGELLDRVLCVKPGSRKALGNVFRVGFCHPKLAMVIDDRL 729
            ERDYALEMWRLLD ES LIN  ELLDR++CV  GSRK+L NVF+ G CHPK+A+VIDDR+
Sbjct: 303  ERDYALEMWRLLDPESNLINSNELLDRIVCVSSGSRKSLFNVFQDGICHPKMALVIDDRM 362

Query: 728  KVWEDRDQPRVHVVPPFAPYYAPQAETSCPVPVLCVARNVACNVRGGFFKDFDEVLLQKL 549
             VW+++DQ RVHVVP FAPYYAPQAE +  VP+LCVARNVACNVRGGFFK+FDE LLQK+
Sbjct: 363  NVWDEKDQSRVHVVPAFAPYYAPQAEANNAVPILCVARNVACNVRGGFFKEFDEGLLQKI 422

Query: 548  SEVVYEFNVESLPPTPDVSNYLLTDDD---LNVNKDLPLPEGMADSELEKKLGPQETNQV 378
             EV YE +  ++P  PDVSNYL+++DD    N N+D P  +  AD+E+E++L    +   
Sbjct: 423  PEVAYEDDTSNIPSPPDVSNYLVSEDDASAANGNRDPPSFDSTADAEVERRLKEAVSASS 482

Query: 377  SLPNIISSGIEN---------QPVVRPCDSTQPTFIP-LVANHGRIPLAAPXXXXXXXXX 228
            ++P+ I S + +         Q  V    S  P   P ++A+   +P A+          
Sbjct: 483  TIPSTIPSTVSSLDPRLLQSLQYAVASSSSLMPASQPSMLASQQPVP-ASQTSMMPFPNT 541

Query: 227  XXLPIIPTVKPYMPQSHVRLDCGIQTSPPREEGEVPESEVDPDTRRRLLILQHGQDTGKF 48
                + P VK      H   +  +Q+SP REEGEVPESE+DPDTRRRLLILQHGQD+   
Sbjct: 542  QFPQVAPLVKQLGQVVHP--EPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDSRDN 599

Query: 47   NGADPGLPAR 18
              ++   PAR
Sbjct: 600  APSESPFPAR 609